Guide to the Human Genome
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Name: FLJ21511 Sequence: fasta or formatted (699aa) NCBI GI: 156151386
Description:

hypothetical protein LOC80157

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         44           3
 C cysteine            1.1          8           1
 D aspartate           3.7         26           2
 E glutamate           4.3         30           2
 F phenylalanine       5.0         35           2
 G glycine             8.2         57           2
 H histidine           3.3         23           2
 I isoleucine          6.4         45           2
 K lysine              4.9         34           2
 L leucine            13.2         92           3
 M methionine          2.9         20           2
 N asparagine          3.7         26           2
 P proline             4.6         32           1
 Q glutamine           1.9         13           1
 R arginine            4.1         29           1
 S serine              8.0         56           3
 T threonine           5.9         41           1
 V valine              5.6         39           2
 W tryptophan          3.4         24           2
 Y tyrosine            3.6         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC80157 
ATP13A1               0.006   ATPase type 13A1 
C9orf5                0.006   hypothetical protein LOC23731 
AQP1                  0.005   aquaporin 1 
POL3S                 0.004   polyserase 3 
SLC22A4               0.004   solute carrier family 22 member 4 
HTR4                  0.004   serotonin 5-HT4 receptor isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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