Guide to the Human Genome
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Name: PPP4R4 Sequence: fasta or formatted (873aa) NCBI GI: 17402886
Description:

HEAT-like repeat-containing protein isoform 1

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [120aa] HEAT-like repeat-containing protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         42           3
 C cysteine            2.2         19           1
 D aspartate           4.6         40           2
 E glutamate           7.7         67           2
 F phenylalanine       4.2         37           2
 G glycine             3.2         28           2
 H histidine           2.5         22           1
 I isoleucine          5.5         48           2
 K lysine              7.4         65           2
 L leucine            13.2        115           4
 M methionine          2.4         21           2
 N asparagine          3.4         30           2
 P proline             5.0         44           4
 Q glutamine           5.2         45           2
 R arginine            5.2         45           2
 S serine              8.9         78           2
 T threonine           5.8         51           2
 V valine              5.8         51           2
 W tryptophan          0.3          3           1
 Y tyrosine            2.5         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HEAT-like repeat-containing protein isoform 1 
PPP4R4                0.100   HEAT-like repeat-containing protein isoform 2 
PPP2R1A               0.027   alpha isoform of regulatory subunit A, protein phosp...
PPP2R1B               0.024   beta isoform of regulatory subunit A, protein phosph...
PPP2R1B               0.024   beta isoform of regulatory subunit A, protein phosph...
PPP4R1                0.013   protein phosphatase 4, regulatory subunit 1 isoform b...
PPP4R1                0.013   protein phosphatase 4, regulatory subunit 1 isoform...
TMEM131               0.011   RW1 protein 
MUC19                 0.009   PREDICTED: mucin 19, oligomeric 
MUC19                 0.009   PREDICTED: mucin 19, oligomeric 
MUC19                 0.009   PREDICTED: mucin 19 
SR140                 0.009   U2-associated SR140 protein 
TTC14                 0.008   tetratricopeptide repeat domain 14 isoform a 
PPP1R12A              0.008   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.008   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.008   protein phosphatase 1, regulatory (inhibitor) subunit...
FAM126B               0.008   hypothetical protein LOC285172 
TOPORS                0.007   topoisomerase I binding, arginine/serine-rich 
ANK3                  0.007   ankyrin 3 isoform 1 
APC                   0.007   adenomatous polyposis coli 
APC                   0.007   adenomatous polyposis coli 
APC                   0.007   adenomatous polyposis coli 
MAP1A                 0.006   microtubule-associated protein 1A 
NIPBL                 0.006   delangin isoform B 
NIPBL                 0.006   delangin isoform A 
SCYL1                 0.006   SCY1-like 1 isoform B 
SCYL1                 0.006   SCY1-like 1 isoform A 
BRD2                  0.006   bromodomain containing 2 
BRD2                  0.006   bromodomain containing 2 
BRD3                  0.006   bromodomain containing protein 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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