VPS16 9665

Name: VPS16	Sequence: fasta or formatted (695aa)		NCBI GI: 17978481
Description: vacuolar protein sorting 16 isoform 3		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [839aa] vacuolar protein sorting 16 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 72 3 C cysteine 2.2 15 1 D aspartate 5.8 40 2 E glutamate 6.6 46 3 F phenylalanine 3.0 21 2 G glycine 5.8 40 2 H histidine 2.4 17 1 I isoleucine 3.5 24 1 K lysine 5.9 41 2 L leucine 13.2 92 3 M methionine 2.0 14 1 N asparagine 2.6 18 1 P proline 4.0 28 2 Q glutamine 4.5 31 2 R arginine 6.9 48 2 S serine 5.8 40 2 T threonine 3.7 26 2 V valine 6.5 45 3 W tryptophan 1.9 13 2 Y tyrosine 3.5 24 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vacuolar protein sorting 16 isoform 3 VPS16 0.552 vacuolar protein sorting 16 isoform 1 C14orf133 0.017 hypothetical protein LOC63894 GOLGA4 0.007 golgi autoantigen, golgin subfamily a, 4 TYSND1 0.005 trypsin domain containing 1 isoform a CYP4X1 0.005 cytochrome P450, family 4, subfamily X, polypeptide ... TYSND1 0.004 trypsin domain containing 1 isoform b EXOC1 0.004 exocyst complex component 1 isoform 1 EXOC1 0.004 exocyst complex component 1 isoform 1 CCDC102A 0.004 coiled-coil domain containing 102A BSN 0.004 bassoon protein MYH11 0.004 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.004 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.004 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.004 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... NSFL1C 0.004 p47 protein isoform b NSFL1C 0.004 p47 protein isoform a NSFL1C 0.004 p47 protein isoform c EXOC1 0.004 exocyst complex component 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.