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Search of human proteins with 156139141
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156139141 FAD-dependent oxidoreductase domain containing 2
[Homo sapiens]
(684 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156139141 FAD-dependent oxidoreductase domain containing 2 [H... 1401 0.0
gi|156139139 FAD-dependent oxidoreductase domain containing 2 [H... 1401 0.0
gi|221316678 flavin containing monooxygenase 5 isoform 3 [Homo s... 47 8e-05
gi|221316674 flavin containing monooxygenase 5 isoform 2 [Homo s... 47 8e-05
gi|221316672 flavin containing monooxygenase 5 isoform 1 [Homo s... 47 8e-05
gi|4503759 flavin containing monooxygenase 4 [Homo sapiens] 39 0.012
gi|4503755 flavin containing monooxygenase 1 [Homo sapiens] 39 0.012
gi|4503757 flavin containing monooxygenase 2 (non-functional) [H... 37 0.061
gi|50541961 flavin containing monooxygenase 3 isoform 2 [Homo sa... 36 0.13
gi|50541965 flavin containing monooxygenase 3 isoform 1 [Homo sa... 36 0.13
gi|229577391 pyridine nucleotide-disulphide oxidoreductase domai... 34 0.39
gi|15055535 bactericidal/permeability-increasing protein-like 1 ... 34 0.39
gi|122937205 carcinoembryonic antigen-related cell adhesion mole... 34 0.39
gi|54859722 nucleoporin 160kDa [Homo sapiens] 33 0.87
gi|203098013 all-trans-13,14-dihydroretinol saturase [Homo sapiens] 30 5.7
gi|21389483 leucine-rich repeats and guanylate kinase domain con... 30 7.4
gi|24797151 dimethylglycine dehydrogenase precursor [Homo sapiens] 30 9.7
>gi|156139141 FAD-dependent oxidoreductase domain containing 2 [Homo
sapiens]
Length = 684
Score = 1401 bits (3626), Expect = 0.0
Identities = 684/684 (100%), Positives = 684/684 (100%)
Query: 1 MGLSAAAPLWGPPGLLLAIALHPALSVPPRRDYCVLGAGPAGLQMAYFLQRAGRDYAVFE 60
MGLSAAAPLWGPPGLLLAIALHPALSVPPRRDYCVLGAGPAGLQMAYFLQRAGRDYAVFE
Sbjct: 1 MGLSAAAPLWGPPGLLLAIALHPALSVPPRRDYCVLGAGPAGLQMAYFLQRAGRDYAVFE 60
Query: 61 RAPRPGSFFTRYPRHRKLISINKRYTGKANAEFNLRHDWNSLLSHDPRLLFRHYSRAYFP 120
RAPRPGSFFTRYPRHRKLISINKRYTGKANAEFNLRHDWNSLLSHDPRLLFRHYSRAYFP
Sbjct: 61 RAPRPGSFFTRYPRHRKLISINKRYTGKANAEFNLRHDWNSLLSHDPRLLFRHYSRAYFP 120
Query: 121 DARDMVRYLGDFADTLGLRVQYNTTIAHVTLDKDRQAWNGHYFILTDQKGQVHQCSVLFV 180
DARDMVRYLGDFADTLGLRVQYNTTIAHVTLDKDRQAWNGHYFILTDQKGQVHQCSVLFV
Sbjct: 121 DARDMVRYLGDFADTLGLRVQYNTTIAHVTLDKDRQAWNGHYFILTDQKGQVHQCSVLFV 180
Query: 181 ATGLSVPNQVDFPGSEYAEGYESVSVDPEDFVGQNVLILGRGNSAFETAENILGVTNFIH 240
ATGLSVPNQVDFPGSEYAEGYESVSVDPEDFVGQNVLILGRGNSAFETAENILGVTNFIH
Sbjct: 181 ATGLSVPNQVDFPGSEYAEGYESVSVDPEDFVGQNVLILGRGNSAFETAENILGVTNFIH 240
Query: 241 MLSRSRVRLSWATHYVGDLRAINNGLLDTYQLKSLDGLLESDLTDLAILKDSKGKFHVTP 300
MLSRSRVRLSWATHYVGDLRAINNGLLDTYQLKSLDGLLESDLTDLAILKDSKGKFHVTP
Sbjct: 241 MLSRSRVRLSWATHYVGDLRAINNGLLDTYQLKSLDGLLESDLTDLAILKDSKGKFHVTP 300
Query: 301 KFFLEEANTNQSADSITLPQDDNDNFAMRVPYDRVIRCLGWNFDFSIFNKSLRLNSGNAF 360
KFFLEEANTNQSADSITLPQDDNDNFAMRVPYDRVIRCLGWNFDFSIFNKSLRLNSGNAF
Sbjct: 301 KFFLEEANTNQSADSITLPQDDNDNFAMRVPYDRVIRCLGWNFDFSIFNKSLRLNSGNAF 360
Query: 361 GKKYPLIRASYESKGSRGLFILGTASHSVDYRKSAGGFIHGFRYTVRAVHRLLEHRHHSV 420
GKKYPLIRASYESKGSRGLFILGTASHSVDYRKSAGGFIHGFRYTVRAVHRLLEHRHHSV
Sbjct: 361 GKKYPLIRASYESKGSRGLFILGTASHSVDYRKSAGGFIHGFRYTVRAVHRLLEHRHHSV 420
Query: 421 TWPATELPITQLTSSIVRRVNEASGLYQMFGVLADVILLKENSTAFEYLEEFPIQMLAQL 480
TWPATELPITQLTSSIVRRVNEASGLYQMFGVLADVILLKENSTAFEYLEEFPIQMLAQL
Sbjct: 421 TWPATELPITQLTSSIVRRVNEASGLYQMFGVLADVILLKENSTAFEYLEEFPIQMLAQL 480
Query: 481 ETLTGRKAKHGLFVINMEYGRNFSGPDKDVFFDDRSVGHTEDAWQSNFLHPVIYYYRYLP 540
ETLTGRKAKHGLFVINMEYGRNFSGPDKDVFFDDRSVGHTEDAWQSNFLHPVIYYYRYLP
Sbjct: 481 ETLTGRKAKHGLFVINMEYGRNFSGPDKDVFFDDRSVGHTEDAWQSNFLHPVIYYYRYLP 540
Query: 541 TEQEVRFRPAHWPLPRPTAIHHIVEDFLTDWTAPIGHILPLRRFLENCLDTDLRSFYAES 600
TEQEVRFRPAHWPLPRPTAIHHIVEDFLTDWTAPIGHILPLRRFLENCLDTDLRSFYAES
Sbjct: 541 TEQEVRFRPAHWPLPRPTAIHHIVEDFLTDWTAPIGHILPLRRFLENCLDTDLRSFYAES 600
Query: 601 CFLFALTRQKLPPFCQQGYLRMQGLVSTESLWQHRVESRLLRDYAPTGRRLEDSSQQLGD 660
CFLFALTRQKLPPFCQQGYLRMQGLVSTESLWQHRVESRLLRDYAPTGRRLEDSSQQLGD
Sbjct: 601 CFLFALTRQKLPPFCQQGYLRMQGLVSTESLWQHRVESRLLRDYAPTGRRLEDSSQQLGD 660
Query: 661 QEPLGSPLAPGPLAQSVDSNKEEL 684
QEPLGSPLAPGPLAQSVDSNKEEL
Sbjct: 661 QEPLGSPLAPGPLAQSVDSNKEEL 684
>gi|156139139 FAD-dependent oxidoreductase domain containing 2 [Homo
sapiens]
Length = 684
Score = 1401 bits (3626), Expect = 0.0
Identities = 684/684 (100%), Positives = 684/684 (100%)
Query: 1 MGLSAAAPLWGPPGLLLAIALHPALSVPPRRDYCVLGAGPAGLQMAYFLQRAGRDYAVFE 60
MGLSAAAPLWGPPGLLLAIALHPALSVPPRRDYCVLGAGPAGLQMAYFLQRAGRDYAVFE
Sbjct: 1 MGLSAAAPLWGPPGLLLAIALHPALSVPPRRDYCVLGAGPAGLQMAYFLQRAGRDYAVFE 60
Query: 61 RAPRPGSFFTRYPRHRKLISINKRYTGKANAEFNLRHDWNSLLSHDPRLLFRHYSRAYFP 120
RAPRPGSFFTRYPRHRKLISINKRYTGKANAEFNLRHDWNSLLSHDPRLLFRHYSRAYFP
Sbjct: 61 RAPRPGSFFTRYPRHRKLISINKRYTGKANAEFNLRHDWNSLLSHDPRLLFRHYSRAYFP 120
Query: 121 DARDMVRYLGDFADTLGLRVQYNTTIAHVTLDKDRQAWNGHYFILTDQKGQVHQCSVLFV 180
DARDMVRYLGDFADTLGLRVQYNTTIAHVTLDKDRQAWNGHYFILTDQKGQVHQCSVLFV
Sbjct: 121 DARDMVRYLGDFADTLGLRVQYNTTIAHVTLDKDRQAWNGHYFILTDQKGQVHQCSVLFV 180
Query: 181 ATGLSVPNQVDFPGSEYAEGYESVSVDPEDFVGQNVLILGRGNSAFETAENILGVTNFIH 240
ATGLSVPNQVDFPGSEYAEGYESVSVDPEDFVGQNVLILGRGNSAFETAENILGVTNFIH
Sbjct: 181 ATGLSVPNQVDFPGSEYAEGYESVSVDPEDFVGQNVLILGRGNSAFETAENILGVTNFIH 240
Query: 241 MLSRSRVRLSWATHYVGDLRAINNGLLDTYQLKSLDGLLESDLTDLAILKDSKGKFHVTP 300
MLSRSRVRLSWATHYVGDLRAINNGLLDTYQLKSLDGLLESDLTDLAILKDSKGKFHVTP
Sbjct: 241 MLSRSRVRLSWATHYVGDLRAINNGLLDTYQLKSLDGLLESDLTDLAILKDSKGKFHVTP 300
Query: 301 KFFLEEANTNQSADSITLPQDDNDNFAMRVPYDRVIRCLGWNFDFSIFNKSLRLNSGNAF 360
KFFLEEANTNQSADSITLPQDDNDNFAMRVPYDRVIRCLGWNFDFSIFNKSLRLNSGNAF
Sbjct: 301 KFFLEEANTNQSADSITLPQDDNDNFAMRVPYDRVIRCLGWNFDFSIFNKSLRLNSGNAF 360
Query: 361 GKKYPLIRASYESKGSRGLFILGTASHSVDYRKSAGGFIHGFRYTVRAVHRLLEHRHHSV 420
GKKYPLIRASYESKGSRGLFILGTASHSVDYRKSAGGFIHGFRYTVRAVHRLLEHRHHSV
Sbjct: 361 GKKYPLIRASYESKGSRGLFILGTASHSVDYRKSAGGFIHGFRYTVRAVHRLLEHRHHSV 420
Query: 421 TWPATELPITQLTSSIVRRVNEASGLYQMFGVLADVILLKENSTAFEYLEEFPIQMLAQL 480
TWPATELPITQLTSSIVRRVNEASGLYQMFGVLADVILLKENSTAFEYLEEFPIQMLAQL
Sbjct: 421 TWPATELPITQLTSSIVRRVNEASGLYQMFGVLADVILLKENSTAFEYLEEFPIQMLAQL 480
Query: 481 ETLTGRKAKHGLFVINMEYGRNFSGPDKDVFFDDRSVGHTEDAWQSNFLHPVIYYYRYLP 540
ETLTGRKAKHGLFVINMEYGRNFSGPDKDVFFDDRSVGHTEDAWQSNFLHPVIYYYRYLP
Sbjct: 481 ETLTGRKAKHGLFVINMEYGRNFSGPDKDVFFDDRSVGHTEDAWQSNFLHPVIYYYRYLP 540
Query: 541 TEQEVRFRPAHWPLPRPTAIHHIVEDFLTDWTAPIGHILPLRRFLENCLDTDLRSFYAES 600
TEQEVRFRPAHWPLPRPTAIHHIVEDFLTDWTAPIGHILPLRRFLENCLDTDLRSFYAES
Sbjct: 541 TEQEVRFRPAHWPLPRPTAIHHIVEDFLTDWTAPIGHILPLRRFLENCLDTDLRSFYAES 600
Query: 601 CFLFALTRQKLPPFCQQGYLRMQGLVSTESLWQHRVESRLLRDYAPTGRRLEDSSQQLGD 660
CFLFALTRQKLPPFCQQGYLRMQGLVSTESLWQHRVESRLLRDYAPTGRRLEDSSQQLGD
Sbjct: 601 CFLFALTRQKLPPFCQQGYLRMQGLVSTESLWQHRVESRLLRDYAPTGRRLEDSSQQLGD 660
Query: 661 QEPLGSPLAPGPLAQSVDSNKEEL 684
QEPLGSPLAPGPLAQSVDSNKEEL
Sbjct: 661 QEPLGSPLAPGPLAQSVDSNKEEL 684
>gi|221316678 flavin containing monooxygenase 5 isoform 3 [Homo
sapiens]
Length = 285
Score = 46.6 bits (109), Expect = 8e-05
Identities = 60/247 (24%), Positives = 101/247 (40%), Gaps = 40/247 (16%)
Query: 30 RRDYCVLGAGPAGLQMAYFLQRAGRDYAVFERAPRPGSF--FTRYPRHRKLISINKRYTG 87
++ V+G G +GL G + FER G F P + SI K
Sbjct: 3 KKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRA-SIYKSVII 61
Query: 88 KANAEFNLRHDWNSLLSHDPRLL--------FRHYSRAYFPDARDMVRYLGDFADTLGLR 139
+ E D+ + H P + FR Y++ + D+++Y
Sbjct: 62 NTSKEMMCFSDY-PIPDHYPNFMHNAQVLEYFRMYAKEF-----DLLKY----------- 104
Query: 140 VQYNTTIAHVTLDKDRQAWNGHYFILTDQKG--QVHQCSVLFVATGLSVPNQV---DFPG 194
+++ TT+ V D A +G + ++T+ +G +++ + V TG + FPG
Sbjct: 105 IRFKTTVCSVKKQPDF-ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPG 163
Query: 195 SEYAEGYESVSVD---PEDFVGQNVLILGRGNSAFETAENILGVTNFIHMLSRSRVRLSW 251
E +G S D PE F G+ V+I+G GNS + A I + + +R R +W
Sbjct: 164 IEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTR---RGAW 220
Query: 252 ATHYVGD 258
+ VGD
Sbjct: 221 ILNRVGD 227
>gi|221316674 flavin containing monooxygenase 5 isoform 2 [Homo
sapiens]
Length = 464
Score = 46.6 bits (109), Expect = 8e-05
Identities = 60/247 (24%), Positives = 101/247 (40%), Gaps = 40/247 (16%)
Query: 30 RRDYCVLGAGPAGLQMAYFLQRAGRDYAVFERAPRPGSF--FTRYPRHRKLISINKRYTG 87
++ V+G G +GL G + FER G F P + SI K
Sbjct: 3 KKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRA-SIYKSVII 61
Query: 88 KANAEFNLRHDWNSLLSHDPRLL--------FRHYSRAYFPDARDMVRYLGDFADTLGLR 139
+ E D+ + H P + FR Y++ + D+++Y
Sbjct: 62 NTSKEMMCFSDY-PIPDHYPNFMHNAQVLEYFRMYAKEF-----DLLKY----------- 104
Query: 140 VQYNTTIAHVTLDKDRQAWNGHYFILTDQKG--QVHQCSVLFVATGLSVPNQV---DFPG 194
+++ TT+ V D A +G + ++T+ +G +++ + V TG + FPG
Sbjct: 105 IRFKTTVCSVKKQPDF-ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPG 163
Query: 195 SEYAEGYESVSVD---PEDFVGQNVLILGRGNSAFETAENILGVTNFIHMLSRSRVRLSW 251
E +G S D PE F G+ V+I+G GNS + A I + + +R R +W
Sbjct: 164 IEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTR---RGAW 220
Query: 252 ATHYVGD 258
+ VGD
Sbjct: 221 ILNRVGD 227
>gi|221316672 flavin containing monooxygenase 5 isoform 1 [Homo
sapiens]
Length = 533
Score = 46.6 bits (109), Expect = 8e-05
Identities = 60/247 (24%), Positives = 101/247 (40%), Gaps = 40/247 (16%)
Query: 30 RRDYCVLGAGPAGLQMAYFLQRAGRDYAVFERAPRPGSF--FTRYPRHRKLISINKRYTG 87
++ V+G G +GL G + FER G F P + SI K
Sbjct: 3 KKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRA-SIYKSVII 61
Query: 88 KANAEFNLRHDWNSLLSHDPRLL--------FRHYSRAYFPDARDMVRYLGDFADTLGLR 139
+ E D+ + H P + FR Y++ + D+++Y
Sbjct: 62 NTSKEMMCFSDY-PIPDHYPNFMHNAQVLEYFRMYAKEF-----DLLKY----------- 104
Query: 140 VQYNTTIAHVTLDKDRQAWNGHYFILTDQKG--QVHQCSVLFVATGLSVPNQV---DFPG 194
+++ TT+ V D A +G + ++T+ +G +++ + V TG + FPG
Sbjct: 105 IRFKTTVCSVKKQPDF-ATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFPG 163
Query: 195 SEYAEGYESVSVD---PEDFVGQNVLILGRGNSAFETAENILGVTNFIHMLSRSRVRLSW 251
E +G S D PE F G+ V+I+G GNS + A I + + +R R +W
Sbjct: 164 IEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTR---RGAW 220
Query: 252 ATHYVGD 258
+ VGD
Sbjct: 221 ILNRVGD 227
>gi|4503759 flavin containing monooxygenase 4 [Homo sapiens]
Length = 558
Score = 39.3 bits (90), Expect = 0.012
Identities = 79/355 (22%), Positives = 136/355 (38%), Gaps = 55/355 (15%)
Query: 35 VLGAGPAGLQMAYFLQRAGRDYAVFERAPRPGSF--FTR-----YPRHRKLISINKRYTG 87
V+GAG +GL + FER+ G FT R K + N
Sbjct: 7 VIGAGVSGLSSIKCCVDEDLEPTCFERSDDIGGLWKFTESSKDGMTRVYKSLVTNVCKEM 66
Query: 88 KANAEFNLRHDWNSLLSHDPRLLFRHYSRAYFPDARDMVRYLGDFADTLGLRVQYNTTIA 147
++F D+ + ++H+ F Y + F + D+++Y +Q+ TT+
Sbjct: 67 SCYSDFPFHEDYPNFMNHEK---FWDYLQE-FAEHFDLLKY-----------IQFKTTVC 111
Query: 148 HVTLDKDRQAWNGHYFILTDQKGQVHQC--SVLFVATGLSVPNQVD---FPGSEYAEGYE 202
+T D G + ++T+ +G+ ++ + V TG + + FPG +G
Sbjct: 112 SITKRPDFSE-TGQWDVVTETEGKQNRAVFDAVMVCTGHFLNPHLPLEAFPGIHKFKGQI 170
Query: 203 SVSVD---PEDFVGQNVLILGRGNSAFE--------TAENILGVTNFIHMLSRSRVRLSW 251
S + PE F G+ VL++G GN+ + A+ +L +L RS W
Sbjct: 171 LHSQEYKIPEGFQGKRVLVIGLGNTGGDIAVELSRTAAQVLLSTRTGTWVLGRSS---DW 227
Query: 252 ATHYVGDL---------RAINNGLLDTYQLKSLDGLLESDLTDLAILKDSKGKFHVT--- 299
Y + + + + L+ Q + L+ + L+I K K KF V
Sbjct: 228 GYPYNMMVTRRCCSFIAQVLPSRFLNWIQERKLNKRFNHEDYGLSITKGKKAKFIVNDEL 287
Query: 300 PKFFLEEANT-NQSADSITLPQDDNDNFAMRVPYDRVIRCLGWNFDFSIFNKSLR 353
P L A T S T ++ + D VI G+ F F F + L+
Sbjct: 288 PNCILCGAITMKTSVIEFTETSAVFEDGTVEENIDVVIFTTGYTFSFPFFEEPLK 342
>gi|4503755 flavin containing monooxygenase 1 [Homo sapiens]
Length = 532
Score = 39.3 bits (90), Expect = 0.012
Identities = 86/372 (23%), Positives = 144/372 (38%), Gaps = 65/372 (17%)
Query: 35 VLGAGPAGLQMAYFLQRAGRDYAVFERAPRPGSFFTRYPRHRK--LISINKRYTGKANAE 92
++GAG +GL G + FER+ G + R+ H + S+ K + E
Sbjct: 7 IVGAGVSGLASIKCCLEEGLEPTCFERSDDLGGLW-RFTEHVEEGRASLYKSVVSNSCKE 65
Query: 93 FNLRHDWNSLLSHDPRLLFRHYSRAYFPDARDMVRYLGDFADTLGL--RVQYNTTIAHVT 150
+ D+ F Y P+++ + YL +A+ L +Q+ T + VT
Sbjct: 66 MSCYSDFP----------FPEDYPNYVPNSQ-FLEYLKMYANHFDLLKHIQFKTKVCSVT 114
Query: 151 LDKDRQAWNGHYFILT--DQKGQVHQCSVLFVATGLSVPNQV---DFPGSEYAEG---YE 202
D A +G + ++T ++K + + V TG + FPG +G +
Sbjct: 115 KCSD-SAVSGQWEVVTMHEEKQESAIFDAVMVCTGFLTNPYLPLDSFPGINAFKGQYFHS 173
Query: 203 SVSVDPEDFVGQNVLILGRGNS-------AFETAENI-LGVTNFIHMLSR---------- 244
P+ F + VL++G GNS A AE + L T ++SR
Sbjct: 174 RQYKHPDIFKDKRVLVIGMGNSGTDIAVEASHLAEKVFLSTTGGGWVISRIFDSGYPWDM 233
Query: 245 -------SRVRLSWATHYVGDL--RAINNGLLDTYQLKSLDGLLESDLTDLA--ILKDSK 293
+ +R S T V L R INN L GL+ D T L +L D
Sbjct: 234 VFMTRFQNMLRNSLPTPIVTWLMERKINNWLNHANY-----GLIPEDRTQLKEFVLNDEL 288
Query: 294 GKFHVTPKFFLEEANTNQSADSITLPQDDNDNFAMRVPYDRVIRCLGWNFDFSIFNKS-L 352
+T K F+ + +S+ +N + P D ++ G+ F F ++S +
Sbjct: 289 PGRIITGKVFIRPSIKEVKENSVIF-----NNTSKEEPIDIIVFATGYTFAFPFLDESVV 343
Query: 353 RLNSGNAFGKKY 364
++ G A KY
Sbjct: 344 KVEDGQASLYKY 355
>gi|4503757 flavin containing monooxygenase 2 (non-functional) [Homo
sapiens]
Length = 471
Score = 37.0 bits (84), Expect = 0.061
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 37/213 (17%)
Query: 35 VLGAGPAGLQMAYFLQRAGRDYAVFERAPRPGSFFT--------RYPRHRKLISINKRYT 86
V+GAG +GL G + FER G + R ++ +++ N
Sbjct: 7 VIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGVWRFKENVEDGRASIYQSVVT-NTSKE 65
Query: 87 GKANAEFNLRHDWNSLLSHDPRLL--FRHYSRAYFPDARDMVRYLGDFADTLGLRVQYNT 144
++F + D+ + L H+ +LL FR +++ + D+++Y +Q+ T
Sbjct: 66 MSCFSDFPMPEDFPNFL-HNSKLLEYFRIFAKKF-----DLLKY-----------IQFQT 108
Query: 145 TIAHVTLDKDRQAWNGHYFILTDQKGQVHQC--SVLFVATGLSVPNQV---DFPGSEYAE 199
T+ V D + +G + ++T G+ + V +G + + FPG E +
Sbjct: 109 TVLSVRKCPDFSS-SGQWKVVTQSNGKEQSAVFDAVMVCSGHHILPHIPLKSFPGMERFK 167
Query: 200 G---YESVSVDPEDFVGQNVLILGRGNSAFETA 229
G + P+ F G+ +L++G GNS + A
Sbjct: 168 GQYFHSRQYKHPDGFEGKRILVIGMGNSGSDIA 200
>gi|50541961 flavin containing monooxygenase 3 isoform 2 [Homo
sapiens]
Length = 532
Score = 35.8 bits (81), Expect = 0.13
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 30/275 (10%)
Query: 35 VLGAGPAGLQMAYFLQRAGRDYAVFERAPRPGSFFTRYPRHRK--LISINKRYTGKANAE 92
++GAG +GL G + FE++ G + ++ H + SI K ++ E
Sbjct: 7 IIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLW-KFSDHAEEGRASIYKSVFSNSSKE 65
Query: 93 FNLRHDWNSLLSHDPRLLFRHYSRAY---FPDARDMVRYLGDFADTLGLRVQYNTTIAHV 149
D+ P + + Y F +++++Y +Q+ T ++ V
Sbjct: 66 MMCFPDF-PFPDDFPNFMHNSKIQEYIIAFAKEKNLLKY-----------IQFKTFVSSV 113
Query: 150 TLDKDRQAWNGHYFILTDQKGQVHQC--SVLFVATGLSV-PN--QVDFPGSEYAEGYESV 204
D A G + + T++ G+ + V +G V PN + FPG + +G
Sbjct: 114 NKHPDF-ATTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFH 172
Query: 205 SVD---PEDFVGQNVLILGRGNSAFETAENILGVTNFIHMLSRSRVRLSWATHYVGDLRA 261
S D P F G+ VL++G GNS + A + + + SRS SW V D
Sbjct: 173 SRDYKEPGVFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSG---SWVMSRVWDNGY 229
Query: 262 INNGLLDTYQLKSLDGLLESDLTDLAILKDSKGKF 296
+ LL T L L + ++D +K +F
Sbjct: 230 PWDMLLVTRFGTFLKNNLPTAISDWLYVKQMNARF 264
>gi|50541965 flavin containing monooxygenase 3 isoform 1 [Homo
sapiens]
Length = 532
Score = 35.8 bits (81), Expect = 0.13
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 30/275 (10%)
Query: 35 VLGAGPAGLQMAYFLQRAGRDYAVFERAPRPGSFFTRYPRHRK--LISINKRYTGKANAE 92
++GAG +GL G + FE++ G + ++ H + SI K ++ E
Sbjct: 7 IIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLW-KFSDHAEEGRASIYKSVFSNSSKE 65
Query: 93 FNLRHDWNSLLSHDPRLLFRHYSRAY---FPDARDMVRYLGDFADTLGLRVQYNTTIAHV 149
D+ P + + Y F +++++Y +Q+ T ++ V
Sbjct: 66 MMCFPDF-PFPDDFPNFMHNSKIQEYIIAFAKEKNLLKY-----------IQFKTFVSSV 113
Query: 150 TLDKDRQAWNGHYFILTDQKGQVHQC--SVLFVATGLSV-PN--QVDFPGSEYAEGYESV 204
D A G + + T++ G+ + V +G V PN + FPG + +G
Sbjct: 114 NKHPDF-ATTGQWDVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFH 172
Query: 205 SVD---PEDFVGQNVLILGRGNSAFETAENILGVTNFIHMLSRSRVRLSWATHYVGDLRA 261
S D P F G+ VL++G GNS + A + + + SRS SW V D
Sbjct: 173 SRDYKEPGVFNGKRVLVVGLGNSGCDIATELSRTAEQVMISSRSG---SWVMSRVWDNGY 229
Query: 262 INNGLLDTYQLKSLDGLLESDLTDLAILKDSKGKF 296
+ LL T L L + ++D +K +F
Sbjct: 230 PWDMLLVTRFGTFLKNNLPTAISDWLYVKQMNARF 264
>gi|229577391 pyridine nucleotide-disulphide oxidoreductase domain
2 [Homo sapiens]
Length = 581
Score = 34.3 bits (77), Expect = 0.39
Identities = 18/33 (54%), Positives = 21/33 (63%)
Query: 29 PRRDYCVLGAGPAGLQMAYFLQRAGRDYAVFER 61
P D V+GAG GL A +LQR G + AVFER
Sbjct: 33 PEYDAVVIGAGHNGLVAAAYLQRLGVNTAVFER 65
>gi|15055535 bactericidal/permeability-increasing protein-like 1
[Homo sapiens]
Length = 458
Score = 34.3 bits (77), Expect = 0.39
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 223 NSAFETAENILGVTNFIHMLSRSRVRLSWATHYVGDLR----AINNGLLDTYQLKSLDG- 277
NSAF++ ++ V N LS S+V+L T +GD++ + N G +DT Q+++L G
Sbjct: 349 NSAFQSLFSLDVVVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSNVGFIDTDQVRTLMGT 408
Query: 278 LLESDLTD 285
+ E L D
Sbjct: 409 VFEKPLLD 416
>gi|122937205 carcinoembryonic antigen-related cell adhesion
molecule 18 [Homo sapiens]
Length = 398
Score = 34.3 bits (77), Expect = 0.39
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 312 SADSITLPQDDNDNFAMRVP-YDRVIRCLGWNFDFSIFNKSLRLNSGNAFGKKYPLIRAS 370
S+D +T+ D +RV YDR I+C+ +F IF +S R++ A+G Y L+R++
Sbjct: 238 SSDRMTISPDGKTLVILRVSRYDRTIQCMIESFP-EIFQRSERISLTVAYGPDYVLLRSN 296
>gi|54859722 nucleoporin 160kDa [Homo sapiens]
Length = 1436
Score = 33.1 bits (74), Expect = 0.87
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 14/81 (17%)
Query: 589 LDTDLRSFYAESCFLFALTRQKLPPFCQQGYLRMQGLVSTESLWQHRVESRLLRDYAPTG 648
L +D + +A C + KLPP+ + G+VS L Q V RLL + PT
Sbjct: 221 LSSDGEALFALPCASGGIFVLKLPPY------DIPGMVSVVELKQSSVMQRLLTGWMPTA 274
Query: 649 RRLEDSSQQLGDQEPLGSPLA 669
R GDQ P PL+
Sbjct: 275 IR--------GDQSPSDRPLS 287
>gi|203098013 all-trans-13,14-dihydroretinol saturase [Homo sapiens]
Length = 610
Score = 30.4 bits (67), Expect = 5.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 24 ALSVPPRRDYCVLGAGPAGLQMAYFLQRAGRDYAVFERAPRPG 66
A VP + D V+G+G GL A L +AG+ V E+ + G
Sbjct: 61 ANQVPEKLDVVVIGSGFGGLAAAAILAKAGKRVLVLEQHTKAG 103
>gi|21389483 leucine-rich repeats and guanylate kinase domain
containing [Homo sapiens]
Length = 825
Score = 30.0 bits (66), Expect = 7.4
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 215 NVLILGRGNSAFETAENILGVTNFIHMLSRSRVRLSWATHYVGDLRAINNGLLDTYQLKS 274
N++ L N+ T + + I LS +++ + DL+A+ N L Q+ S
Sbjct: 238 NLIHLSLANNKITTINGLNKLPIKILCLSNNQIEMITGLE---DLKALQNLDLSHNQISS 294
Query: 275 LDGLLESDLTDLAILKDSK 293
L GL DL ++ L+D+K
Sbjct: 295 LQGLENHDLLEVINLEDNK 313
>gi|24797151 dimethylglycine dehydrogenase precursor [Homo
sapiens]
Length = 866
Score = 29.6 bits (65), Expect = 9.7
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 3 LSAAAPLWGPPGLLLAIALHPALSVPP---------RRDYCVLGAGPAGLQMAYFLQRAG 53
L + PL G PG ++ PP R + ++G G G+ +AY L +AG
Sbjct: 13 LLRSCPLQGSPGRPRSVCGREGEEKPPLSAETQWKDRAETVIIGGGCVGVSLAYHLAKAG 72
Query: 54 -RDYAVFERA 62
+D + E++
Sbjct: 73 MKDVVLLEKS 82
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,255,748
Number of Sequences: 37866
Number of extensions: 1277243
Number of successful extensions: 2795
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2790
Number of HSP's gapped (non-prelim): 18
length of query: 684
length of database: 18,247,518
effective HSP length: 109
effective length of query: 575
effective length of database: 14,120,124
effective search space: 8119071300
effective search space used: 8119071300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.