Guide to the Human Genome
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Name: TUBGCP5 Sequence: fasta or formatted (1024aa) NCBI GI: 156616297
Description:

tubulin, gamma complex associated protein 5 isoform a

Referenced in:

Tubulins and Microtubules

Other entries for this name:
alt prot [1024aa] tubulin, gamma complex associated protein 5 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         53           2
 C cysteine            1.5         15           2
 D aspartate           6.1         62           2
 E glutamate           8.0         82           3
 F phenylalanine       4.3         44           2
 G glycine             3.7         38           2
 H histidine           3.6         37           2
 I isoleucine          4.9         50           2
 K lysine              5.9         60           3
 L leucine            11.4        117           4
 M methionine          2.7         28           1
 N asparagine          3.6         37           2
 P proline             3.7         38           2
 Q glutamine           5.4         55           2
 R arginine            4.9         50           1
 S serine              8.2         84           2
 T threonine           4.9         50           2
 V valine              6.9         71           2
 W tryptophan          2.0         20           1
 Y tyrosine            3.2         33           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulin, gamma complex associated protein 5 isoform... 
TUBGCP5               0.989   tubulin, gamma complex associated protein 5 isoform...
TUBGCP6               0.038   tubulin, gamma complex associated protein 6 
TUBGCP3               0.027   tubulin, gamma complex associated protein 3 
TUBGCP2               0.013   tubulin, gamma complex associated protein 2 
TUBGCP4               0.012   tubulin, gamma complex associated protein 4 
DOCK2                 0.006   dedicator of cytokinesis 2 
CLSTN1                0.004   calsyntenin 1 isoform 1 
CLSTN1                0.004   calsyntenin 1 isoform 2 
EIF5B                 0.004   eukaryotic translation initiation factor 5B 
KIAA1109              0.003   fragile site-associated protein 
SNX16                 0.003   sorting nexin 16 isoform a 
SNX16                 0.003   sorting nexin 16 isoform a 
SNX16                 0.003   sorting nexin 16 isoform b 
TMEM87A               0.003   transmembrane protein 87A isoform 1 
CDC2L2                0.003   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.003   cell division cycle 2-like 2 isoform 1 
MACF1                 0.003   microfilament and actin filament cross-linker protei...
MACF1                 0.003   microfilament and actin filament cross-linker protei...
AGGF1                 0.003   angiogenic factor VG5Q 
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
WDR87                 0.003   NYD-SP11 protein 
PTPRN2                0.003   protein tyrosine phosphatase, receptor type, N poly...
PTPRN2                0.003   protein tyrosine phosphatase, receptor type, N poly...
PTPRN2                0.003   protein tyrosine phosphatase, receptor type, N poly...
ZNF608                0.003   zinc finger protein 608 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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