Guide to the Human Genome
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Name: ACOT12 Sequence: fasta or formatted (555aa) NCBI GI: 18640736
Description:

acyl-CoA thioesterase 12

Referenced in:

Adipose Tissue

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         45           2
 C cysteine            2.0         11           1
 D aspartate           5.6         31           2
 E glutamate           6.8         38           3
 F phenylalanine       4.5         25           1
 G glycine             4.9         27           2
 H histidine           3.6         20           2
 I isoleucine          7.0         39           2
 K lysine              6.1         34           2
 L leucine             7.4         41           2
 M methionine          1.8         10           1
 N asparagine          3.1         17           2
 P proline             4.5         25           2
 Q glutamine           3.1         17           1
 R arginine            5.0         28           2
 S serine              8.1         45           2
 T threonine           5.8         32           2
 V valine              9.0         50           2
 W tryptophan          1.8         10           1
 Y tyrosine            1.8         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-CoA thioesterase 12 
ACOT11                0.434   thioesterase, adipose associated isoform BFIT2 [Homo...
ACOT11                0.415   thioesterase, adipose associated isoform BFIT1 [Homo...
ACOT7                 0.060   acyl-CoA thioesterase 7 isoform hBACHb 
ACOT7                 0.060   acyl-CoA thioesterase 7 isoform hBACHa 
ACOT7                 0.059   acyl-CoA thioesterase 7 isoform hBACHd 
ACOT7                 0.059   acyl-CoA thioesterase 7 isoform hBACHc 
ACOT9                 0.020   acyl-Coenzyme A thioesterase 2, mitochondrial isofor...
ACOT9                 0.020   acyl-Coenzyme A thioesterase 2, mitochondrial isofor...
STARD10               0.019   START domain containing 10 
STARD6                0.012   START domain containing protein 6 
STARD8                0.007   StAR-related lipid transfer (START) domain containi...
STARD8                0.007   StAR-related lipid transfer (START) domain containi...
STARD8                0.007   StAR-related lipid transfer (START) domain containin...
STARD7                0.007   START domain containing 7 
TTN                   0.005   titin isoform novex-2 
TTN                   0.005   titin isoform novex-1 
TTN                   0.005   titin isoform N2-B 
STARD13               0.005   StAR-related lipid transfer (START) domain containin...
STARD13               0.005   StAR-related lipid transfer (START) domain containin...
STARD13               0.005   StAR-related lipid transfer (START) domain containin...
KIAA1211              0.005   hypothetical protein LOC57482 
SIL1                  0.005   SIL1 protein precursor 
SIL1                  0.005   SIL1 protein precursor 
DMD                   0.004   dystrophin Dp427c isoform 
DMD                   0.004   dystrophin Dp260-2 isoform 
DMD                   0.004   dystrophin Dp260-1 isoform 
DMD                   0.004   dystrophin Dp427p2 isoform 
DMD                   0.004   dystrophin Dp427p1 isoform 
DMD                   0.004   dystrophin Dp427l isoform 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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