Guide to the Human Genome
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Name: IDUA Sequence: fasta or formatted (653aa) NCBI GI: 110611239
Description:

alpha-L-iduronidase precursor

Referenced in:

Major Disease Loci
Protein Glycosylation
Lysosomes and Related Organelles

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         64           3
 C cysteine            0.9          6           1
 D aspartate           5.1         33           2
 E glutamate           3.5         23           2
 F phenylalanine       4.0         26           2
 G glycine             6.7         44           2
 H histidine           3.5         23           2
 I isoleucine          1.5         10           1
 K lysine              2.0         13           1
 L leucine            12.6         82           3
 M methionine          1.1          7           1
 N asparagine          3.1         20           2
 P proline             9.3         61           2
 Q glutamine           4.3         28           2
 R arginine            8.1         53           2
 S serine              6.4         42           2
 T threonine           5.1         33           2
 V valine              7.4         48           2
 W tryptophan          2.5         16           1
 Y tyrosine            3.2         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha-L-iduronidase precursor 
LOC645249             0.008   PREDICTED: hypothetical protein 
KIAA1305              0.006   hypothetical protein LOC57523 
LOC100131225          0.006   PREDICTED: hypothetical protein 
LOC100291550          0.006   PREDICTED: hypothetical protein XP_002346431 
LOC100131225          0.005   PREDICTED: hypothetical protein 
LOC100131225          0.005   PREDICTED: hypothetical protein 
LOC100131225          0.005   PREDICTED: hypothetical protein 
ATF7IP                0.005   activating transcription factor 7 interacting protei...
LOC100292184          0.005   PREDICTED: hypothetical protein 
CHD7                  0.005   chromodomain helicase DNA binding protein 7 
TNKS1BP1              0.004   tankyrase 1-binding protein 1 
IRF2BP1               0.004   interferon regulatory factor 2 binding protein 1 [Ho...
ZFYVE9                0.004   zinc finger, FYVE domain containing 9 isoform 1 [Hom...
ZFYVE9                0.004   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
DALRD3                0.004   DALR anticodon binding domain containing 3 isoform 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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