Guide to the Human Genome
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Name: MFGE8 Sequence: fasta or formatted (387aa) NCBI GI: 167830475
Description:

milk fat globule-EGF factor 8 protein isoform a

Referenced in:

Protein Glycosylation
Mammary Tissues

Other entries for this name:
alt prot [335aa] milk fat globule-EGF factor 8 protein isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         31           2
 C cysteine            3.6         14           1
 D aspartate           3.4         13           2
 E glutamate           4.7         18           2
 F phenylalanine       3.6         14           1
 G glycine             7.2         28           2
 H histidine           3.4         13           1
 I isoleucine          3.6         14           2
 K lysine              4.7         18           2
 L leucine            10.6         41           2
 M methionine          0.8          3           1
 N asparagine          8.3         32           2
 P proline             4.7         18           1
 Q glutamine           3.4         13           1
 R arginine            4.7         18           2
 S serine              7.5         29           3
 T threonine           4.7         18           1
 V valine              7.0         27           2
 W tryptophan          3.1         12           1
 Y tyrosine            3.4         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   milk fat globule-EGF factor 8 protein isoform a [Ho... 
MFGE8                 0.839   milk fat globule-EGF factor 8 protein isoform b [Ho...
EDIL3                 0.470   EGF-like repeats and discoidin I-like domains-contai...
F5                    0.288   coagulation factor V precursor 
F8                    0.252   coagulation factor VIII isoform a precursor 
NRP2                  0.209   neuropilin 2 isoform 3 precursor 
NRP2                  0.209   neuropilin 2 isoform 5 precursor 
NRP2                  0.209   neuropilin 2 isoform 1 precursor 
NRP2                  0.209   neuropilin 2 isoform 4 precursor 
NRP2                  0.209   neuropilin 2 isoform 2 precursor 
NRP1                  0.182   neuropilin 1 isoform c 
NRP1                  0.182   neuropilin 1 isoform b 
NRP1                  0.182   neuropilin 1 isoform a 
F8                    0.180   coagulation factor VIII isoform b precursor 
NRP2                  0.174   neuropilin 2 isoform 6 precursor 
DCBLD2                0.138   discoidin, CUB and LCCL domain containing 2 
RS1                   0.115   X-linked juvenile retinoschisis protein precursor [H...
DCBLD1                0.113   discoidin, CUB and LCCL domain containing 1 
CNTNAP2               0.095   cell recognition molecule Caspr2 precursor 
CPXM1                 0.090   carboxypeptidase X, member 1 precursor 
LOC389722             0.082   PREDICTED: hypothetical protein LOC389722 isoform 2...
LOC389722             0.082   PREDICTED: hypothetical protein LOC389722 isoform 1...
LOC642406             0.081   PREDICTED: similar to contactin associated protein-...
CNTNAP3               0.081   cell recognition molecule CASPR3 
CPXM2                 0.080   carboxypeptidase X (M14 family), member 2 
AEBP1                 0.078   adipocyte enhancer binding protein 1 precursor [Homo...
CNTNAP4               0.071   cell recognition protein CASPR4 isoform 2 
CNTNAP4               0.071   cell recognition protein CASPR4 isoform 1 
DDR2                  0.070   discoidin domain receptor family, member 2 precursor...
DDR2                  0.070   discoidin domain receptor family, member 2 precursor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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