Guide to the Human Genome
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Name: TP63 Sequence: fasta or formatted (393aa) NCBI GI: 169234665
Description:

tumor protein p63 isoform 6

Referenced in:

p53 Pathway

Other entries for this name:
alt prot [555aa] tumor protein p63 isoform 2
alt prot [487aa] tumor protein p63 isoform 3
alt prot [586aa] tumor protein p63 isoform 4
alt prot [461aa] tumor protein p63 isoform 5
alt prot [680aa] tumor protein p63 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         18           1
 C cysteine            2.3          9           1
 D aspartate           3.8         15           2
 E glutamate           6.1         24           1
 F phenylalanine       3.1         12           2
 G glycine             4.3         17           2
 H histidine           3.1         12           1
 I isoleucine          4.6         18           2
 K lysine              4.8         19           2
 L leucine             7.1         28           2
 M methionine          2.3          9           1
 N asparagine          4.6         18           2
 P proline             8.4         33           3
 Q glutamine           8.4         33           6
 R arginine            6.6         26           2
 S serine              8.9         35           3
 T threonine           7.1         28           2
 V valine              5.6         22           2
 W tryptophan          0.3          1           1
 Y tyrosine            4.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor protein p63 isoform 6 
TP63                  0.965   tumor protein p63 isoform 3 
TP63                  0.898   tumor protein p63 isoform 5 
TP63                  0.898   tumor protein p63 isoform 4 
TP63                  0.863   tumor protein p63 isoform 2 
TP63                  0.863   tumor protein p63 isoform 1 
TP73                  0.585   tumor protein p73 isoform c 
TP73                  0.585   tumor protein p73 isoform b 
TP73                  0.585   tumor protein p73 isoform a 
TP73                  0.584   tumor protein p73 isoform d 
TP53                  0.318   tumor protein p53 isoform a 
TP53                  0.318   tumor protein p53 isoform a 
TP53                  0.292   tumor protein p53 isoform b 
TP53                  0.292   tumor protein p53 isoform c 
TP53                  0.270   tumor protein p53 isoform d 
TP53                  0.245   tumor protein p53 isoform f 
TP53                  0.245   tumor protein p53 isoform e 
SAMD4A                0.013   sterile alpha motif domain containing 4 isoform 2 [...
SAMD4A                0.013   sterile alpha motif domain containing 4 isoform 1 [...
ABI3                  0.012   NESH protein isoform 2 
ABI3                  0.012   NESH protein isoform 1 
BMP2K                 0.012   BMP-2 inducible kinase isoform a 
BMP2K                 0.012   BMP-2 inducible kinase isoform b 
CREBBP                0.010   CREB binding protein isoform b 
CREBBP                0.010   CREB binding protein isoform a 
LOC284297             0.010   hypothetical protein LOC284297 
TCHH                  0.010   trichohyalin 
DSP                   0.009   desmoplakin isoform I 
GIGYF2                0.009   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.009   GRB10 interacting GYF protein 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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