Guide to the Human Genome
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Name: MS4A10 Sequence: fasta or formatted (267aa) NCBI GI: 167466260
Description:

membrane-spanning 4-domains, subfamily A, member 10

Referenced in:

MS4 Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         21           2
 C cysteine            2.2          6           1
 D aspartate           2.6          7           2
 E glutamate           3.4          9           1
 F phenylalanine       4.1         11           1
 G glycine             4.1         11           2
 H histidine           3.4          9           1
 I isoleucine          5.2         14           1
 K lysine              6.0         16           2
 L leucine            13.9         37           2
 M methionine          1.9          5           1
 N asparagine          2.6          7           1
 P proline             7.9         21           3
 Q glutamine           5.6         15           1
 R arginine            2.6          7           1
 S serine              7.9         21           2
 T threonine           6.7         18           2
 V valine              7.1         19           2
 W tryptophan          3.0          8           1
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane-spanning 4-domains, subfamily A, member 10... 
MS4A8B                0.080   membrane-spanning 4-domains, subfamily A, member 8B ...
MS4A15                0.059   membrane-spanning 4-domains, subfamily A, member 15...
MS4A1                 0.054   membrane-spanning 4-domains, subfamily A, member 1 [...
MS4A1                 0.054   membrane-spanning 4-domains, subfamily A, member 1 [...
MS4A12                0.054   membrane-spanning 4-domains, subfamily A, member 12 [...
MS4A5                 0.042   membrane-spanning 4-domains, subfamily A, member 5 [...
MS4A2                 0.042   membrane-spanning 4-domains, subfamily A, member 2 ...
MS4A2                 0.042   membrane-spanning 4-domains, subfamily A, member 2 is...
MS4A15                0.033   membrane-spanning 4-domains, subfamily A, member 15 ...
MS4A14                0.029   membrane-spanning 4-domains, subfamily A, member 14...
LOC728588             0.027   PREDICTED: similar to membrane-spanning 4-domains, ...
LOC728588             0.027   PREDICTED: similar to membrane-spanning 4-domains, ...
LOC728588             0.027   PREDICTED: similar to membrane-spanning 4-domains, ...
MS4A6A                0.027   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A6A                0.027   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A7                 0.027   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A7                 0.027   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A3                 0.021   membrane-spanning 4-domains, subfamily A, member 3 i...
MS4A4A                0.021   membrane-spanning 4-domains, subfamily A, member 4 i...
MS4A6A                0.021   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A4A                0.021   membrane-spanning 4-domains, subfamily A, member 4 i...
MS4A14                0.015   membrane-spanning 4-domains, subfamily A, member 14...
NAV2                  0.011   neuron navigator 2 isoform 3 
NAV2                  0.011   neuron navigator 2 isoform 1 
NAV2                  0.011   neuron navigator 2 isoform 2 
MBTPS2                0.010   membrane-bound transcription factor peptidase, site 2...
MS4A4E                0.010   PREDICTED: membrane-spanning 4-domains, subfamily A...
MS4A4E                0.010   PREDICTED: membrane-spanning 4-domains, subfamily A...
MS4A4E                0.010   PREDICTED: membrane-spanning 4-domains, subfamily A...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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