Guide to the Human Genome
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Name: FRAT2 Sequence: fasta or formatted (233aa) NCBI GI: 16507243
Description:

GSK-3 binding protein FRAT2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            16.3         38           3
 C cysteine            2.1          5           1
 D aspartate           5.2         12           3
 E glutamate           7.3         17           5
 F phenylalanine       0.4          1           1
 G glycine            10.7         25           3
 H histidine           0.4          1           1
 I isoleucine          1.3          3           1
 K lysine              0.9          2           1
 L leucine            11.2         26           3
 M methionine          0.4          1           1
 N asparagine          0.4          1           1
 P proline            11.2         26           2
 Q glutamine           5.2         12           2
 R arginine           10.3         24           2
 S serine              6.4         15           2
 T threonine           2.6          6           1
 V valine              6.4         15           1
 W tryptophan          0.9          2           1
 Y tyrosine            0.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GSK-3 binding protein FRAT2 
FRAT1                 0.709   GSK-3 binding protein FRAT1 
MAPK7                 0.043   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.043   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.043   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.043   mitogen-activated protein kinase 7 isoform 2 
KNDC1                 0.041   kinase non-catalytic C-lobe domain (KIND) containin...
WASH1                 0.039   WAS protein family homolog 1 
LOC100287171          0.039   PREDICTED: hypothetical protein XP_002342940 isofor...
LOC100287171          0.039   PREDICTED: hypothetical protein XP_002342939 isofor...
TAF4                  0.034   TBP-associated factor 4 
KRTAP4-6              0.034   PREDICTED: keratin associated protein 4.6 
KRTAP4-9              0.032   PREDICTED: keratin associated protein 4-9 
MLL2                  0.032   myeloid/lymphoid or mixed-lineage leukemia 2 
VPS37D                0.032   vacuolar protein sorting 37D 
NCL                   0.032   nucleolin 
SAMD1                 0.032   sterile alpha motif domain containing 1 
DIAPH1                0.032   diaphanous 1 isoform 2 
DIAPH1                0.032   diaphanous 1 isoform 1 
ZFHX3                 0.032   AT-binding transcription factor 1 
MLL4                  0.032   myeloid/lymphoid or mixed-lineage leukemia 4 
TMEM108               0.032   transmembrane protein 108 
TMEM108               0.032   transmembrane protein 108 
EIF3F                 0.030   eukaryotic translation initiation factor 3, subunit 5...
CDKN1C                0.030   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.030   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.030   cyclin-dependent kinase inhibitor 1C isoform a 
RTN4                  0.030   reticulon 4 isoform B 
RTN4                  0.030   reticulon 4 isoform D 
RTN4                  0.030   reticulon 4 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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