Guide to the Human Genome
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Name: KRT33B Sequence: fasta or formatted (404aa) NCBI GI: 10337581
Description:

type I hair keratin 3B

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         22           2
 C cysteine            5.0         20           1
 D aspartate           3.5         14           2
 E glutamate          11.4         46           2
 F phenylalanine       2.0          8           1
 G glycine             2.2          9           1
 H histidine           0.7          3           1
 I isoleucine          3.5         14           2
 K lysine              3.0         12           1
 L leucine            12.4         50           2
 M methionine          0.7          3           1
 N asparagine          7.4         30           1
 P proline             4.0         16           2
 Q glutamine           8.2         33           3
 R arginine            7.2         29           2
 S serine              9.4         38           3
 T threonine           5.2         21           2
 V valine              5.2         21           2
 W tryptophan          0.5          2           1
 Y tyrosine            3.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   type I hair keratin 3B 
KRT33A                0.930   keratin 33A 
KRT31                 0.929   keratin 31 
KRT34                 0.850   keratin 34 
KRT35                 0.642   keratin 35 
KRT36                 0.640   keratin 36 
KRT32                 0.639   keratin 32 
KRT38                 0.594   keratin 38 
KRT37                 0.560   keratin 37 
KRT40                 0.556   type I hair keratin KA36 
KRT39                 0.536   type I hair keratin KA35 
KRT14                 0.448   keratin 14 
KRT17                 0.443   keratin 17 
KRT16                 0.439   keratin 16 
KRT19                 0.425   keratin 19 
KRT15                 0.421   keratin 15 
KRT13                 0.410   keratin 13 isoform a 
KRT13                 0.408   keratin 13 isoform b 
KRT10                 0.384   keratin 10 
KRT12                 0.380   keratin 12 
KRT20                 0.363   keratin 20 
KRT27                 0.347   keratin 27 
KRT28                 0.342   keratin 25D 
KRT24                 0.338   keratin 24 
KRT25                 0.337   keratin 25 
KRT18                 0.332   keratin 18 
KRT18                 0.332   keratin 18 
KRT9                  0.312   keratin 9 
KRT23                 0.304   keratin 23 
KRT26                 0.303   keratin 26 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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