Guide to the Human Genome
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Name: KIFC1 Sequence: fasta or formatted (673aa) NCBI GI: 167555110
Description:

kinesin family member C1

Referenced in:

Kinesins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         47           2
 C cysteine            1.5         10           1
 D aspartate           2.8         19           1
 E glutamate           8.6         58           2
 F phenylalanine       1.9         13           1
 G glycine             8.5         57           2
 H histidine           1.5         10           1
 I isoleucine          2.2         15           1
 K lysine              4.9         33           2
 L leucine            12.2         82           3
 M methionine          1.5         10           1
 N asparagine          3.0         20           1
 P proline             6.7         45           3
 Q glutamine           7.7         52           3
 R arginine            8.3         56           3
 S serine              8.3         56           3
 T threonine           6.1         41           2
 V valine              5.8         39           1
 W tryptophan          0.3          2           1
 Y tyrosine            1.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin family member C1 
KIFC3                 0.185   kinesin family member C3 isoform 2 
KIFC3                 0.185   kinesin family member C3 isoform 3 
KIFC3                 0.185   kinesin family member C3 isoform 1 
KIFC2                 0.149   kinesin family member C2 
KIF3A                 0.132   kinesin family member 3A 
KIF3B                 0.129   kinesin family member 3B 
KIF13B                0.122   kinesin family member 13B 
KIF17                 0.120   kinesin family member 17 isoform b 
KIF17                 0.120   kinesin family member 17 isoform a 
KIF3C                 0.119   kinesin family member 3C 
KIF14                 0.116   kinesin family member 14 
KIF15                 0.116   kinesin family member 15 
KIF27                 0.112   kinesin family member 27 
KIF4A                 0.112   kinesin family member 4 
KIF4B                 0.112   kinesin family member 4B 
KIF5A                 0.112   kinesin family member 5A 
KIF13A                0.112   kinesin family member 13A isoform d 
KIF13A                0.112   kinesin family member 13A isoform c 
KIF13A                0.112   kinesin family member 13A isoform b 
KIF13A                0.112   kinesin family member 13A isoform a 
KIF16B                0.111   kinesin-like motor protein C20orf23 
KIF1C                 0.109   kinesin family member 1C 
KIF1A                 0.108   axonal transport of synaptic vesicles 
KIF6                  0.106   kinesin family member 6 
KIF11                 0.105   kinesin family member 11 
KIF1B                 0.105   kinesin family member 1B isoform alpha 
KIF1B                 0.105   kinesin family member 1B isoform b 
KIF5C                 0.104   kinesin family member 5C 
KIF5B                 0.103   kinesin family member 5B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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