| Name: LOC100134216 | Sequence: fasta or formatted (245aa) | NCBI GI: 169217681 | |
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Description: PREDICTED: similar to hCG1747328, partial
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.1 15 2 C cysteine 4.1 10 1 D aspartate 6.1 15 2 E glutamate 6.9 17 2 F phenylalanine 3.7 9 1 G glycine 7.3 18 2 H histidine 2.0 5 1 I isoleucine 2.0 5 1 K lysine 4.1 10 1 L leucine 8.6 21 4 M methionine 1.2 3 1 N asparagine 4.1 10 3 P proline 3.7 9 1 Q glutamine 4.1 10 1 R arginine 5.7 14 2 S serine 7.3 18 3 T threonine 8.6 21 2 V valine 9.0 22 2 W tryptophan 3.3 8 2 Y tyrosine 2.0 5 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1747328, partial MUC3B 0.990 PREDICTED: mucin 3B, cell surface associated, parti... MUC3A 0.990 PREDICTED: mucin 3A, intestinal LOC100134674 0.990 PREDICTED: similar to intestinal mucin MUC12 0.198 PREDICTED: mucin 12 MUC12 0.198 PREDICTED: mucin 12 MUC17 0.184 mucin 17 MUC12 0.165 PREDICTED: mucin 12 MUC12 0.157 PREDICTED: mucin 12, cell surface associated CSPG5 0.031 chondroitin sulfate proteoglycan 5 (neuroglycan C) ... MUC4 0.029 mucin 4 isoform a MUC4 0.029 mucin 4 isoform e MUC4 0.029 mucin 4 isoform d LRP2 0.020 low density lipoprotein-related protein 2 MEP1A 0.016 meprin A alpha PRDM2 0.016 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.016 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.016 retinoblastoma protein-binding zinc finger protein i... MEP1B 0.016 meprin A beta SLIT3 0.014 slit homolog 3 DNER 0.014 delta-notch-like EGF repeat-containing transmembran... IMPG2 0.014 interphotoreceptor matrix proteoglycan 2 SCN1A 0.012 sodium channel, voltage-gated, type I, alpha FBN2 0.010 fibrillin 2 precursor LRP1 0.010 low density lipoprotein-related protein 1 LOC100292323 0.010 PREDICTED: hypothetical protein isoform 1 LOC100292323 0.010 PREDICTED: hypothetical protein isoform 2 LOC100289911 0.010 PREDICTED: hypothetical protein XP_002347477 isofor... LOC100289911 0.010 PREDICTED: hypothetical protein XP_002347478 isofor... LOC100287557 0.010 PREDICTED: hypothetical protein XP_002343293 isofor...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
