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Search of human proteins with 169210188
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169210188 PREDICTED: similar to hCG2042391 [Homo sapiens]
(129 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169209673 PREDICTED: similar to hCG2042391 [Homo sapiens] 270 2e-73
gi|169210658 PREDICTED: similar to hCG2042391 [Homo sapiens] 270 2e-73
gi|169210188 PREDICTED: similar to hCG2042391 [Homo sapiens] 270 2e-73
gi|239750115 PREDICTED: similar to hCG2042391 [Homo sapiens] 244 1e-65
gi|239755573 PREDICTED: similar to ectonucleotide pyrophosphatas... 216 3e-57
gi|239743493 PREDICTED: hypothetical protein XP_002342862 [Homo ... 213 3e-56
gi|239743501 PREDICTED: similar to hCG2042391 [Homo sapiens] 211 1e-55
gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas... 154 2e-38
gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatas... 154 2e-38
gi|45545421 ectonucleotide pyrophosphatase/phosphodiesterase 7 [... 115 1e-26
gi|11034849 ectonucleotide pyrophosphatase/phosphodiesterase 5 (... 52 1e-07
gi|7662358 ectonucleotide pyrophosphatase/phosphodiesterase 4 (p... 44 4e-05
gi|111160296 ectonucleotide pyrophosphatase/phosphodiesterase 3 ... 38 0.002
gi|170650661 ectonucleotide pyrophosphatase/phosphodiesterase 1 ... 36 0.010
gi|195947389 autotaxin isoform 3 preproprotein [Homo sapiens] 32 0.11
gi|91823602 autotaxin isoform 2 preproprotein [Homo sapiens] 32 0.11
gi|23503267 ectonucleotide pyrophosphatase/phosphodiesterase 6 [... 30 0.53
gi|108773804 Fraser syndrome 1 [Homo sapiens] 29 0.90
gi|21361120 calponin 1, basic, smooth muscle [Homo sapiens] 28 2.0
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 28 2.0
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 28 2.0
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 28 2.0
gi|187608446 phosphatidylinositol glycan anchor biosynthesis, cl... 28 2.0
gi|187608438 phosphatidylinositol glycan anchor biosynthesis, cl... 28 2.0
gi|166295196 checkpoint kinase 1 [Homo sapiens] 27 5.8
gi|166295194 checkpoint kinase 1 [Homo sapiens] 27 5.8
gi|166295192 checkpoint kinase 1 [Homo sapiens] 27 5.8
gi|18641360 collectin sub-family member 12 [Homo sapiens] 26 7.6
gi|189409125 transcription factor Dp family, member 3 [Homo sapi... 26 9.9
>gi|169209673 PREDICTED: similar to hCG2042391 [Homo sapiens]
Length = 129
Score = 270 bits (690), Expect = 2e-73
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV
Sbjct: 1 MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
Query: 61 MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS
Sbjct: 61 MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
Query: 121 VSSSHEAMG 129
VSSSHEAMG
Sbjct: 121 VSSSHEAMG 129
>gi|169210658 PREDICTED: similar to hCG2042391 [Homo sapiens]
Length = 129
Score = 270 bits (690), Expect = 2e-73
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV
Sbjct: 1 MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
Query: 61 MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS
Sbjct: 61 MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
Query: 121 VSSSHEAMG 129
VSSSHEAMG
Sbjct: 121 VSSSHEAMG 129
>gi|169210188 PREDICTED: similar to hCG2042391 [Homo sapiens]
Length = 129
Score = 270 bits (690), Expect = 2e-73
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV
Sbjct: 1 MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
Query: 61 MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS
Sbjct: 61 MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
Query: 121 VSSSHEAMG 129
VSSSHEAMG
Sbjct: 121 VSSSHEAMG 129
>gi|239750115 PREDICTED: similar to hCG2042391 [Homo sapiens]
Length = 149
Score = 244 bits (623), Expect = 1e-65
Identities = 118/129 (91%), Positives = 121/129 (93%)
Query: 1 MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
MRNGP+GIFFLYLQ NKAASSHYSRGGAKY+GEAVKR LVESYTHPNSNETE RENIDTV
Sbjct: 21 MRNGPEGIFFLYLQWNKAASSHYSRGGAKYEGEAVKRCLVESYTHPNSNETERRENIDTV 80
Query: 61 MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
MNWFTKEDFD VTLCYREPDNV HRF PEAENRKLMIQQ+DRTIGYLVGATEKHSLQSTS
Sbjct: 81 MNWFTKEDFDIVTLCYREPDNVRHRFRPEAENRKLMIQQLDRTIGYLVGATEKHSLQSTS 140
Query: 121 VSSSHEAMG 129
SSSHE MG
Sbjct: 141 ASSSHETMG 149
>gi|239755573 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 (putative function)
[Homo sapiens]
Length = 661
Score = 216 bits (551), Expect = 3e-57
Identities = 106/121 (87%), Positives = 111/121 (91%)
Query: 1 MRNGPDGIFFLYLQGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTV 60
MRNGPDGIF LY++G KAASSHYSRGGAKY+GEAVKRSLVESYTH NSNETE RENIDTV
Sbjct: 211 MRNGPDGIFLLYVKGKKAASSHYSRGGAKYEGEAVKRSLVESYTHQNSNETEQRENIDTV 270
Query: 61 MNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTS 120
MN FTKEDFDFVTL YR+PDNVGHRF PEAENRKLMIQQ+DRTI YLVGATEKHSLQS
Sbjct: 271 MNCFTKEDFDFVTLYYRQPDNVGHRFKPEAENRKLMIQQLDRTIWYLVGATEKHSLQSPQ 330
Query: 121 V 121
V
Sbjct: 331 V 331
>gi|239743493 PREDICTED: hypothetical protein XP_002342862 [Homo
sapiens]
Length = 169
Score = 213 bits (543), Expect = 3e-56
Identities = 102/115 (88%), Positives = 108/115 (93%)
Query: 15 GNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVTL 74
GN+AAS HYSRGGAKY+GEAVK SLV+SYTHP+SNETE +ENIDTVMNWFTKEDFDFVTL
Sbjct: 55 GNRAASFHYSRGGAKYEGEAVKWSLVDSYTHPSSNETERKENIDTVMNWFTKEDFDFVTL 114
Query: 75 CYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTSVSSSHEAMG 129
CYREPDNVGHRFGPEAE RKLMIQQIDRTIGYLVGATEKHSLQSTS SS HE +G
Sbjct: 115 CYREPDNVGHRFGPEAEKRKLMIQQIDRTIGYLVGATEKHSLQSTSASSLHETVG 169
>gi|239743501 PREDICTED: similar to hCG2042391 [Homo sapiens]
Length = 169
Score = 211 bits (537), Expect = 1e-55
Identities = 101/115 (87%), Positives = 107/115 (93%)
Query: 15 GNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVTL 74
GN+AAS HYSRGGAKY+GEAVK SLV+SYTHP+SNETE +ENID VMNWFTKEDFDFVTL
Sbjct: 55 GNRAASFHYSRGGAKYEGEAVKWSLVDSYTHPSSNETERKENIDIVMNWFTKEDFDFVTL 114
Query: 75 CYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQSTSVSSSHEAMG 129
CYREPDNVGHRFGPEAE RKLMIQQIDRTIGYLVGATEKHSLQSTS SS HE +G
Sbjct: 115 CYREPDNVGHRFGPEAEKRKLMIQQIDRTIGYLVGATEKHSLQSTSASSLHETVG 169
>gi|169217659 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 154 bits (388), Expect = 2e-38
Identities = 71/78 (91%), Positives = 75/78 (96%)
Query: 31 DGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVTLCYREPDNVGHRFGPEA 90
+GEAVKRSLVESYTHPNSNETE RENIDT+MNWFTKEDFDFVTLCYREPDNVGHRFGPEA
Sbjct: 20 EGEAVKRSLVESYTHPNSNETERRENIDTIMNWFTKEDFDFVTLCYREPDNVGHRFGPEA 79
Query: 91 ENRKLMIQQIDRTIGYLV 108
ENRKLMIQQI RTIG ++
Sbjct: 80 ENRKLMIQQIGRTIGVII 97
>gi|169167316 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 154 bits (388), Expect = 2e-38
Identities = 71/78 (91%), Positives = 75/78 (96%)
Query: 31 DGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVTLCYREPDNVGHRFGPEA 90
+GEAVKRSLVESYTHPNSNETE RENIDT+MNWFTKEDFDFVTLCYREPDNVGHRFGPEA
Sbjct: 20 EGEAVKRSLVESYTHPNSNETERRENIDTIMNWFTKEDFDFVTLCYREPDNVGHRFGPEA 79
Query: 91 ENRKLMIQQIDRTIGYLV 108
ENRKLMIQQI RTIG ++
Sbjct: 80 ENRKLMIQQIGRTIGVII 97
>gi|45545421 ectonucleotide pyrophosphatase/phosphodiesterase 7
[Homo sapiens]
Length = 458
Score = 115 bits (287), Expect = 1e-26
Identities = 53/94 (56%), Positives = 64/94 (68%)
Query: 14 QGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVT 73
QG +A S Y G Y G AV RS E H NETEWR NIDTVM WFT+ED D VT
Sbjct: 133 QGLRAGSFFYPGGNVTYQGVAVTRSRKEGIAHNYKNETEWRANIDTVMAWFTEEDLDLVT 192
Query: 74 LCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYL 107
L + EPD+ GHR+GPE+ R+ M++Q+DRT+GYL
Sbjct: 193 LYFGEPDSTGHRYGPESPERREMVRQVDRTVGYL 226
>gi|11034849 ectonucleotide pyrophosphatase/phosphodiesterase 5
(putative function) [Homo sapiens]
Length = 477
Score = 52.0 bits (123), Expect = 1e-07
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 23 YSRGGAKYDGEAVK-RSLVESYTHPNSNETEWRENIDTVMNWFT-KEDFDFVTLCYREPD 80
++ G A + G VK ++ P + + + + ++ WFT KE + L + +PD
Sbjct: 132 HTSGAAMWPGTDVKIHKRFPTHYMPYNESVSFEDRVAKIIEWFTSKEPINLGLLYWEDPD 191
Query: 81 NVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQST 119
++GH GP++ +I ID+ +GYL+ +K L +T
Sbjct: 192 DMGHHLGPDSPLMGPVISDIDKKLGYLIQMLKKAKLWNT 230
>gi|7662358 ectonucleotide pyrophosphatase/phosphodiesterase 4
(putative function) [Homo sapiens]
Length = 453
Score = 43.9 bits (102), Expect = 4e-05
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 40 VESYTHPNSNETEWRENIDTVMNWFTKED--FDFVTLCYREPDNVGHRFGPE-AENRKLM 96
+ SY ++ + E ++ + W + F TL + EPD GH++GPE EN +
Sbjct: 147 ISSYFMNYNSSVSFEERLNNITMWLNNSNPPVTFATLYWEEPDASGHKYGPEDKENMSRV 206
Query: 97 IQQIDRTIGYLV 108
+++ID IG LV
Sbjct: 207 LKKIDDLIGDLV 218
>gi|111160296 ectonucleotide pyrophosphatase/phosphodiesterase 3
[Homo sapiens]
Length = 875
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 9/108 (8%)
Query: 14 QGNKAASSHYSRGGAKYDGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFD--- 70
QG KAA+ + +G S P + + E I T++ W +
Sbjct: 262 QGLKAATYFWPGSEVAINGS------FPSIYMPYNGSVPFEERISTLLKWLDLPKAERPR 315
Query: 71 FVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSLQS 118
F T+ + EPD+ GH GP + +Q +D G L+ ++ +L +
Sbjct: 316 FYTMYFEEPDSSGHAGGPVSARVIKALQVVDHAFGMLMEGLKQRNLHN 363
>gi|170650661 ectonucleotide pyrophosphatase/phosphodiesterase 1
[Homo sapiens]
Length = 925
Score = 35.8 bits (81), Expect = 0.010
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 53 WRENIDTVMNWFT---KEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVG 109
+ E I V+ W E F TL EPD+ GH +GP + +Q++D +G L+
Sbjct: 346 FEERILAVLQWLQLPKDERPHFYTLYLEEPDSSGHSYGPVSSEVIKALQRVDGMVGMLMD 405
Query: 110 ATEKHSL 116
++ +L
Sbjct: 406 GLKELNL 412
>gi|195947389 autotaxin isoform 3 preproprotein [Homo sapiens]
Length = 888
Score = 32.3 bits (72), Expect = 0.11
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 59 TVMNWFTKEDFD--FVTLCYRE-PDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHS 115
T++ W T D + V Y E PD GH++GP +++ID+ +G L+ ++
Sbjct: 288 TILQWLTLPDHERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKIVGQLMDGLKQLK 347
Query: 116 L 116
L
Sbjct: 348 L 348
>gi|91823602 autotaxin isoform 2 preproprotein [Homo sapiens]
Length = 863
Score = 32.3 bits (72), Expect = 0.11
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 59 TVMNWFTKEDFD--FVTLCYRE-PDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHS 115
T++ W T D + V Y E PD GH++GP +++ID+ +G L+ ++
Sbjct: 288 TILQWLTLPDHERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKIVGQLMDGLKQLK 347
Query: 116 L 116
L
Sbjct: 348 L 348
>gi|23503267 ectonucleotide pyrophosphatase/phosphodiesterase 6
[Homo sapiens]
Length = 440
Score = 30.0 bits (66), Expect = 0.53
Identities = 13/61 (21%), Positives = 27/61 (44%)
Query: 57 IDTVMNWFTKEDFDFVTLCYREPDNVGHRFGPEAENRKLMIQQIDRTIGYLVGATEKHSL 116
+ ++ F D + + D GH +GP + RK ++ +D + Y+ ++ L
Sbjct: 170 VSDALDSFKSGRADLAAIYHERIDVEGHHYGPASPQRKDALKAVDTVLKYMTKWIQERGL 229
Query: 117 Q 117
Q
Sbjct: 230 Q 230
>gi|108773804 Fraser syndrome 1 [Homo sapiens]
Length = 4011
Score = 29.3 bits (64), Expect = 0.90
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 45 HPNSNETEWRENIDTVMNWFTKEDFDFVTLCYREPDNVGH 84
HPN E R++ + + +FT+ED + + YR P H
Sbjct: 1509 HPNQGIIEHRDHPHSPIRYFTQEDINQGKVMYRPPPAAPH 1548
>gi|21361120 calponin 1, basic, smooth muscle [Homo sapiens]
Length = 297
Score = 28.1 bits (61), Expect = 2.0
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 19 ASSHYSRGGAKYDGEAVKRSLVESYTHPNSNE-TEWRENI 57
+S+H++RG A VK L + Y H E EW E +
Sbjct: 2 SSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGV 41
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 28.1 bits (61), Expect = 2.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 5 PDGIFFLYLQGNKAASSHYSRGGAKYDGEAVK 36
PDG+ LQ N +++ HYS A GE K
Sbjct: 1305 PDGVLLQVLQANLSSAGHYSCIAANAVGEKTK 1336
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 28.1 bits (61), Expect = 2.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 5 PDGIFFLYLQGNKAASSHYSRGGAKYDGEAVK 36
PDG+ LQ N +++ HYS A GE K
Sbjct: 2496 PDGVLLQVLQANLSSAGHYSCIAANAVGEKTK 2527
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 28.1 bits (61), Expect = 2.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 5 PDGIFFLYLQGNKAASSHYSRGGAKYDGEAVK 36
PDG+ LQ N +++ HYS A GE K
Sbjct: 1214 PDGVLLQVLQANLSSAGHYSCIAANAVGEKTK 1245
>gi|187608446 phosphatidylinositol glycan anchor biosynthesis, class
G isoform 1 [Homo sapiens]
Length = 983
Score = 28.1 bits (61), Expect = 2.0
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 29 KYDGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVTLCYREPDNVGHRFGP 88
+YDG V YT ++N T ++D V+ + D+D + L Y D++GH GP
Sbjct: 176 EYDGTT--SFFVSDYTEVDNNVTR---HLDKVLK---RGDWDILILHYLGLDHIGHISGP 227
Query: 89 EA 90
+
Sbjct: 228 NS 229
>gi|187608438 phosphatidylinositol glycan anchor biosynthesis, class
G isoform 2 [Homo sapiens]
Length = 975
Score = 28.1 bits (61), Expect = 2.0
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 29 KYDGEAVKRSLVESYTHPNSNETEWRENIDTVMNWFTKEDFDFVTLCYREPDNVGHRFGP 88
+YDG V YT ++N T ++D V+ + D+D + L Y D++GH GP
Sbjct: 176 EYDGTT--SFFVSDYTEVDNNVTR---HLDKVLK---RGDWDILILHYLGLDHIGHISGP 227
Query: 89 EA 90
+
Sbjct: 228 NS 229
>gi|166295196 checkpoint kinase 1 [Homo sapiens]
Length = 476
Score = 26.6 bits (57), Expect = 5.8
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 46 PNSNETEWRENIDTVMNWFTKEDFDFVTLCYREP-DNVGHRFGPEAENRKLMIQQIDRTI 104
P S++ W+ + + +FTK D D C +E + +G+++ N ++ I DR
Sbjct: 363 PGSSQNPWQRLVKRMTRFFTKLDADKSYQCLKETCEKLGYQWKKSCMN-QVTISTTDRRN 421
Query: 105 GYLV 108
L+
Sbjct: 422 NKLI 425
>gi|166295194 checkpoint kinase 1 [Homo sapiens]
Length = 476
Score = 26.6 bits (57), Expect = 5.8
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 46 PNSNETEWRENIDTVMNWFTKEDFDFVTLCYREP-DNVGHRFGPEAENRKLMIQQIDRTI 104
P S++ W+ + + +FTK D D C +E + +G+++ N ++ I DR
Sbjct: 363 PGSSQNPWQRLVKRMTRFFTKLDADKSYQCLKETCEKLGYQWKKSCMN-QVTISTTDRRN 421
Query: 105 GYLV 108
L+
Sbjct: 422 NKLI 425
>gi|166295192 checkpoint kinase 1 [Homo sapiens]
Length = 476
Score = 26.6 bits (57), Expect = 5.8
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 46 PNSNETEWRENIDTVMNWFTKEDFDFVTLCYREP-DNVGHRFGPEAENRKLMIQQIDRTI 104
P S++ W+ + + +FTK D D C +E + +G+++ N ++ I DR
Sbjct: 363 PGSSQNPWQRLVKRMTRFFTKLDADKSYQCLKETCEKLGYQWKKSCMN-QVTISTTDRRN 421
Query: 105 GYLV 108
L+
Sbjct: 422 NKLI 425
>gi|18641360 collectin sub-family member 12 [Homo sapiens]
Length = 742
Score = 26.2 bits (56), Expect = 7.6
Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 13/74 (17%)
Query: 20 SSHYSRGGAKYDGEAVKRSLVESYTH-----PNSNETEWRENIDTVMNWFTKEDFDFVTL 74
SSH + + + +K+ +V +H + E EW+ W D+
Sbjct: 639 SSHLVFINTREEQQWIKKQMVGRESHWIGLTDSERENEWK--------WLDGTSPDYKNW 690
Query: 75 CYREPDNVGHRFGP 88
+PDN GH GP
Sbjct: 691 KAGQPDNWGHGHGP 704
>gi|189409125 transcription factor Dp family, member 3 [Homo
sapiens]
Length = 405
Score = 25.8 bits (55), Expect = 9.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 24 SRGGAKYDGEAVKRSLVESYTHPNSNETEWREN 56
S GG++Y G V+ VE ++N+ + EN
Sbjct: 369 SSGGSQYSGSRVETPAVEEEEEEDNNDDDLSEN 401
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,951,960
Number of Sequences: 37866
Number of extensions: 187444
Number of successful extensions: 303
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 280
Number of HSP's gapped (non-prelim): 30
length of query: 129
length of database: 18,247,518
effective HSP length: 90
effective length of query: 39
effective length of database: 14,839,578
effective search space: 578743542
effective search space used: 578743542
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.