Guide to the Human Genome
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Name: NUBPL Sequence: fasta or formatted (319aa) NCBI GI: 157384956
Description:

nucleotide binding protein-like

Referenced in:

Iron, Copper, and Arsenic Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         25           2
 C cysteine            1.3          4           1
 D aspartate           4.1         13           1
 E glutamate           4.4         14           2
 F phenylalanine       1.9          6           1
 G glycine            10.7         34           3
 H histidine           1.6          5           1
 I isoleucine          5.0         16           1
 K lysine              5.0         16           1
 L leucine            11.3         36           3
 M methionine          4.4         14           2
 N asparagine          2.8          9           1
 P proline             6.0         19           2
 Q glutamine           5.3         17           1
 R arginine            5.3         17           2
 S serine              7.5         24           2
 T threonine           3.4         11           2
 V valine             10.0         32           2
 W tryptophan          0.9          3           1
 Y tyrosine            1.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleotide binding protein-like 
NUBP1                 0.269   nucleotide binding protein 1 
NUBP2                 0.244   nucleotide binding protein 2 (MinD homolog, E. coli) ...
ALPK3                 0.012   alpha-kinase 3 
DCAF13                0.008   WD repeats and SOF1 domain containing 
CDC2L5                0.008   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.008   cell division cycle 2-like 5 isoform 2 
SLC22A8               0.007   solute carrier family 22 member 8 
EPS8                  0.007   epidermal growth factor receptor pathway substrate 8...
DNHD1                 0.005   dynein heavy chain domain 1 isoform 1 
KIR2DL4               0.005   killer cell immunoglobulin-like receptor, two domai...
DNHD1                 0.005   dynein heavy chain domain 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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