Guide to the Human Genome
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Name: IQCE Sequence: fasta or formatted (695aa) NCBI GI: 154813191
Description:

IQ motif containing E isoform 1

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt prot [679aa] IQ motif containing E isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         58           3
 C cysteine            1.0          7           1
 D aspartate           5.6         39           2
 E glutamate           8.8         61           3
 F phenylalanine       1.2          8           1
 G glycine             4.9         34           2
 H histidine           2.6         18           1
 I isoleucine          2.3         16           2
 K lysine              8.1         56           4
 L leucine            10.6         74           2
 M methionine          1.4         10           1
 N asparagine          1.3          9           1
 P proline             7.9         55           3
 Q glutamine           4.7         33           2
 R arginine            8.2         57           3
 S serine              9.4         65           3
 T threonine           6.5         45           3
 V valine              5.0         35           2
 W tryptophan          1.2          8           1
 Y tyrosine            1.0          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   IQ motif containing E isoform 1 
IQCE                  0.970   IQ motif containing E isoform 2 
MYH10                 0.037   myosin, heavy polypeptide 10, non-muscle 
GOLGB1                0.035   golgi autoantigen, golgin subfamily b, macrogolgin ...
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.035   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH14                 0.032   myosin, heavy chain 14 isoform 1 
MYH14                 0.032   myosin, heavy chain 14 isoform 2 
MYH14                 0.032   myosin, heavy chain 14 isoform 3 
MYH9                  0.031   myosin, heavy polypeptide 9, non-muscle 
ERC1                  0.031   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.031   RAB6-interacting protein 2 isoform delta 
LOC283767             0.030   golgi autoantigen, golgin subfamily a-like 
CCDC123               0.028   coiled-coil domain containing 123 
EEA1                  0.027   early endosome antigen 1, 162kD 
LOC645202             0.027   PREDICTED: hypothetical protein LOC645202 
MYH13                 0.027   myosin, heavy polypeptide 13, skeletal muscle [Homo...
FYCO1                 0.027   FYVE and coiled-coil domain containing 1 
MYH7                  0.027   myosin, heavy chain 7, cardiac muscle, beta 
CEP250                0.027   centrosomal protein 2 
LOC440243             0.026   PREDICTED: Putative golgin subfamily A member 6-lik...
AKAP9                 0.026   A-kinase anchor protein 9 isoform 3 
GOLGA2                0.025   Golgi autoantigen, golgin subfamily a, 2 
WDR87                 0.025   NYD-SP11 protein 
PLEC1                 0.025   plectin 1 isoform 11 
PLEC1                 0.025   plectin 1 isoform 10 
PLEC1                 0.025   plectin 1 isoform 8 
PLEC1                 0.025   plectin 1 isoform 7 
PLEC1                 0.025   plectin 1 isoform 6 
PLEC1                 0.025   plectin 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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