NCAPD2 9625

Name: NCAPD2	Sequence: fasta or formatted (1401aa)		NCBI GI: 178056552
Description: non-SMC condensin I complex, subunit D2		Referenced in: Small RNAs in RNA Processing Spindle, M phase, and Meiosis
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 116 3 C cysteine 1.8 25 2 D aspartate 4.6 64 2 E glutamate 8.3 116 3 F phenylalanine 3.6 50 2 G glycine 4.7 66 2 H histidine 2.4 33 2 I isoleucine 4.7 66 2 K lysine 5.8 81 3 L leucine 13.0 182 3 M methionine 2.8 39 2 N asparagine 3.1 43 2 P proline 5.2 73 2 Q glutamine 6.0 84 2 R arginine 6.0 84 3 S serine 6.4 89 2 T threonine 5.5 77 3 V valine 5.9 82 2 W tryptophan 0.6 8 1 Y tyrosine 1.6 23 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 non-SMC condensin I complex, subunit D2 NCAPD3 0.012 non-SMC condensin II complex, subunit D3 SPEG 0.004 SPEG complex locus XRCC6 0.004 ATP-dependent DNA helicase II, 70 kDa subunit C7orf27 0.004 hypothetical protein LOC221927 C18orf25 0.003 ARKadia-like 1 isoform b C18orf25 0.003 ARKadia-like 1 isoform a RASSF5 0.003 Ras association (RalGDS/AF-6) domain family 5 isofor... NOLC1 0.003 nucleolar and coiled-body phosphoprotein 1 PPIG 0.003 peptidylprolyl isomerase G MAST4 0.003 microtubule associated serine/threonine kinase fami... C18orf54 0.003 hypothetical protein LOC162681 FAM133B 0.003 hypothetical protein LOC257415 isoform 2 FAM133B 0.003 hypothetical protein LOC257415 isoform 1 PSME4 0.003 proteasome (prosome, macropain) activator subunit 4... RSF1 0.003 remodeling and spacing factor 1 RASSF5 0.003 Ras association (RalGDS/AF-6) domain family 5 isofor... RASSF5 0.003 Ras association (RalGDS/AF-6) domain family 5 isofor... B4GALNT1 0.003 beta-1,4-N-acetyl-galactosaminyl transferase 1 PDE4DIP 0.003 phosphodiesterase 4D interacting protein isoform 2 [... PDE4DIP 0.003 phosphodiesterase 4D interacting protein isoform 5 [... PDE4DIP 0.003 phosphodiesterase 4D interacting protein isoform 1 ... DDX60 0.003 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 PLEC1 0.003 plectin 1 isoform 11 PLEC1 0.003 plectin 1 isoform 10 PLEC1 0.003 plectin 1 isoform 8 PLEC1 0.003 plectin 1 isoform 7 PLEC1 0.003 plectin 1 isoform 6 PLEC1 0.003 plectin 1 isoform 3 PLEC1 0.003 plectin 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.