Guide to the Human Genome
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Name: ZNF223 Sequence: fasta or formatted (482aa) NCBI GI: 156547039
Description:

zinc finger protein 223

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.9         14           1
 C cysteine            6.0         29           1
 D aspartate           4.8         23           2
 E glutamate           7.1         34           3
 F phenylalanine       5.4         26           2
 G glycine             7.1         34           2
 H histidine           6.4         31           2
 I isoleucine          4.1         20           2
 K lysine              9.5         46           2
 L leucine             7.5         36           2
 M methionine          1.9          9           2
 N asparagine          2.9         14           1
 P proline             3.1         15           1
 Q glutamine           5.6         27           2
 R arginine            6.8         33           2
 S serine              8.1         39           2
 T threonine           4.4         21           1
 V valine              3.3         16           2
 W tryptophan          0.6          3           1
 Y tyrosine            2.5         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 223 
ZNF222                0.785   zinc finger protein 222 isoform 1 
ZNF155                0.760   zinc finger protein 155 
ZNF155                0.760   zinc finger protein 155 
ZNF230                0.757   zinc finger protein 230 
ZNF222                0.714   zinc finger protein 222 isoform 2 
ZNF221                0.665   zinc finger protein 221 
ZNF224                0.642   zinc finger protein 224 
ZNF284                0.619   zinc finger protein 284 
ZNF225                0.616   zinc finger protein 225 
ZNF234                0.569   zinc finger protein 234 
ZNF234                0.569   zinc finger protein 234 
ZNF45                 0.446   zinc finger protein 45 
ZNF226                0.414   zinc finger protein 226 isoform a 
ZNF226                0.414   zinc finger protein 226 isoform a 
ZNF235                0.398   zinc finger protein 93 homolog 
ZNF420                0.356   zinc finger protein 420 
ZNF66                 0.355   PREDICTED: zinc finger protein 66 
ZNF66                 0.355   PREDICTED: zinc finger protein 66 
ZNF66                 0.355   PREDICTED: zinc finger protein 66 
ZNF30                 0.353   zinc finger protein 30 isoform b 
ZNF227                0.353   zinc finger protein 227 
ZNF665                0.352   zinc finger protein 665 
ZNF85                 0.351   zinc finger protein 85 
ZNF708                0.351   zinc finger protein 708 
ZNF726                0.350   PREDICTED: zinc finger protein 726 
ZNF726                0.350   PREDICTED: zinc finger protein 726 
ZNF726                0.350   PREDICTED: zinc finger protein 726 
ZNF93                 0.350   zinc finger protein 93 
ZNF454                0.349   zinc finger protein 454 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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