Guide to the Human Genome
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Name: MMAB Sequence: fasta or formatted (250aa) NCBI GI: 16418349
Description:

cob(I)alamin adenosyltransferase precursor

Referenced in:

Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         22           2
 C cysteine            2.4          6           1
 D aspartate           4.4         11           2
 E glutamate           6.8         17           2
 F phenylalanine       4.8         12           1
 G glycine             9.2         23           2
 H histidine           1.2          3           1
 I isoleucine          3.6          9           1
 K lysine              6.0         15           1
 L leucine            10.4         26           2
 M methionine          1.6          4           1
 N asparagine          1.6          4           1
 P proline             5.6         14           2
 Q glutamine           4.4         11           1
 R arginine            7.2         18           2
 S serine              7.6         19           2
 T threonine           6.8         17           2
 V valine              4.4         11           2
 W tryptophan          0.4          1           1
 Y tyrosine            2.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cob(I)alamin adenosyltransferase precursor 
TRIM33                0.021   tripartite motif-containing 33 protein isoform beta ...
TRIM33                0.021   tripartite motif-containing 33 protein isoform alpha...
NFX1                  0.013   nuclear transcription factor, X-box binding 1 isofor...
NFX1                  0.013   nuclear transcription factor, X-box binding 1 isofor...
NFX1                  0.013   nuclear transcription factor, X-box binding 1 isofor...
LOC100292645          0.010   PREDICTED: hypothetical protein 
LOC100288957          0.010   PREDICTED: hypothetical protein 
LOC100288957          0.010   PREDICTED: hypothetical protein XP_002342132 
ATP13A2               0.008   ATPase type 13A2 isoform 3 
ATP13A2               0.008   ATPase type 13A2 isoform 2 
ATP13A2               0.008   ATPase type 13A2 isoform 1 
DMRT2                 0.006   doublesex and mab-3 related transcription factor 2 ...
NRBP1                 0.006   nuclear receptor binding protein 
COL4A5                0.006   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.006   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.006   type IV collagen alpha 5 isoform 3 precursor 
NSUN5                 0.006   NOL1/NOP2/Sun domain family, member 5 isoform 1 [Hom...
NSUN5                 0.006   NOL1/NOP2/Sun domain family, member 5 isoform 2 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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