Guide to the Human Genome
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Search of human proteins with 154707844

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|154707844 transmembrane protein 91 isoform a [Homo sapiens]
         (172 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|154707844 transmembrane protein 91 isoform a [Homo sapiens]        352   7e-98
gi|149588708 transmembrane protein 91 isoform c [Homo sapiens]        254   3e-68
gi|149588687 transmembrane protein 91 isoform c [Homo sapiens]        254   3e-68
gi|110578660 transmembrane protein 91 isoform b [Homo sapiens]        252   1e-67
gi|149588874 transmembrane protein 91 isoform d [Homo sapiens]        252   1e-67
gi|149588540 transmembrane protein 91 isoform e [Homo sapiens]        252   1e-67
gi|13376347 hypothetical protein LOC79953 [Homo sapiens]              100   6e-22
gi|157743286 transmembrane protein 90A [Homo sapiens]                  98   3e-21
gi|77681565 NG5 protein [Homo sapiens]                                 59   2e-09
gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]       51   6e-07
gi|110578657 LOST1 [Homo sapiens]                                      40   8e-04
gi|211904185 hypothetical protein LOC387890 [Homo sapiens]             35   0.024
gi|169178462 PREDICTED: similar to NG5 protein [Homo sapiens]          35   0.042
gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens]          35   0.042
gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens]          35   0.042
gi|100913209 heat shock transcription factor 4 isoform b [Homo s...    31   0.60 
gi|150010589 interferon induced transmembrane protein 1 (9-27) [...    30   1.0  
gi|148612842 interferon-induced transmembrane protein 3 (1-8U) [...    30   1.3  
gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain...    30   1.3  
gi|151101191 interferon induced transmembrane protein 2 (1-8D) [...    30   1.3  
gi|239754046 PREDICTED: similar to hCG1654959 [Homo sapiens]           29   1.8  
gi|239748575 PREDICTED: similar to hCG1654959 [Homo sapiens]           29   1.8  
gi|239742592 PREDICTED: similar to hCG1654959 [Homo sapiens]           29   1.8  
gi|20149563 stomatin (EPB72)-like 1 [Homo sapiens]                     29   1.8  
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    29   2.3  
gi|22027651 adaptor-related protein complex 1 beta 1 subunit iso...    28   3.0  
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]    28   3.9  
gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]    28   3.9  
gi|222136575 interleukin 10 receptor, alpha precursor [Homo sapi...    28   5.1  
gi|21536468 AXL receptor tyrosine kinase isoform 2 [Homo sapiens]      28   5.1  

>gi|154707844 transmembrane protein 91 isoform a [Homo sapiens]
          Length = 172

 Score =  352 bits (904), Expect = 7e-98
 Identities = 172/172 (100%), Positives = 172/172 (100%)

Query: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
           MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60

Query: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
           LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120

Query: 121 TNKAWAKGDIQGAGAASRRAFLLGVLAVGLGVCTYAAALVTLAAYLASRDPP 172
           TNKAWAKGDIQGAGAASRRAFLLGVLAVGLGVCTYAAALVTLAAYLASRDPP
Sbjct: 121 TNKAWAKGDIQGAGAASRRAFLLGVLAVGLGVCTYAAALVTLAAYLASRDPP 172


>gi|149588708 transmembrane protein 91 isoform c [Homo sapiens]
          Length = 133

 Score =  254 bits (648), Expect = 3e-68
 Identities = 121/121 (100%), Positives = 121/121 (100%)

Query: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
           MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60

Query: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
           LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120

Query: 121 T 121
           T
Sbjct: 121 T 121


>gi|149588687 transmembrane protein 91 isoform c [Homo sapiens]
          Length = 133

 Score =  254 bits (648), Expect = 3e-68
 Identities = 121/121 (100%), Positives = 121/121 (100%)

Query: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
           MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60

Query: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
           LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120

Query: 121 T 121
           T
Sbjct: 121 T 121


>gi|110578660 transmembrane protein 91 isoform b [Homo sapiens]
          Length = 139

 Score =  252 bits (643), Expect = 1e-67
 Identities = 120/120 (100%), Positives = 120/120 (100%)

Query: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
           MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60

Query: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
           LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120


>gi|149588874 transmembrane protein 91 isoform d [Homo sapiens]
          Length = 127

 Score =  252 bits (643), Expect = 1e-67
 Identities = 120/120 (100%), Positives = 120/120 (100%)

Query: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
           MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60

Query: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
           LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120


>gi|149588540 transmembrane protein 91 isoform e [Homo sapiens]
          Length = 123

 Score =  252 bits (643), Expect = 1e-67
 Identities = 120/120 (100%), Positives = 120/120 (100%)

Query: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
           MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60

Query: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
           LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120


>gi|13376347 hypothetical protein LOC79953 [Homo sapiens]
          Length = 258

 Score =  100 bits (249), Expect = 6e-22
 Identities = 49/96 (51%), Positives = 61/96 (63%)

Query: 75  SDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQKTNKAWAKGDIQGAG 134
           SD  SD +         P DHLGL+VFSMLCCFWP+GIAAF L+ +TNKA AKGD+  A 
Sbjct: 161 SDYSSDTESEDNFLMMPPRDHLGLSVFSMLCCFWPLGIAAFYLSHETNKAVAKGDLHQAS 220

Query: 135 AASRRAFLLGVLAVGLGVCTYAAALVTLAAYLASRD 170
            +SRRA  L VL++ +G   Y    V L AYL+  +
Sbjct: 221 TSSRRALFLAVLSITIGTGVYVGVAVALIAYLSKNN 256


>gi|157743286 transmembrane protein 90A [Homo sapiens]
          Length = 238

 Score = 98.2 bits (243), Expect = 3e-21
 Identities = 52/117 (44%), Positives = 69/117 (58%), Gaps = 3/117 (2%)

Query: 54  LPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFL---PHDHLGLAVFSMLCCFWPV 110
           + +VS G+ E      +D    +SD+          FL   P DHLGL +FSMLCCFWP+
Sbjct: 117 IQTVSYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPL 176

Query: 111 GIAAFCLAQKTNKAWAKGDIQGAGAASRRAFLLGVLAVGLGVCTYAAALVTLAAYLA 167
           GIAAF  +Q T+KA +KGD + A   SRRA  L  LA+ +G   Y A +V LAAY++
Sbjct: 177 GIAAFYFSQGTSKAISKGDFRLASTTSRRALFLATLAIAVGAGLYVAVVVALAAYMS 233


>gi|77681565 NG5 protein [Homo sapiens]
          Length = 306

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 5/78 (6%)

Query: 92  PHDHLGLAVFSMLCCFWPVGIAAFCLAQKTNKAWAKGDIQGAGAASRRA--FLLGVLAVG 149
           PHD++ +AV + +CCFWP GI A   A +   A A+GD+  A  ASR A  F    LAVG
Sbjct: 220 PHDYMPIAVLTTICCFWPTGIIAIFKAVQVRTALARGDMVSAEIASREARNFSFISLAVG 279

Query: 150 LG---VCTYAAALVTLAA 164
           +    +CT    ++ +AA
Sbjct: 280 IAAMVLCTILTVVIIIAA 297


>gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]
          Length = 340

 Score = 50.8 bits (120), Expect = 6e-07
 Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 3/105 (2%)

Query: 62  GEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQKT 121
           G PR       SS  +    +GG       P D++ LA+ S  C  WPV I AF  A  +
Sbjct: 237 GSPRGSLSRHPSSQLAGPGVEGGEGTQK--PRDYIILAILSCFCPMWPVNIVAFAYAVMS 294

Query: 122 NKAWAKGDIQGAGAASRRAFLLGVLA-VGLGVCTYAAALVTLAAY 165
             +  +GD+ GA    R A LL ++A VG  +   A+ ++ L  Y
Sbjct: 295 RNSLQQGDVDGAQRLGRVAKLLSIVALVGGVLIIIASCVINLGVY 339


>gi|110578657 LOST1 [Homo sapiens]
          Length = 177

 Score = 40.4 bits (93), Expect = 8e-04
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 1/108 (0%)

Query: 53  PLPSVSAG-LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVG 111
           P  ++S G L  P P      SS  + S            P D+L LAV +  C  WP+ 
Sbjct: 61  PFKAISEGHLEAPLPRSPSRASSRRASSIATTSYAQDQEAPRDYLILAVVACFCPVWPLN 120

Query: 112 IAAFCLAQKTNKAWAKGDIQGAGAASRRAFLLGVLAVGLGVCTYAAAL 159
           +    ++  +  +  +G++ GA    R A LL +  + +G+     A+
Sbjct: 121 LIPLIISIMSRSSMQQGNVDGARRLGRLARLLSITLIIMGIVIIMVAV 168


>gi|211904185 hypothetical protein LOC387890 [Homo sapiens]
          Length = 109

 Score = 35.4 bits (80), Expect = 0.024
 Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 64  PRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQKTNK 123
           P P     + SS   +  D  +     +P ++L L + S  C  +P+ I A   +  +  
Sbjct: 6   PSPDFKRALDSSPEANTEDDKTEEDVPMPKNYLWLTIVSCFCPAYPINIVALVFSIMSLN 65

Query: 124 AWAKGDIQGAGAASRRA-------FLLGVLAVGLGVCTY 155
           ++  GD +GA    R A        ++G+L +G+    +
Sbjct: 66  SYNDGDYEGARRLGRNAKWVAIASIIIGLLIIGISCAVH 104


>gi|169178462 PREDICTED: similar to NG5 protein [Homo sapiens]
          Length = 93

 Score = 34.7 bits (78), Expect = 0.042
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)

Query: 91  LPHDHLGLAVFSMLCCFWPVGIAAFCLAQKTNKAWAKGDIQGAGAASR--RAFLLGVLAV 148
           LP D++  +V   L C    G+ A   + +   A  +GD+  A  ASR  R+ +L  L  
Sbjct: 15  LPKDYMMESVLVTLFCCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKARSLVLFSLLF 74

Query: 149 GLGVCTYAAALVTLAAYL 166
           G+ V T     V +A YL
Sbjct: 75  GVFVSTSWVIYVVVALYL 92


>gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens]
          Length = 288

 Score = 34.7 bits (78), Expect = 0.042
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)

Query: 91  LPHDHLGLAVFSMLCCFWPVGIAAFCLAQKTNKAWAKGDIQGAGAASR--RAFLLGVLAV 148
           LP D++  +V   L C    G+ A   + +   A  +GD+  A  ASR  R+ +L  L  
Sbjct: 210 LPKDYMMESVLVTLFCCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKARSLVLFSLLF 269

Query: 149 GLGVCTYAAALVTLAAYL 166
           G+ V T     V +A YL
Sbjct: 270 GVFVSTSWVIYVVVALYL 287



 Score = 26.9 bits (58), Expect = 8.7
 Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 51 SPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHD 94
          +PP        GEP PP    M    S SD  GG   SP  P D
Sbjct: 28 TPPQTLKHLPSGEPGPPFPAGMPGGGSGSDTKGGG--SPATPED 69


>gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens]
          Length = 288

 Score = 34.7 bits (78), Expect = 0.042
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)

Query: 91  LPHDHLGLAVFSMLCCFWPVGIAAFCLAQKTNKAWAKGDIQGAGAASR--RAFLLGVLAV 148
           LP D++  +V   L C    G+ A   + +   A  +GD+  A  ASR  R+ +L  L  
Sbjct: 210 LPKDYMMESVLVTLFCCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKARSLVLFSLLF 269

Query: 149 GLGVCTYAAALVTLAAYL 166
           G+ V T     V +A YL
Sbjct: 270 GVFVSTSWVIYVVVALYL 287



 Score = 26.9 bits (58), Expect = 8.7
 Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 51 SPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHD 94
          +PP        GEP PP    M    S SD  GG   SP  P D
Sbjct: 28 TPPQTLKHLPSGEPGPPFPAGMPGGGSGSDTKGGG--SPATPED 69


>gi|100913209 heat shock transcription factor 4 isoform b [Homo
           sapiens]
          Length = 492

 Score = 30.8 bits (68), Expect = 0.60
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 14/85 (16%)

Query: 7   RELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLG--EP 64
           R+L   L EG+ C TPA+       G+ L++  F +S         PLP  + GL     
Sbjct: 207 RKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYFIQS---------PLPETNLGLSPHRA 257

Query: 65  RPPDVEDMSSSDSDSDWDGGSRLSP 89
           R P + D+     DS    G+RLSP
Sbjct: 258 RGPIISDI---PEDSPSPEGTRLSP 279


>gi|150010589 interferon induced transmembrane protein 1 (9-27)
           [Homo sapiens]
          Length = 125

 Score = 30.0 bits (66), Expect = 1.0
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 94  DHLGLAVFSMLCCFWP-VGIAAFCLAQKTNKAWAKGDIQGAGAASRRAFLLGVLAVGLGV 152
           DH+  ++F+ L   W  +G  AF  + K+      GD+ GA A +  A  L + A+ LG+
Sbjct: 35  DHVVWSLFNTLFLNWCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI 94


>gi|148612842 interferon-induced transmembrane protein 3 (1-8U)
           [Homo sapiens]
          Length = 133

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)

Query: 94  DHLGLAVFSML----CCFWPVGIAAFCLAQKTNKAWAKGDIQGAGAASRRAFLLGVLAVG 149
           DH+  ++F+ L    CC   +G  AF  + K+      GD+ GA A +  A  L + A+ 
Sbjct: 56  DHVVWSLFNTLFMNPCC---LGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALI 112

Query: 150 LGV 152
           LG+
Sbjct: 113 LGI 115


>gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain and
            proline-rich containing [Homo sapiens]
          Length = 1435

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 9/60 (15%)

Query: 18   ECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLG-EPRPPDVEDMSSSD 76
            + + PA++P R +    L+        R  +  +PP PS+ +GLG EP PP   + SS +
Sbjct: 1367 QLQAPAERPLRLQRSPVLK--------RRPKLEAPPSPSLGSGLGTEPLPPQPTEPSSPE 1418


>gi|151101191 interferon induced transmembrane protein 2 (1-8D)
           [Homo sapiens]
          Length = 132

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)

Query: 94  DHLGLAVFSML----CCFWPVGIAAFCLAQKTNKAWAKGDIQGAGAASRRAFLLGVLAVG 149
           DH+  ++F+ L    CC   +G  AF  + K+      GD+ GA A +  A  L + A+ 
Sbjct: 55  DHVVWSLFNTLFMNTCC---LGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALI 111

Query: 150 LGV 152
           LG+
Sbjct: 112 LGI 114


>gi|239754046 PREDICTED: similar to hCG1654959 [Homo sapiens]
          Length = 104

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 24  QKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDG 83
           QKP  H    P   + F         L      +S GLG    P      +SD    W  
Sbjct: 38  QKPAPHSQSHPKNALEFG-------VLKKREEGLSKGLGTKLDPTSASAHASDGAHRWRA 90

Query: 84  GSRLSPFLPHDHLG 97
                P+ P  HLG
Sbjct: 91  ACPSFPWCPQTHLG 104


>gi|239748575 PREDICTED: similar to hCG1654959 [Homo sapiens]
          Length = 104

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 24  QKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDG 83
           QKP  H    P   + F         L      +S GLG    P      +SD    W  
Sbjct: 38  QKPAPHSQSHPKNALEFG-------VLKKREEGLSKGLGTKLDPTSASAHASDGAHRWRA 90

Query: 84  GSRLSPFLPHDHLG 97
                P+ P  HLG
Sbjct: 91  ACPSFPWCPQTHLG 104


>gi|239742592 PREDICTED: similar to hCG1654959 [Homo sapiens]
          Length = 104

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 24  QKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDG 83
           QKP  H    P   + F         L      +S GLG    P      +SD    W  
Sbjct: 38  QKPAPHSQSHPKNALEFG-------VLKKREEGLSKGLGTKLDPTSASAHASDGAHRWRA 90

Query: 84  GSRLSPFLPHDHLG 97
                P+ P  HLG
Sbjct: 91  ACPSFPWCPQTHLG 104


>gi|20149563 stomatin (EPB72)-like 1 [Homo sapiens]
          Length = 398

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 7/73 (9%)

Query: 20  ETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDS 79
           + P   P    L S L+++A       L FL   + S++ G   P P D  +M S     
Sbjct: 224 QPPQDSPAGPNLDSTLQQLA-------LHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPP 276

Query: 80  DWDGGSRLSPFLP 92
               G+R SP  P
Sbjct: 277 APQVGARSSPKQP 289


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 10/77 (12%)

Query: 22   PAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLG-----EPRPPDVEDMSSSD 76
            P   P R    SP    A  E+   L  L PP PSV    G     EP PP +E  +S +
Sbjct: 1519 PPPSPRRSVPPSPTSPRASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFE 1578

Query: 77   SDSDWDGGSRLSPFLPH 93
                    S L+P  PH
Sbjct: 1579 KPE-----SPLTPGPPH 1590


>gi|22027651 adaptor-related protein complex 1 beta 1 subunit
           isoform a [Homo sapiens]
          Length = 949

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 42  ESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSP 89
           E + G  F++PP  +V A LG P    + D+    S      GS ++P
Sbjct: 672 EGIGGTNFVAPPTAAVPANLGAPIGSGLSDLFDLTSGVGTLSGSYVAP 719


>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
          Length = 548

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 17  TECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVED 71
           TE ETP   P   E   PL   ++ +        +PP    S GLG+  PP  ED
Sbjct: 424 TESETPV--PAAAETADPLFYPSWYKGQTRKATTNPPCTPGSEGLGQIGPPGSED 476


>gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]
          Length = 540

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 17  TECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVED 71
           TE ETP   P   E   PL   ++ +        +PP    S GLG+  PP  ED
Sbjct: 424 TESETPV--PAAAETADPLFYPSWYKGQTRKATTNPPCTPGSEGLGQIGPPGSED 476


>gi|222136575 interleukin 10 receptor, alpha precursor [Homo
           sapiens]
          Length = 578

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 48  QFLSP-PLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGG 84
           QFL P P P     LG   PP + D  SS S +  D G
Sbjct: 334 QFLLPDPHPQADRTLGNREPPVLGDSCSSGSSNSTDSG 371


>gi|21536468 AXL receptor tyrosine kinase isoform 2 [Homo sapiens]
          Length = 885

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 11/73 (15%)

Query: 2   DSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGL 61
           D PS  EL++ L    +   PAQ+P          EI +     G  +  P  P  + G 
Sbjct: 783 DRPSFTELREDLENTLKALPPAQEPD---------EILYVNMDEGGGYPEP--PGAAGGA 831

Query: 62  GEPRPPDVEDMSS 74
             P  PD +D  S
Sbjct: 832 DPPTQPDPKDSCS 844


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,736,661
Number of Sequences: 37866
Number of extensions: 385899
Number of successful extensions: 1486
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1462
Number of HSP's gapped (non-prelim): 54
length of query: 172
length of database: 18,247,518
effective HSP length: 95
effective length of query: 77
effective length of database: 14,650,248
effective search space: 1128069096
effective search space used: 1128069096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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