Guide to the Human Genome
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Name: FAM124B Sequence: fasta or formatted (455aa) NCBI GI: 170671718
Description:

hypothetical protein LOC79843 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {272aa} hypothetical protein LOC79843 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         18           1
 C cysteine            2.6         12           1
 D aspartate           3.7         17           1
 E glutamate           6.8         31           3
 F phenylalanine       4.4         20           2
 G glycine             6.6         30           2
 H histidine           2.6         12           2
 I isoleucine          2.9         13           2
 K lysine              4.2         19           1
 L leucine            12.7         58           2
 M methionine          2.0          9           1
 N asparagine          3.3         15           2
 P proline             6.8         31           2
 Q glutamine           7.0         32           1
 R arginine            6.2         28           1
 S serine             11.2         51           2
 T threonine           4.6         21           1
 V valine              5.3         24           1
 W tryptophan          0.9          4           1
 Y tyrosine            2.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC79843 isoform a 
FAM124B               0.533   hypothetical protein LOC79843 isoform b 
FAM124A               0.224   hypothetical protein LOC220108 
KDM3B                 0.008   jumonji domain containing 1B 
NEUROD2               0.008   neurogenic differentiation 2 
CRKRS                 0.008   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.008   Cdc2-related kinase, arginine/serine-rich isoform 1...
BRCA2                 0.007   breast cancer 2, early onset 
FLG                   0.007   filaggrin 
TNS1                  0.007   tensin 
LOC100292378          0.006   PREDICTED: hypothetical protein 
EYA1                  0.006   eyes absent 1 isoform b 
EYA1                  0.006   eyes absent 1 isoform b 
EYA1                  0.006   eyes absent 1 isoform a 
SPEN                  0.006   spen homolog, transcriptional regulator 
FAM179A               0.006   hypothetical protein LOC165186 
BZRAP1                0.006   peripheral benzodiazepine receptor-associated prote...
BZRAP1                0.006   peripheral benzodiazepine receptor-associated prote...
TNRC18                0.006   trinucleotide repeat containing 18 
MYOZ2                 0.006   myozenin 2 
LOC100130128          0.006   PREDICTED: hypothetical protein 
LOC100130128          0.006   PREDICTED: hypothetical protein 
LOC100130128          0.006   PREDICTED: hypothetical protein 
PHRF1                 0.006   PHD and ring finger domains 1 
PDZD4                 0.006   PDZ domain containing 4 
TEX2                  0.004   testis expressed sequence 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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