Search of human proteins with 156523251

Search of human proteins with 156523251

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|156523251 melanocortin 2 receptor accessory protein 2 [Homo
sapiens]
         (205 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|156523251 melanocortin 2 receptor accessory protein 2 [Homo s...   415   e-116
gi|30520312 melanocortin 2 receptor accessory protein isoform al...    59   4e-09
gi|45827704 melanocortin 2 receptor accessory protein isoform be...    57   1e-08
gi|170932512 FERM domain containing 1 isoform 2 [Homo sapiens]         30   1.1  
gi|170932510 FERM domain containing 1 isoform 1 [Homo sapiens]         30   1.1  
gi|38569484 kinesin family member 21A [Homo sapiens]                   29   2.4  
gi|194097398 protein tyrosine phosphatase, receptor type, G prec...    29   3.2  

>gi|156523251 melanocortin 2 receptor accessory protein 2 [Homo
           sapiens]
          Length = 205

 Score =  415 bits (1067), Expect = e-116
 Identities = 205/205 (100%), Positives = 205/205 (100%)

Query: 1   MSAQRLISNRTSQQSASNSDYTWEYEYYEIGPVSFEGLKAHKYSIVIGFWVGLAVFVIFM 60
           MSAQRLISNRTSQQSASNSDYTWEYEYYEIGPVSFEGLKAHKYSIVIGFWVGLAVFVIFM
Sbjct: 1   MSAQRLISNRTSQQSASNSDYTWEYEYYEIGPVSFEGLKAHKYSIVIGFWVGLAVFVIFM 60

Query: 61  FFVLTLLTKTGAPHQDNAESSEKRFRMNSFVSDFGRPLEPDKVFSRQGNEESRSLFHCYI 120
           FFVLTLLTKTGAPHQDNAESSEKRFRMNSFVSDFGRPLEPDKVFSRQGNEESRSLFHCYI
Sbjct: 61  FFVLTLLTKTGAPHQDNAESSEKRFRMNSFVSDFGRPLEPDKVFSRQGNEESRSLFHCYI 120

Query: 121 NEVERLDRAKACHQTTALDSDVQLQEAIRSSGQPEEELNRLMKFDIPNFVNTDQNYFGED 180
           NEVERLDRAKACHQTTALDSDVQLQEAIRSSGQPEEELNRLMKFDIPNFVNTDQNYFGED
Sbjct: 121 NEVERLDRAKACHQTTALDSDVQLQEAIRSSGQPEEELNRLMKFDIPNFVNTDQNYFGED 180

Query: 181 DLLISEPPIVLETKPLSQTSHKDLD 205
           DLLISEPPIVLETKPLSQTSHKDLD
Sbjct: 181 DLLISEPPIVLETKPLSQTSHKDLD 205


>gi|30520312 melanocortin 2 receptor accessory protein isoform
          alpha [Homo sapiens]
          Length = 172

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 2/66 (3%)

Query: 15 SASNSDYTWEY--EYYEIGPVSFEGLKAHKYSIVIGFWVGLAVFVIFMFFVLTLLTKTGA 72
          +AS   Y++EY  +Y ++ PV  + LKAHK+SIVI FWV LA FV+ +F +L  ++ + +
Sbjct: 6  NASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYMSWSAS 65

Query: 73 PHQDNA 78
          P   N+
Sbjct: 66 PQMRNS 71


>gi|45827704 melanocortin 2 receptor accessory protein isoform
          beta [Homo sapiens]
          Length = 102

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)

Query: 15 SASNSDYTWEY--EYYEIGPVSFEGLKAHKYSIVIGFWVGLAVFVIFMFFVLTLLTKTGA 72
          +AS   Y++EY  +Y ++ PV  + LKAHK+SIVI FWV LA FV+ +F +L  ++ + +
Sbjct: 6  NASAPYYSYEYYLDYLDLIPVDEKKLKAHKHSIVIAFWVSLAAFVVLLFLILLYMSWSAS 65

Query: 73 P 73
          P
Sbjct: 66 P 66


>gi|170932512 FERM domain containing 1 isoform 2 [Homo sapiens]
          Length = 481

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 128 RAKACHQTTALDSDVQLQEA---IRSSGQPEEELNRLMKFDIPNFVNTDQNYFGEDDLLI 184
           R    H +T  DS    QE    +R+ GQ  E ++++ +      V+ +Q+  G DD+ +
Sbjct: 366 RTSRSHPSTRGDSQATRQEPCTQVRTRGQSAEAVHQIQEMTAG--VSEEQHSHGLDDMQL 423

Query: 185 SEPPIVLETKPLSQTSHKDLD 205
            +  +      LS T H+ LD
Sbjct: 424 HQLALHPAPTSLSHTFHRALD 444


>gi|170932510 FERM domain containing 1 isoform 1 [Homo sapiens]
          Length = 549

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 128 RAKACHQTTALDSDVQLQEA---IRSSGQPEEELNRLMKFDIPNFVNTDQNYFGEDDLLI 184
           R    H +T  DS    QE    +R+ GQ  E ++++ +      V+ +Q+  G DD+ +
Sbjct: 434 RTSRSHPSTRGDSQATRQEPCTQVRTRGQSAEAVHQIQEMTAG--VSEEQHSHGLDDMQL 491

Query: 185 SEPPIVLETKPLSQTSHKDLD 205
            +  +      LS T H+ LD
Sbjct: 492 HQLALHPAPTSLSHTFHRALD 512


>gi|38569484 kinesin family member 21A [Homo sapiens]
          Length = 1661

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 8/49 (16%)

Query: 84  RFRMNSFVSDFGRPLEPDKVFSR--QGNEESRSLFHCYINEVERLDRAK 130
           R R+   VSD     + + V +R  +GNEE  ++ H YI E+E L RAK
Sbjct: 450 RSRITQLVSD-----QANHVLARAGEGNEEISNMIHSYIKEIEDL-RAK 492


>gi|194097398 protein tyrosine phosphatase, receptor type, G
           precursor [Homo sapiens]
          Length = 1445

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 8/74 (10%)

Query: 135 TTALDSDVQLQEAIRSSGQPEEELNR--LMKFDIPNFVNTDQNYFGEDDL------LISE 186
           TT     V+  E +R++ +P++ L+   + K  + +  N D   F E+ L      + S 
Sbjct: 289 TTEQQDHVKSVEYLRNNFRPQQRLHDRVVSKSAVRDSWNHDMTDFLENPLGTEASKVCSS 348

Query: 187 PPIVLETKPLSQTS 200
           PPI ++ +PL+QT+
Sbjct: 349 PPIHMKVQPLNQTA 362


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,268,781
Number of Sequences: 37866
Number of extensions: 294523
Number of successful extensions: 851
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 848
Number of HSP's gapped (non-prelim): 7
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.