Search of human proteins with 157779135

Search of human proteins with 157779135

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|157779135 succinate-CoA ligase, GDP-forming beta subunit
precursor [Homo sapiens]
         (432 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157779135 succinate-CoA ligase, GDP-forming beta subunit prec...   838   0.0  
gi|239755885 PREDICTED: similar to hCG1791842 [Homo sapiens]          774   0.0  
gi|239750402 PREDICTED: similar to hCG1791842 isoform 3 [Homo sa...   774   0.0  
gi|239744702 PREDICTED: similar to sucb isoform 1 [Homo sapiens]      774   0.0  
gi|11321583 succinate-CoA ligase, ADP-forming, beta subunit prec...   410   e-114
gi|38569423 ATP citrate lyase isoform 2 [Homo sapiens]                 54   4e-07
gi|38569421 ATP citrate lyase isoform 1 [Homo sapiens]                 54   4e-07
gi|4826671 cadherin 18, type 2 preproprotein [Homo sapiens]            30   4.3  
gi|38505215 zinc finger protein 614 [Homo sapiens]                     29   9.5  

>gi|157779135 succinate-CoA ligase, GDP-forming beta subunit
           precursor [Homo sapiens]
          Length = 432

 Score =  838 bits (2166), Expect = 0.0
 Identities = 432/432 (100%), Positives = 432/432 (100%)

Query: 1   MASPVAAQAGKLLRALALRPRFLAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFF 60
           MASPVAAQAGKLLRALALRPRFLAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFF
Sbjct: 1   MASPVAAQAGKLLRALALRPRFLAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFF 60

Query: 61  VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQM 120
           VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQM
Sbjct: 61  VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQM 120

Query: 121 IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEV 180
           IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEV
Sbjct: 121 IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEV 180

Query: 181 AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV 240
           AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV
Sbjct: 181 AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV 240

Query: 241 EVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLD 300
           EVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLD
Sbjct: 241 EVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLD 300

Query: 301 GNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILV 360
           GNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILV
Sbjct: 301 GNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILV 360

Query: 361 NIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 420
           NIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED
Sbjct: 361 NIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 420

Query: 421 AAKKAVASVAKK 432
           AAKKAVASVAKK
Sbjct: 421 AAKKAVASVAKK 432


>gi|239755885 PREDICTED: similar to hCG1791842 [Homo sapiens]
          Length = 536

 Score =  774 bits (1999), Expect = 0.0
 Identities = 404/432 (93%), Positives = 417/432 (96%), Gaps = 1/432 (0%)

Query: 1   MASPVAAQAGKLLRALALRPRFLAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFF 60
           +ASP+AAQA KLL+ALAL PRFL A S+AVQLTSRRWL+LQE QSKKLMSDN V VQRFF
Sbjct: 106 IASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFF 165

Query: 61  VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQM 120
           VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLK GVHLTKDPNVVGQLAKQM
Sbjct: 166 VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQM 225

Query: 121 IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEV 180
           IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD+SCNGP+LVGSPQ G+DIEEV
Sbjct: 226 IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEV 285

Query: 181 AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV 240
           AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV
Sbjct: 286 AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV 345

Query: 241 EVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLD 300
           EVNPFGETPEGQVVCFDAKINFDDNAEF+QKDIFAMDDKSENEPIENEAAKYDLKYIGLD
Sbjct: 346 EVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLD 405

Query: 301 GNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILV 360
           GNIACFVNGAGLAMATCDIIFLNG KPA+FLDLGGGVKEAQVYQAF L TADPKVEAILV
Sbjct: 406 GNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILV 465

Query: 361 NIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 420
           NIFGGIVNCAIIANGITKAC+ELELKVPLVV LEGTNVQEAQ+IL NS LPITSA+DLED
Sbjct: 466 NIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQEAQEIL-NSRLPITSAVDLED 524

Query: 421 AAKKAVASVAKK 432
           AAKKAVASVAKK
Sbjct: 525 AAKKAVASVAKK 536


>gi|239750402 PREDICTED: similar to hCG1791842 isoform 3 [Homo
           sapiens]
          Length = 543

 Score =  774 bits (1999), Expect = 0.0
 Identities = 404/432 (93%), Positives = 417/432 (96%), Gaps = 1/432 (0%)

Query: 1   MASPVAAQAGKLLRALALRPRFLAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFF 60
           +ASP+AAQA KLL+ALAL PRFL A S+AVQLTSRRWL+LQE QSKKLMSDN V VQRFF
Sbjct: 113 IASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFF 172

Query: 61  VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQM 120
           VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLK GVHLTKDPNVVGQLAKQM
Sbjct: 173 VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQM 232

Query: 121 IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEV 180
           IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD+SCNGP+LVGSPQ G+DIEEV
Sbjct: 233 IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEV 292

Query: 181 AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV 240
           AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV
Sbjct: 293 AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV 352

Query: 241 EVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLD 300
           EVNPFGETPEGQVVCFDAKINFDDNAEF+QKDIFAMDDKSENEPIENEAAKYDLKYIGLD
Sbjct: 353 EVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLD 412

Query: 301 GNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILV 360
           GNIACFVNGAGLAMATCDIIFLNG KPA+FLDLGGGVKEAQVYQAF L TADPKVEAILV
Sbjct: 413 GNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILV 472

Query: 361 NIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 420
           NIFGGIVNCAIIANGITKAC+ELELKVPLVV LEGTNVQEAQ+IL NS LPITSA+DLED
Sbjct: 473 NIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQEAQEIL-NSRLPITSAVDLED 531

Query: 421 AAKKAVASVAKK 432
           AAKKAVASVAKK
Sbjct: 532 AAKKAVASVAKK 543


>gi|239744702 PREDICTED: similar to sucb isoform 1 [Homo sapiens]
          Length = 543

 Score =  774 bits (1999), Expect = 0.0
 Identities = 404/432 (93%), Positives = 417/432 (96%), Gaps = 1/432 (0%)

Query: 1   MASPVAAQAGKLLRALALRPRFLAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFF 60
           +ASP+AAQA KLL+ALAL PRFL A S+AVQLTSRRWL+LQE QSKKLMSDN V VQRFF
Sbjct: 113 IASPMAAQAWKLLQALALLPRFLVARSRAVQLTSRRWLSLQECQSKKLMSDNRVTVQRFF 172

Query: 61  VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQM 120
           VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLK GVHLTKDPNVVGQLAKQM
Sbjct: 173 VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQM 232

Query: 121 IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEV 180
           IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMD+SCNGP+LVGSPQ G+DIEEV
Sbjct: 233 IGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEV 292

Query: 181 AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV 240
           AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV
Sbjct: 293 AASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQV 352

Query: 241 EVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLD 300
           EVNPFGETPEGQVVCFDAKINFDDNAEF+QKDIFAMDDKSENEPIENEAAKYDLKYIGLD
Sbjct: 353 EVNPFGETPEGQVVCFDAKINFDDNAEFQQKDIFAMDDKSENEPIENEAAKYDLKYIGLD 412

Query: 301 GNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILV 360
           GNIACFVNGAGLAMATCDIIFLNG KPA+FLDLGGGVKEAQVYQAF L TADPKVEAILV
Sbjct: 413 GNIACFVNGAGLAMATCDIIFLNGRKPASFLDLGGGVKEAQVYQAFTLPTADPKVEAILV 472

Query: 361 NIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 420
           NIFGGIVNCAIIANGITKAC+ELELKVPLVV LEGTNVQEAQ+IL NS LPITSA+DLED
Sbjct: 473 NIFGGIVNCAIIANGITKACQELELKVPLVVWLEGTNVQEAQEIL-NSRLPITSAVDLED 531

Query: 421 AAKKAVASVAKK 432
           AAKKAVASVAKK
Sbjct: 532 AAKKAVASVAKK 543


>gi|11321583 succinate-CoA ligase, ADP-forming, beta subunit
           precursor [Homo sapiens]
          Length = 463

 Score =  410 bits (1054), Expect = e-114
 Identities = 212/397 (53%), Positives = 282/397 (71%)

Query: 30  VQLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAG 89
           VQ   +R L+L EY S +L+ + GV V + +VA + +EA   AK+L +K++V+KAQ+LAG
Sbjct: 45  VQQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAG 104

Query: 90  GRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDIS 149
           GRGKG F SGLKGGV +   P     ++ QMIG  L TKQT ++G   N+V+V E     
Sbjct: 105 GRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPR 164

Query: 150 RETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAE 209
           RE Y AI M+RS  GPVL+GS  GGV+IE+VAA +PE I KE IDI EGIK  QA ++A+
Sbjct: 165 REYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQ 224

Query: 210 NLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 269
            +GF   +   AA+ + KLY+LFLK DAT +E+NP  E  +G V+C DAKINFD N+ +R
Sbjct: 225 KMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYR 284

Query: 270 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPAN 329
           QK IF + D ++ +  + +AAK +L YIGLDGNI C VNGAGLAMAT DII L+GG PAN
Sbjct: 285 QKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPAN 344

Query: 330 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPL 389
           FLD+GGG    QV +AFKL+T+D KV AILVNIFGGI+ C +IA GI  A ++LE+K+P+
Sbjct: 345 FLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPV 404

Query: 390 VVRLEGTNVQEAQKILNNSGLPITSAIDLEDAAKKAV 426
           VVRL+GT V +A+ ++ +SGL I +  DL++AA+  V
Sbjct: 405 VVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441


>gi|38569423 ATP citrate lyase isoform 2 [Homo sapiens]
          Length = 1091

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 80/297 (26%), Positives = 123/297 (41%), Gaps = 43/297 (14%)

Query: 149 SRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIF--KEQIDIFEGIKDSQAQR 206
           + E Y+ I   R   G  ++   +GGVD+ +V A   +L+    E+++  E IK      
Sbjct: 116 AEEFYVCIYATRE--GDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNP-EDIKKHLLVH 172

Query: 207 MAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNA 266
             E+       K   A  I+ L+N +  +  T +E+NP   T +G V   D     D  A
Sbjct: 173 APEDK------KEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATA 225

Query: 267 EFRQK----DI-FAMDDKSENEPIENEAAKYDLK--------YIGLDGNIACFVNGAGLA 313
           ++  K    DI F      E  P E   A  D K         +   G I   V G G +
Sbjct: 226 DYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGAS 285

Query: 314 MATCDIIFLNGG--KPANFLDLGGGVKEAQVYQAFK----LLTADPKVEAILVNIFGGIV 367
           +   D I   GG  + AN+ +  G   E Q Y   K    L+T +   +  ++ I G I 
Sbjct: 286 VVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIA 345

Query: 368 NCAIIA---NGITKACREL-----ELKVPLVVRLEGTNVQEAQKIL----NNSGLPI 412
           N   +A    GI +A R+      E +V + VR  G N QE  +++      +G+PI
Sbjct: 346 NFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPI 402


>gi|38569421 ATP citrate lyase isoform 1 [Homo sapiens]
          Length = 1101

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 80/297 (26%), Positives = 123/297 (41%), Gaps = 43/297 (14%)

Query: 149 SRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIF--KEQIDIFEGIKDSQAQR 206
           + E Y+ I   R   G  ++   +GGVD+ +V A   +L+    E+++  E IK      
Sbjct: 116 AEEFYVCIYATRE--GDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNP-EDIKKHLLVH 172

Query: 207 MAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNA 266
             E+       K   A  I+ L+N +  +  T +E+NP   T +G V   D     D  A
Sbjct: 173 APEDK------KEILASFISGLFNFYEDLYFTYLEINPLVVTKDG-VYVLDLAAKVDATA 225

Query: 267 EFRQK----DI-FAMDDKSENEPIENEAAKYDLK--------YIGLDGNIACFVNGAGLA 313
           ++  K    DI F      E  P E   A  D K         +   G I   V G G +
Sbjct: 226 DYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGAS 285

Query: 314 MATCDIIFLNGG--KPANFLDLGGGVKEAQVYQAFK----LLTADPKVEAILVNIFGGIV 367
           +   D I   GG  + AN+ +  G   E Q Y   K    L+T +   +  ++ I G I 
Sbjct: 286 VVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIA 345

Query: 368 NCAIIA---NGITKACREL-----ELKVPLVVRLEGTNVQEAQKIL----NNSGLPI 412
           N   +A    GI +A R+      E +V + VR  G N QE  +++      +G+PI
Sbjct: 346 NFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPI 402


>gi|4826671 cadherin 18, type 2 preproprotein [Homo sapiens]
          Length = 790

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 1/102 (0%)

Query: 103 GVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRS- 161
           G  L +DP+    L +  I YN+   +          +   + LD     +  I +  S 
Sbjct: 403 GTVLAQDPDSTNSLVRYFINYNVEDDRFFNIDANTGTIRTTKVLDREETPWYNITVTASE 462

Query: 162 CNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQ 203
            + P L+     G+ + +V  + PEL  +  I + E  K  Q
Sbjct: 463 IDNPDLLSHVTVGIRVLDVNDNPPELAREYDIIVCENSKPGQ 504


>gi|38505215 zinc finger protein 614 [Homo sapiens]
          Length = 585

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 14/58 (24%), Positives = 28/58 (48%)

Query: 168 VGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQI 225
           +  P   ++ E+      +LI+ E I I E     Q ++++ ++ F   LK+   D+I
Sbjct: 201 IEKPHACIECEQTFLRKSQLIYHENICIQENPGSGQCEKLSRSVLFTKHLKTNTTDKI 258


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,919,059
Number of Sequences: 37866
Number of extensions: 573540
Number of successful extensions: 1276
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1267
Number of HSP's gapped (non-prelim): 9
length of query: 432
length of database: 18,247,518
effective HSP length: 105
effective length of query: 327
effective length of database: 14,271,588
effective search space: 4666809276
effective search space used: 4666809276
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.