Guide to the Human Genome
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Name: GPI Sequence: fasta or formatted (558aa) NCBI GI: 18201905
Description:

glucose phosphate isomerase

Referenced in:

Glycolysis
Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         40           2
 C cysteine            0.7          4           1
 D aspartate           4.8         27           1
 E glutamate           5.7         32           2
 F phenylalanine       5.0         28           1
 G glycine             7.3         41           2
 H histidine           3.8         21           2
 I isoleucine          5.7         32           2
 K lysine              6.3         35           2
 L leucine             9.5         53           2
 M methionine          2.7         15           1
 N asparagine          5.0         28           1
 P proline             3.9         22           1
 Q glutamine           5.2         29           2
 R arginine            4.8         27           2
 S serine              5.2         29           2
 T threonine           6.6         37           2
 V valine              5.7         32           1
 W tryptophan          2.2         12           1
 Y tyrosine            2.5         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glucose phosphate isomerase 
ITCH                  0.011   itchy homolog E3 ubiquitin protein ligase 
RANBP17               0.006   RAN binding protein 17 
APOL1                 0.006   apolipoprotein L1 isoform c precursor 
APOL1                 0.006   apolipoprotein L1 isoform a precursor 
APOL1                 0.006   apolipoprotein L1 isoform b precursor 
APOL1                 0.006   apolipoprotein L1 isoform a precursor 
ABLIM3                0.004   actin binding LIM protein family, member 3 
ZNF587                0.004   zinc finger protein 587 
ZNF417                0.004   zinc finger protein 417 
ABLIM2                0.004   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.004   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.004   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.004   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.004   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.004   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.004   actin binding LIM protein family, member 2 isoform ...
ABLIM1                0.004   actin-binding LIM protein 1 isoform c 
ABLIM1                0.004   actin-binding LIM protein 1 isoform b 
ABLIM1                0.004   actin-binding LIM protein 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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