Name: DEFB118 | Sequence: fasta or formatted (123aa) | NCBI GI: 16905373 | |
Description: beta-defensin 118
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Referenced in: Additional Host Defense Functions
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.9 6 1 C cysteine 4.9 6 2 D aspartate 6.5 8 2 E glutamate 6.5 8 2 F phenylalanine 1.6 2 1 G glycine 4.9 6 1 H histidine 3.3 4 2 I isoleucine 4.1 5 2 K lysine 7.3 9 2 L leucine 9.8 12 4 M methionine 2.4 3 1 N asparagine 3.3 4 1 P proline 7.3 9 1 Q glutamine 1.6 2 1 R arginine 5.7 7 2 S serine 9.8 12 2 T threonine 7.3 9 2 V valine 6.5 8 1 W tryptophan 0.8 1 1 Y tyrosine 1.6 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 beta-defensin 118 DEFB117 0.147 PREDICTED: defensin, beta 117 DEFB117 0.147 PREDICTED: defensin, beta 117 DEFB117 0.147 PREDICTED: defensin, beta 117 DEFB121 0.125 defensin, beta 121 DEFB123 0.125 defensin, beta 123 precursor DEFB115 0.112 beta-defensin 115 DEFB132 0.103 beta-defensin 32 precursor DEFB128 0.103 beta-defensin 128 DEFB119 0.103 defensin, beta 119 isoform c precursor DEFB125 0.099 defensin, beta 125 preproprotein DEFB126 0.082 defensin, beta 126 preproprotein DEFB127 0.078 defensin, beta 127 preproprotein DEFB119 0.078 defensin, beta 119 isoform a precursor LOC100133128 0.065 PREDICTED: hypothetical protein DEFB135 0.060 beta-defensin 135 LOC100133128 0.060 PREDICTED: hypothetical protein LOC100133128 0.060 PREDICTED: hypothetical protein DEFB108B 0.060 beta-defensin 108B DEFB124 0.056 beta-defensin 124 DEFB104A 0.047 defensin, beta 104A precursor DEFB104B 0.047 defensin, beta 104B precursor DEFB129 0.039 beta defensin 129 precursor DEFB116 0.034 beta-defensin 116 DEFB134 0.026 beta-defensin 134 LOC100287066 0.026 PREDICTED: hypothetical protein XP_002342880 LOC100128174 0.022 PREDICTED: hypothetical protein LOC100133790 0.022 PREDICTED: intestinal mucin-like, partial LOC100128174 0.022 PREDICTED: similar to defensin, beta 131 CEP350 0.022 centrosome-associated protein 350Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.