Guide to the Human Genome
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Name: MGAT1 Sequence: fasta or formatted (445aa) NCBI GI: 167857784
Description:

mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase

Referenced in:

Protein Glycosylation

Other entries for this name:
alt mRNA [445aa] mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminylt...
alt mRNA [445aa] mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminylt...
alt mRNA [445aa] mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminylt...
alt mRNA [445aa] mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminylt...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         43           2
 C cysteine            1.1          5           1
 D aspartate           6.1         27           2
 E glutamate           4.9         22           2
 F phenylalanine       5.6         25           2
 G glycine             6.1         27           1
 H histidine           2.0          9           1
 I isoleucine          3.6         16           2
 K lysine              3.8         17           2
 L leucine            10.3         46           4
 M methionine          1.1          5           1
 N asparagine          1.3          6           1
 P proline             7.4         33           2
 Q glutamine           5.8         26           2
 R arginine            9.2         41           2
 S serine              4.9         22           2
 T threonine           3.6         16           1
 V valine              7.2         32           3
 W tryptophan          2.9         13           1
 Y tyrosine            3.1         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety... 
MGAT1                 1.000   mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety...
MGAT1                 1.000   mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety...
MGAT1                 1.000   mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety...
MGAT1                 1.000   mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acety...
POMGNT1               0.127   O-linked mannose beta1,2-N-acetylglucosaminyltransf...
MELK                  0.011   maternal embryonic leucine zipper kinase 
CD1D                  0.008   CD1D antigen precursor 
RAD52                 0.008   RAD52 homolog 
MNT                   0.008   MAX binding protein 
CMPK2                 0.007   UMP-CMP kinase 2 
C6orf132              0.006   PREDICTED: chromosome 6 open reading frame 132 [Hom...
LOC730254             0.006   PREDICTED: hypothetical protein 
C6orf132              0.006   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.006   PREDICTED: hypothetical protein LOC647024 
LOC730254             0.006   PREDICTED: hypothetical protein 
C19orf61              0.006   hypothetical protein LOC56006 
GLTSCR1               0.006   glioma tumor suppressor candidate region gene 1 [Ho...
PALM2-AKAP2           0.006   PALM2-AKAP2 protein isoform 2 
PALM2-AKAP2           0.006   PALM2-AKAP2 protein isoform 1 
AKAP2                 0.006   A kinase (PRKA) anchor protein 2 isoform 2 
AKAP2                 0.006   A kinase (PRKA) anchor protein 2 isoform 1 
LOC100131908          0.006   PREDICTED: similar to forkhead box O6 
FOXO6                 0.006   PREDICTED: forkhead box protein O6 
HEG1                  0.006   HEG homolog 1 
DMBT1                 0.006   deleted in malignant brain tumors 1 isoform c precu...
DMBT1                 0.006   deleted in malignant brain tumors 1 isoform b precu...
FYCO1                 0.006   FYVE and coiled-coil domain containing 1 
KIAA1522              0.006   hypothetical protein LOC57648 
LOC100292259          0.004   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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