Guide to the Human Genome
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Name: WNT7B Sequence: fasta or formatted (349aa) NCBI GI: 17505193
Description:

wingless-type MMTV integration site family, member 7B precursor

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         28           2
 C cysteine            7.2         25           2
 D aspartate           2.9         10           1
 E glutamate           5.7         20           2
 F phenylalanine       4.3         15           1
 G glycine             8.6         30           2
 H histidine           2.0          7           1
 I isoleucine          4.0         14           2
 K lysine              6.0         21           2
 L leucine             6.0         21           2
 M methionine          1.7          6           1
 N asparagine          5.2         18           2
 P proline             2.3          8           1
 Q glutamine           4.9         17           1
 R arginine            8.0         28           2
 S serine              4.9         17           2
 T threonine           5.7         20           2
 V valine              6.9         24           2
 W tryptophan          2.0          7           1
 Y tyrosine            3.7         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   wingless-type MMTV integration site family, member 7... 
WNT7A                 0.811   wingless-type MMTV integration site family, member 7...
WNT2B                 0.460   wingless-type MMTV integration site family, member 2...
WNT2B                 0.460   wingless-type MMTV integration site family, member 2...
WNT4                  0.457   wingless-type MMTV integration site family, member 4...
WNT5B                 0.451   wingless-type MMTV integration site family, member 5...
WNT5B                 0.451   wingless-type MMTV integration site family, member 5...
LOC100289775          0.444   PREDICTED: hypothetical protein XP_002348164 
WNT5A                 0.443   wingless-type MMTV integration site family, member 5...
WNT2                  0.425   wingless-type MMTV integration site family member 2 p...
WNT3                  0.418   wingless-type MMTV integration site family, member 3...
WNT16                 0.416   wingless-type MMTV integration site family, member 1...
WNT16                 0.416   wingless-type MMTV integration site family, member 1...
WNT3A                 0.408   wingless-type MMTV integration site family, member 3...
WNT6                  0.364   wingless-type MMTV integration site family, member 6...
WNT1                  0.355   wingless-type MMTV integration site family, member 1 ...
WNT10A                0.352   wingless-type MMTV integration site family, member 1...
WNT10B                0.347   wingless-type MMTV integration site family, member 1...
WNT8B                 0.326   wingless-type MMTV integration site family, member ...
WNT11                 0.325   wingless-type MMTV integration site family, member 1...
WNT8A                 0.294   wingless-type MMTV integration site family, member 8...
WNT9A                 0.291   wingless-type MMTV integration site family, member 9...
WNT9B                 0.288   wingless-type MMTV integration site family, member 9...
LOC100293688          0.015   PREDICTED: similar to hCG2042405 
LOC100290987          0.015   PREDICTED: hypothetical protein XP_002347812 
LOC100288061          0.015   PREDICTED: hypothetical protein XP_002343602 
ZSWIM2                0.010   zinc finger, SWIM domain containing 2 
B4GALT4               0.010   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4...
B4GALT4               0.010   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4 ...
JAG2                  0.007   jagged 2 isoform b precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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