Guide to the Human Genome
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Name: LOC100131098 Sequence: fasta or formatted (257aa) NCBI GI: 169204510
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {257aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         27           2
 C cysteine            3.5          9           2
 D aspartate           1.2          3           1
 E glutamate           3.1          8           1
 F phenylalanine       1.6          4           1
 G glycine            12.8         33           2
 H histidine           0.4          1           1
 I isoleucine          1.9          5           1
 K lysine              5.4         14           2
 L leucine             9.3         24           2
 M methionine          0.4          1           1
 N asparagine          3.1          8           1
 P proline            13.2         34           4
 Q glutamine           4.7         12           1
 R arginine           12.5         32           2
 S serine              5.4         14           1
 T threonine           4.7         12           2
 V valine              4.3         11           1
 W tryptophan          0.8          2           1
 Y tyrosine            1.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100131098          0.994   PREDICTED: hypothetical protein 
SORCS2                0.047   VPS10 domain receptor protein SORCS 2 
KLF2                  0.037   Kruppel-like factor 
PPARGC1B              0.035   peroxisome proliferator-activated receptor gamma, co...
COL7A1                0.031   alpha 1 type VII collagen precursor 
SORCS3                0.029   VPS10 domain receptor protein SORCS 3 
COL9A3                0.029   alpha 3 type IX collagen 
LOC100129571          0.027   PREDICTED: similar to hCG1646049 
LOC100129571          0.027   PREDICTED: similar to hCG1646049 
LOC100129571          0.027   PREDICTED: similar to hCG1646049 
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
LOC645321             0.027   PREDICTED: hypothetical protein 
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
KRBA1                 0.027   KRAB A domain containing 1 
RANBP9                0.024   RAN binding protein 9 
LOC100292124          0.024   PREDICTED: hypothetical protein XP_002346387 
LOC390595             0.024   PREDICTED: similar to ubiquitin-associated protein ...
LOC390595             0.024   PREDICTED: similar to ubiquitin-associated protein ...
LOC728597             0.024   PREDICTED: doublecortin domain-containing protein E...
LOC390595             0.024   PREDICTED: hypothetical protein 
LOC728597             0.024   PREDICTED: doublecortin domain-containing protein E...
C1orf229              0.024   hypothetical protein LOC388759 
CELSR3                0.024   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
ARHGEF15              0.024   Rho guanine exchange factor 15 
GGN                   0.024   gametogenetin 
WEE1                  0.024   WEE1 tyrosine kinase isoform 1 
KAT2B                 0.024   K(lysine) acetyltransferase 2B 
DRD4                  0.024   dopamine receptor D4 
LOC100293644          0.024   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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