| Name: LOC643802 | Sequence: fasta or formatted (213aa) | NCBI GI: 169210281 | |
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Description: PREDICTED: similar to M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
| Not currently referenced in the text | ||
Other entries for this name:
alt mRNA {213aa} PREDICTED: similar to M-phase phosphoprotein 10 (U3 small nucleol... alt prot {213aa} PREDICTED: similar to M-phase phosphoprotein 10 (U3 small nucleol... | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 2.8 6 1 C cysteine 1.4 3 1 D aspartate 11.3 24 2 E glutamate 16.9 36 4 F phenylalanine 4.7 10 2 G glycine 5.6 12 2 H histidine 0.9 2 1 I isoleucine 2.3 5 2 K lysine 9.9 21 3 L leucine 6.6 14 2 M methionine 2.3 5 2 N asparagine 4.2 9 2 P proline 2.8 6 1 Q glutamine 4.2 9 2 R arginine 4.7 10 1 S serine 8.9 19 2 T threonine 3.3 7 1 V valine 3.8 8 1 W tryptophan 1.9 4 1 Y tyrosine 1.4 3 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to M-phase phosphoprotein 10 (U3... LOC643802 1.000 PREDICTED: similar to M-phase phosphoprotein 10 (U3... LOC643802 0.990 PREDICTED: similar to M-phase phosphoprotein 10 (U3... MPHOSPH10 0.522 M-phase phosphoprotein 10 LOC400352 0.278 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.278 PREDICTED: similar to Putative golgin subfamily A m... SUPT6H 0.068 suppressor of Ty 6 homolog CHD5 0.060 chromodomain helicase DNA binding protein 5 CCAR1 0.053 cell-cycle and apoptosis regulatory protein 1 HTATSF1 0.048 HIV-1 Tat specific factor 1 HTATSF1 0.048 HIV-1 Tat specific factor 1 NSBP1 0.048 nucleosomal binding protein 1 CENPB 0.048 centromere protein B CHD1 0.046 chromodomain helicase DNA binding protein 1 DAXX 0.046 death-domain associated protein isoform a DAXX 0.046 death-domain associated protein isoform a DAXX 0.046 death-domain associated protein isoform b HRC 0.043 histidine rich calcium binding protein precursor [Hom... GTF2F1 0.043 general transcription factor IIF, polypeptide 1, 74... EIF5B 0.043 eukaryotic translation initiation factor 5B LEO1 0.043 Leo1, Paf1/RNA polymerase II complex component, homo... TCEAL5 0.043 transcription elongation factor A (SII)-like 5 [Homo... RPGR 0.041 retinitis pigmentosa GTPase regulator isoform C [Hom... BOD1L 0.041 biorientation of chromosomes in cell division 1-like... MYT1L 0.041 myelin transcription factor 1-like RBM25 0.041 RNA binding motif protein 25 CDC2L2 0.041 cell division cycle 2-like 2 isoform 4 CDC2L2 0.041 cell division cycle 2-like 2 isoform 1 CDC2L1 0.041 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.041 cell division cycle 2-like 1 (PITSLRE proteins) isof...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
