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Search of human proteins with 153791276
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153791276 glycosyltransferase 8 domain containing 3 isoform
2 [Homo sapiens]
(409 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153791276 glycosyltransferase 8 domain containing 3 isoform 2... 848 0.0
gi|153791362 glycosyltransferase 8 domain containing 3 isoform 1... 832 0.0
gi|122937187 glycosyltransferase 8 domain containing 4 [Homo sap... 463 e-130
gi|116235482 glycosyltransferase-like 1B [Homo sapiens] 71 2e-12
gi|19924141 like-glycosyltransferase [Homo sapiens] 68 1e-11
gi|4758664 like-glycosyltransferase [Homo sapiens] 68 1e-11
gi|112181295 hypothetical protein LOC152002 [Homo sapiens] 51 2e-06
gi|223633890 hypothetical protein LOC729956 [Homo sapiens] 36 0.072
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 35 0.094
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 35 0.094
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 35 0.094
gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora... 35 0.16
gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2... 34 0.21
gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1... 34 0.21
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 33 0.47
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 33 0.47
gi|42740899 CTAGE family, member 5 isoform 3 [Homo sapiens] 32 0.80
gi|42740897 CTAGE family, member 5 isoform 1 [Homo sapiens] 32 0.80
gi|42740901 CTAGE family, member 5 isoform 4 [Homo sapiens] 32 0.80
gi|42740905 CTAGE family, member 5 isoform 2 [Homo sapiens] 32 0.80
gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 32 1.4
gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precurs... 32 1.4
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 31 1.8
gi|51479192 ring finger protein 1 [Homo sapiens] 31 1.8
gi|88758576 Shaw-related voltage-gated potassium channel protein... 31 1.8
gi|24497462 Shaw-related voltage-gated potassium channel protein... 31 1.8
gi|24497464 Shaw-related voltage-gated potassium channel protein... 31 1.8
gi|253795481 plexin B3 isoform 2 [Homo sapiens] 31 2.3
gi|29336063 plexin B3 isoform 1 [Homo sapiens] 31 2.3
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 31 2.3
>gi|153791276 glycosyltransferase 8 domain containing 3 isoform 2
[Homo sapiens]
Length = 409
Score = 848 bits (2191), Expect = 0.0
Identities = 409/409 (100%), Positives = 409/409 (100%)
Query: 1 MRRYLRVVVLCVACGFCSLLYAFSQLAVSLEEGTGGGGGKPQAAVASWLAGGGRGAVRGA 60
MRRYLRVVVLCVACGFCSLLYAFSQLAVSLEEGTGGGGGKPQAAVASWLAGGGRGAVRGA
Sbjct: 1 MRRYLRVVVLCVACGFCSLLYAFSQLAVSLEEGTGGGGGKPQAAVASWLAGGGRGAVRGA 60
Query: 61 GVAGPAAHPGVSDRYSLKIQPVEKMHLAVVACGERLEETMTMLKSAIIFSIKPLQFHIFA 120
GVAGPAAHPGVSDRYSLKIQPVEKMHLAVVACGERLEETMTMLKSAIIFSIKPLQFHIFA
Sbjct: 61 GVAGPAAHPGVSDRYSLKIQPVEKMHLAVVACGERLEETMTMLKSAIIFSIKPLQFHIFA 120
Query: 121 EDQLHHSFKGRLDNWSFLQTFNYTLYPITFPSENAAEWKKLFKPCASQRLFLPLILKEVD 180
EDQLHHSFKGRLDNWSFLQTFNYTLYPITFPSENAAEWKKLFKPCASQRLFLPLILKEVD
Sbjct: 121 EDQLHHSFKGRLDNWSFLQTFNYTLYPITFPSENAAEWKKLFKPCASQRLFLPLILKEVD 180
Query: 181 SLLYVDTDILFLRPVDDIWSLLKKFNSTQIAAMAPEHEEPRIGWYNRFARHPYYGKTGVN 240
SLLYVDTDILFLRPVDDIWSLLKKFNSTQIAAMAPEHEEPRIGWYNRFARHPYYGKTGVN
Sbjct: 181 SLLYVDTDILFLRPVDDIWSLLKKFNSTQIAAMAPEHEEPRIGWYNRFARHPYYGKTGVN 240
Query: 241 SGVMLMNMTRMRRKYFKNDMTTVRLQWGDILMPLLKKYKLNITWGDQDLLNIVFFHNPES 300
SGVMLMNMTRMRRKYFKNDMTTVRLQWGDILMPLLKKYKLNITWGDQDLLNIVFFHNPES
Sbjct: 241 SGVMLMNMTRMRRKYFKNDMTTVRLQWGDILMPLLKKYKLNITWGDQDLLNIVFFHNPES 300
Query: 301 LFVFPCQWNYRPDHCIYGSNCQEAEEGGIFILHGNRGVYHDDKQPAFRAVYEALRNCSFE 360
LFVFPCQWNYRPDHCIYGSNCQEAEEGGIFILHGNRGVYHDDKQPAFRAVYEALRNCSFE
Sbjct: 301 LFVFPCQWNYRPDHCIYGSNCQEAEEGGIFILHGNRGVYHDDKQPAFRAVYEALRNCSFE 360
Query: 361 DDNIRSLLKPLELELQKTVHTYCGKIYKIFIKQLAKSVRDRYARSPKEK 409
DDNIRSLLKPLELELQKTVHTYCGKIYKIFIKQLAKSVRDRYARSPKEK
Sbjct: 361 DDNIRSLLKPLELELQKTVHTYCGKIYKIFIKQLAKSVRDRYARSPKEK 409
>gi|153791362 glycosyltransferase 8 domain containing 3 isoform 1
[Homo sapiens]
Length = 440
Score = 832 bits (2149), Expect = 0.0
Identities = 409/440 (92%), Positives = 409/440 (92%), Gaps = 31/440 (7%)
Query: 1 MRRYLRVVVLCVACGFCSLLYAFSQLAVSLEEGTGGGGGKPQAAVASWLAGGGRGAVRGA 60
MRRYLRVVVLCVACGFCSLLYAFSQLAVSLEEGTGGGGGKPQAAVASWLAGGGRGAVRGA
Sbjct: 1 MRRYLRVVVLCVACGFCSLLYAFSQLAVSLEEGTGGGGGKPQAAVASWLAGGGRGAVRGA 60
Query: 61 GVAGPAAHPGVSDR-------------------------------YSLKIQPVEKMHLAV 89
GVAGPAAHPGVSDR YSLKIQPVEKMHLAV
Sbjct: 61 GVAGPAAHPGVSDRCKDFSLCYWNPYWMLPSDVCGMNCFWEAAFRYSLKIQPVEKMHLAV 120
Query: 90 VACGERLEETMTMLKSAIIFSIKPLQFHIFAEDQLHHSFKGRLDNWSFLQTFNYTLYPIT 149
VACGERLEETMTMLKSAIIFSIKPLQFHIFAEDQLHHSFKGRLDNWSFLQTFNYTLYPIT
Sbjct: 121 VACGERLEETMTMLKSAIIFSIKPLQFHIFAEDQLHHSFKGRLDNWSFLQTFNYTLYPIT 180
Query: 150 FPSENAAEWKKLFKPCASQRLFLPLILKEVDSLLYVDTDILFLRPVDDIWSLLKKFNSTQ 209
FPSENAAEWKKLFKPCASQRLFLPLILKEVDSLLYVDTDILFLRPVDDIWSLLKKFNSTQ
Sbjct: 181 FPSENAAEWKKLFKPCASQRLFLPLILKEVDSLLYVDTDILFLRPVDDIWSLLKKFNSTQ 240
Query: 210 IAAMAPEHEEPRIGWYNRFARHPYYGKTGVNSGVMLMNMTRMRRKYFKNDMTTVRLQWGD 269
IAAMAPEHEEPRIGWYNRFARHPYYGKTGVNSGVMLMNMTRMRRKYFKNDMTTVRLQWGD
Sbjct: 241 IAAMAPEHEEPRIGWYNRFARHPYYGKTGVNSGVMLMNMTRMRRKYFKNDMTTVRLQWGD 300
Query: 270 ILMPLLKKYKLNITWGDQDLLNIVFFHNPESLFVFPCQWNYRPDHCIYGSNCQEAEEGGI 329
ILMPLLKKYKLNITWGDQDLLNIVFFHNPESLFVFPCQWNYRPDHCIYGSNCQEAEEGGI
Sbjct: 301 ILMPLLKKYKLNITWGDQDLLNIVFFHNPESLFVFPCQWNYRPDHCIYGSNCQEAEEGGI 360
Query: 330 FILHGNRGVYHDDKQPAFRAVYEALRNCSFEDDNIRSLLKPLELELQKTVHTYCGKIYKI 389
FILHGNRGVYHDDKQPAFRAVYEALRNCSFEDDNIRSLLKPLELELQKTVHTYCGKIYKI
Sbjct: 361 FILHGNRGVYHDDKQPAFRAVYEALRNCSFEDDNIRSLLKPLELELQKTVHTYCGKIYKI 420
Query: 390 FIKQLAKSVRDRYARSPKEK 409
FIKQLAKSVRDRYARSPKEK
Sbjct: 421 FIKQLAKSVRDRYARSPKEK 440
>gi|122937187 glycosyltransferase 8 domain containing 4 [Homo
sapiens]
Length = 443
Score = 463 bits (1192), Expect = e-130
Identities = 218/355 (61%), Positives = 271/355 (76%), Gaps = 5/355 (1%)
Query: 52 GGRGAVRGAGVAGPAAHPGVSDRYSLKIQPVEKMHLAVVACGERLEETMTMLKSAIIFSI 111
G RGA R + A PG + + P +HLAVVACG RLEET+ MLKSA++FS
Sbjct: 80 GRRGAAR---LEKLARRPGEPRSFQAVLPPELWIHLAVVACGNRLEETLVMLKSAVLFSH 136
Query: 112 KPLQFHIFAEDQLHHSFKGRLDNW--SFLQTFNYTLYPITFPSENAAEWKKLFKPCASQR 169
+ +QFHIF ED L F +L W S+ + F + +YPITF N EWKKLFKPCA+QR
Sbjct: 137 RKIQFHIFTEDSLKPEFDKQLRQWPDSYTKKFEHRIYPITFSVGNPQEWKKLFKPCAAQR 196
Query: 170 LFLPLILKEVDSLLYVDTDILFLRPVDDIWSLLKKFNSTQIAAMAPEHEEPRIGWYNRFA 229
LFLP+ILK+VDSLLYVDTD+LFLRPVDDIW LL+ FNSTQ+AAMAPEHE P+IGWY+RFA
Sbjct: 197 LFLPVILKDVDSLLYVDTDVLFLRPVDDIWKLLRLFNSTQLAAMAPEHEIPKIGWYSRFA 256
Query: 230 RHPYYGKTGVNSGVMLMNMTRMRRKYFKNDMTTVRLQWGDILMPLLKKYKLNITWGDQDL 289
RHP+YG GVNSGVMLMN+TR+R FKN M L W D+L PL +KYK ITWGDQDL
Sbjct: 257 RHPFYGSAGVNSGVMLMNLTRIRSTQFKNSMIPTGLAWEDMLYPLYQKYKNAITWGDQDL 316
Query: 290 LNIVFFHNPESLFVFPCQWNYRPDHCIYGSNCQEAEEGGIFILHGNRGVYHDDKQPAFRA 349
LNI+F+ NPE L+VFPCQWNYRPDHC+YGSNC+EAE G+ +LHGNRGVYHDDKQP FRA
Sbjct: 317 LNIIFYFNPECLYVFPCQWNYRPDHCMYGSNCREAEHEGVSVLHGNRGVYHDDKQPTFRA 376
Query: 350 VYEALRNCSFEDDNIRSLLKPLELELQKTVHTYCGKIYKIFIKQLAKSVRDRYAR 404
+YEA+R+ F+D+ +S+ PL+L+ +TVHT CG+I ++F+KQ+ K+++ Y +
Sbjct: 377 LYEAIRDFPFQDNLFQSMYYPLQLKFLETVHTLCGRIPQVFLKQIEKTMKRAYEK 431
>gi|116235482 glycosyltransferase-like 1B [Homo sapiens]
Length = 721
Score = 71.2 bits (173), Expect = 2e-12
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 46/301 (15%)
Query: 58 RGAGVAG-PAAHPGVSDRYSLKIQP-----VEKMHLAVVACGERLE-ETMTMLKSAIIFS 110
R A + G P A PG +R QP E +H+A+V G + +T++KS + +
Sbjct: 64 RAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSMLFYR 123
Query: 111 IKPLQFHIFAEDQLHHSFKGRLDNW-------SFLQTFNYTLYPITFPSENAAEWKKLFK 163
PL H+ + + + W SF P+++ + L K
Sbjct: 124 KNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYGLMK 183
Query: 164 PCASQRLFLPLILK-EVDSLLYVDTDILFLRPVDDIWSLLKKFNSTQIAAMAPEHEEPRI 222
L LP L E+ ++ +DTD+ F + ++W+L F+ TQ + E +
Sbjct: 184 ------LVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLV----ENQS 233
Query: 223 GWY--NRFARH---PYYGKTGVNSGVMLMNMTRMRRKYFKNDMTTVRLQWGDILMPLLKK 277
WY N + H P G+ G N+GV+L+ + R+R + W + ++
Sbjct: 234 DWYLGNLWKNHRPWPALGR-GFNTGVILLRLDRLR-----------QAGWEQMWRLTARR 281
Query: 278 YKLNI---TWGDQDLLNIVFFHNPESLFVFPCQWNYRPDHCIYGSNCQEAEEGGIFILHG 334
L++ + DQD+ N V +P + PC WN + C +E + ++H
Sbjct: 282 ELLSLPATSLADQDIFNAVIKEHPGLVQRLPCVWNVQLSDHTLAERCY-SEASDLKVIHW 340
Query: 335 N 335
N
Sbjct: 341 N 341
>gi|19924141 like-glycosyltransferase [Homo sapiens]
Length = 756
Score = 68.2 bits (165), Expect = 1e-11
Identities = 72/300 (24%), Positives = 123/300 (41%), Gaps = 53/300 (17%)
Query: 29 SLEEGTGGGGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHPGVSDRYSLKIQPVEKMHLA 88
S+EEGTG +R VAG ++ G ++ E +H+A
Sbjct: 103 SMEEGTGDSEN-----------------LRAGIVAGNSSECGQQP----VVEKCETIHVA 141
Query: 89 VVACGERLE-ETMTMLKSAIIFSIKPLQFHIFAEDQLHHSFKGRLDNW-------SFLQT 140
+V G + +T++KS + PL FH+ A+ W F
Sbjct: 142 IVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQILATLFQTWMVPAVRVDFYNA 201
Query: 141 FNYTLYPITFPSENAAEWKKLFKPCASQRLFLPLILKEVDSLLYVDTDILFLRPVDDIWS 200
P+++ + L K ++ L P L+ V + +DTDI F + ++W+
Sbjct: 202 DELKSEVSWIPNKHYSGIYGLMKLVLTKTL--PANLERV---IVLDTDITFATDIAELWA 256
Query: 201 LLKKFNSTQIAAMAPEHEEPRIGWY--NRFARH---PYYGKTGVNSGVMLMNMTRMRRKY 255
+ KF Q+ + + WY N + H P G+ G N+GV+L+ + ++R+
Sbjct: 257 VFHKFKGQQVLGLVENQSD----WYLGNLWKNHRPWPALGR-GYNTGVILLLLDKLRKMK 311
Query: 256 FKNDMTTVRLQWGDILMPLLKKYKLNITWGDQDLLNIVFFHNPESLFVFPCQWNYR-PDH 314
++ RL LM +L + + DQD+ N V NP ++ PC WN + DH
Sbjct: 312 WEQMW---RLTAERELMGML-----STSLADQDIFNAVIKQNPFLVYQLPCFWNVQLSDH 363
>gi|4758664 like-glycosyltransferase [Homo sapiens]
Length = 756
Score = 68.2 bits (165), Expect = 1e-11
Identities = 72/300 (24%), Positives = 123/300 (41%), Gaps = 53/300 (17%)
Query: 29 SLEEGTGGGGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHPGVSDRYSLKIQPVEKMHLA 88
S+EEGTG +R VAG ++ G ++ E +H+A
Sbjct: 103 SMEEGTGDSEN-----------------LRAGIVAGNSSECGQQP----VVEKCETIHVA 141
Query: 89 VVACGERLE-ETMTMLKSAIIFSIKPLQFHIFAEDQLHHSFKGRLDNW-------SFLQT 140
+V G + +T++KS + PL FH+ A+ W F
Sbjct: 142 IVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQILATLFQTWMVPAVRVDFYNA 201
Query: 141 FNYTLYPITFPSENAAEWKKLFKPCASQRLFLPLILKEVDSLLYVDTDILFLRPVDDIWS 200
P+++ + L K ++ L P L+ V + +DTDI F + ++W+
Sbjct: 202 DELKSEVSWIPNKHYSGIYGLMKLVLTKTL--PANLERV---IVLDTDITFATDIAELWA 256
Query: 201 LLKKFNSTQIAAMAPEHEEPRIGWY--NRFARH---PYYGKTGVNSGVMLMNMTRMRRKY 255
+ KF Q+ + + WY N + H P G+ G N+GV+L+ + ++R+
Sbjct: 257 VFHKFKGQQVLGLVENQSD----WYLGNLWKNHRPWPALGR-GYNTGVILLLLDKLRKMK 311
Query: 256 FKNDMTTVRLQWGDILMPLLKKYKLNITWGDQDLLNIVFFHNPESLFVFPCQWNYR-PDH 314
++ RL LM +L + + DQD+ N V NP ++ PC WN + DH
Sbjct: 312 WEQMW---RLTAERELMGML-----STSLADQDIFNAVIKQNPFLVYQLPCFWNVQLSDH 363
>gi|112181295 hypothetical protein LOC152002 [Homo sapiens]
Length = 393
Score = 51.2 bits (121), Expect = 2e-06
Identities = 50/180 (27%), Positives = 73/180 (40%), Gaps = 32/180 (17%)
Query: 177 KEVDSLLYVDTDILFLRPVDDIWSLLKKFNSTQIAAMAPE-------------HEEPRIG 223
KE+ ++ +D D+ F + +++ F I +A E HE P+
Sbjct: 217 KEILQIIQLDLDLKFKTNIRELFEEFDSFLPGAIIGIAREMQPVYRHTFWQFRHENPQ-- 274
Query: 224 WYNRFARHPYYGKTGVNSGVMLMNMTRMRRKYFKNDMTTVRLQWGDILMPLLKKYKLNIT 283
R P G G NSGVML+N+ MR+ + RL + L KY
Sbjct: 275 --TRVGGPPPEGLPGFNSGVMLLNLEAMRQSPLYS-----RLLEPAQVQQLADKYHFRGH 327
Query: 284 WGDQDLLNIVFFHNPESLFVFPCQWN-----YRPDHCIYGSNCQEAE---EGGIFILHGN 335
GDQD ++ +P+ V C WN + DH S+ EA EG + I HGN
Sbjct: 328 LGDQDFFTMIGMEHPKLFHVLDCTWNRQLCTWWRDHGY--SDVFEAYFRCEGHVKIYHGN 385
>gi|223633890 hypothetical protein LOC729956 [Homo sapiens]
Length = 538
Score = 35.8 bits (81), Expect = 0.072
Identities = 16/33 (48%), Positives = 16/33 (48%)
Query: 33 GTGGGGGKPQAAVASWLAGGGRGAVRGAGVAGP 65
G GG GG P A WL GG G G G GP
Sbjct: 149 GAGGAGGGPGPGQAGWLEGGRTGGAGGRGGEGP 181
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 35.4 bits (80), Expect = 0.094
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 18 SLLYAFSQLAVSLEEGTGG--GGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHP 69
SL A + L+V+ G G GGG VA G G GA GAG GP ++P
Sbjct: 328 SLSAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKGPRSYP 381
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 35.4 bits (80), Expect = 0.094
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 18 SLLYAFSQLAVSLEEGTGG--GGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHP 69
SL A + L+V+ G G GGG VA G G GA GAG GP ++P
Sbjct: 328 SLSAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKGPRSYP 381
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 35.4 bits (80), Expect = 0.094
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 18 SLLYAFSQLAVSLEEGTGG--GGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHP 69
SL A + L+V+ G G GGG VA G G GA GAG GP ++P
Sbjct: 328 SLSAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGAGAGAGAKGPRSYP 381
>gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 6 [Homo sapiens]
Length = 1093
Score = 34.7 bits (78), Expect = 0.16
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 12/48 (25%)
Query: 14 CGFCSLLYAFSQLAVSLEEGTGGGGGKPQAAVASWLAGGGRGAVRGAG 61
CG+C Y FS++ S GGGGG AGGG G++ G G
Sbjct: 174 CGYCK--YHFSKMKTSRHSSGGGGGG----------AGGGGGSMGGGG 209
>gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2
[Homo sapiens]
Length = 994
Score = 34.3 bits (77), Expect = 0.21
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 35 GGGGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHPG----------VSDRYSLKIQPVEK 84
GG GG P GG G G G G HPG + + K + E+
Sbjct: 20 GGYGGGPAGGHGGNRGSGGGGGGGGGGRGGRGRHPGHLKGREIGMWYAKKQGQKNKEAER 79
Query: 85 MHLAVVACGERLEETMTMLKSAI 107
AVV ER EE + L +++
Sbjct: 80 QERAVVHMDERREEQIVQLLNSV 102
>gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1
[Homo sapiens]
Length = 1008
Score = 34.3 bits (77), Expect = 0.21
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 35 GGGGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHPG----------VSDRYSLKIQPVEK 84
GG GG P GG G G G G HPG + + K + E+
Sbjct: 20 GGYGGGPAGGHGGNRGSGGGGGGGGGGRGGRGRHPGHLKGREIGMWYAKKQGQKNKEAER 79
Query: 85 MHLAVVACGERLEETMTMLKSAI 107
AVV ER EE + L +++
Sbjct: 80 QERAVVHMDERREEQIVQLLNSV 102
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 33.1 bits (74), Expect = 0.47
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 33 GTGGGGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHP 69
G GG GG A+ GGG G GA AG A HP
Sbjct: 212 GAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHP 248
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 33.1 bits (74), Expect = 0.47
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 33 GTGGGGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHP 69
G GG GG A+ GGG G GA AG A HP
Sbjct: 212 GAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHP 248
>gi|42740899 CTAGE family, member 5 isoform 3 [Homo sapiens]
Length = 761
Score = 32.3 bits (72), Expect = 0.80
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 339 YHDDKQPAFRAVYEALRNCSFEDDNIRSLLKPLELELQKTVHTYCGKI 386
Y +K+ V E + + + E + R K LE EL++T+H+Y G+I
Sbjct: 406 YRLEKEEKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQGQI 453
>gi|42740897 CTAGE family, member 5 isoform 1 [Homo sapiens]
Length = 804
Score = 32.3 bits (72), Expect = 0.80
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 339 YHDDKQPAFRAVYEALRNCSFEDDNIRSLLKPLELELQKTVHTYCGKI 386
Y +K+ V E + + + E + R K LE EL++T+H+Y G+I
Sbjct: 406 YRLEKEEKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQGQI 453
>gi|42740901 CTAGE family, member 5 isoform 4 [Homo sapiens]
Length = 775
Score = 32.3 bits (72), Expect = 0.80
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 339 YHDDKQPAFRAVYEALRNCSFEDDNIRSLLKPLELELQKTVHTYCGKI 386
Y +K+ V E + + + E + R K LE EL++T+H+Y G+I
Sbjct: 377 YRLEKEEKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQGQI 424
>gi|42740905 CTAGE family, member 5 isoform 2 [Homo sapiens]
Length = 792
Score = 32.3 bits (72), Expect = 0.80
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 339 YHDDKQPAFRAVYEALRNCSFEDDNIRSLLKPLELELQKTVHTYCGKI 386
Y +K+ V E + + + E + R K LE EL++T+H+Y G+I
Sbjct: 394 YRLEKEEKLSKVDEKISHATEELETYRKRAKDLEEELERTIHSYQGQI 441
>gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
A [Homo sapiens]
Length = 353
Score = 31.6 bits (70), Expect = 1.4
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Query: 33 GTGGGGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHPGVSDRY 75
G GGGGG QA A GG GA V G + P + D Y
Sbjct: 80 GAGGGGGSSQAGGAPGPPSGGPGA-----VGGTSGKPALEDLY 117
Score = 29.3 bits (64), Expect = 6.7
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 10/33 (30%)
Query: 33 GTGGGGGKPQAAVASWLAGGGRGAVRGAGVAGP 65
GTGGGGG AGGG G+ + G GP
Sbjct: 74 GTGGGGG----------AGGGGGSSQAGGAPGP 96
>gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precursor
[Homo sapiens]
Length = 864
Score = 31.6 bits (70), Expect = 1.4
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 25 QLAVSLEEGTGGGGGKPQA-AVASWLAGGGRGAVRGAGVAG 64
Q SL+EG GG G +A A W A GG G GA AG
Sbjct: 285 QAGRSLQEGAEGGQGCSEAWATLGWAAAGGFGGGGGACTAG 325
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 31.2 bits (69), Expect = 1.8
Identities = 20/64 (31%), Positives = 26/64 (40%)
Query: 32 EGTGGGGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHPGVSDRYSLKIQPVEKMHLAVVA 91
+G G GGG + AGGG G G G G G +R + Q V + A+
Sbjct: 155 DGPGAGGGAERGGSGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQAVRRRLSALRG 214
Query: 92 CGER 95
G R
Sbjct: 215 RGRR 218
>gi|51479192 ring finger protein 1 [Homo sapiens]
Length = 406
Score = 31.2 bits (69), Expect = 1.8
Identities = 16/38 (42%), Positives = 17/38 (44%)
Query: 33 GTGGGGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHPG 70
GTGGGG A G RG G G GP + PG
Sbjct: 214 GTGGGGTGGVGGGAGSEDSGDRGGTLGGGTLGPPSPPG 251
>gi|88758576 Shaw-related voltage-gated potassium channel protein 4
isoform c [Homo sapiens]
Length = 626
Score = 31.2 bits (69), Expect = 1.8
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 37 GGGKPQAAVASWLAGGGRGAVRGAGVAGPA----AHPGVSDRYSLKIQPVEKMHLAVVAC 92
GGG+P+ GGG G+ +G G HPGV Y L K+H C
Sbjct: 70 GGGRPETD------GGGVGSSGSSGGGGCEFFFDRHPGVF-AYVLNYYRTGKLHCPADVC 122
Query: 93 GERLEETMT 101
G EE +T
Sbjct: 123 GPLFEEELT 131
>gi|24497462 Shaw-related voltage-gated potassium channel protein 4
isoform a [Homo sapiens]
Length = 635
Score = 31.2 bits (69), Expect = 1.8
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 37 GGGKPQAAVASWLAGGGRGAVRGAGVAGPA----AHPGVSDRYSLKIQPVEKMHLAVVAC 92
GGG+P+ GGG G+ +G G HPGV Y L K+H C
Sbjct: 70 GGGRPETD------GGGVGSSGSSGGGGCEFFFDRHPGVF-AYVLNYYRTGKLHCPADVC 122
Query: 93 GERLEETMT 101
G EE +T
Sbjct: 123 GPLFEEELT 131
>gi|24497464 Shaw-related voltage-gated potassium channel protein 4
isoform b [Homo sapiens]
Length = 582
Score = 31.2 bits (69), Expect = 1.8
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 37 GGGKPQAAVASWLAGGGRGAVRGAGVAGPA----AHPGVSDRYSLKIQPVEKMHLAVVAC 92
GGG+P+ GGG G+ +G G HPGV Y L K+H C
Sbjct: 70 GGGRPETD------GGGVGSSGSSGGGGCEFFFDRHPGVF-AYVLNYYRTGKLHCPADVC 122
Query: 93 GERLEETMT 101
G EE +T
Sbjct: 123 GPLFEEELT 131
>gi|253795481 plexin B3 isoform 2 [Homo sapiens]
Length = 1932
Score = 30.8 bits (68), Expect = 2.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 303 VFPCQWNYRPDHCIYGSNCQEAE 325
++ C W + HC+YG +C E E
Sbjct: 663 IWRCHWCPQSSHCVYGEHCPEGE 685
>gi|29336063 plexin B3 isoform 1 [Homo sapiens]
Length = 1909
Score = 30.8 bits (68), Expect = 2.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 303 VFPCQWNYRPDHCIYGSNCQEAE 325
++ C W + HC+YG +C E E
Sbjct: 640 IWRCHWCPQSSHCVYGEHCPEGE 662
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 30.8 bits (68), Expect = 2.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 35 GGGGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHPG 70
GG GG +A +S+ GG G G G G A+ PG
Sbjct: 9 GGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPG 44
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.140 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,284,918
Number of Sequences: 37866
Number of extensions: 763498
Number of successful extensions: 4099
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 3916
Number of HSP's gapped (non-prelim): 162
length of query: 409
length of database: 18,247,518
effective HSP length: 105
effective length of query: 304
effective length of database: 14,271,588
effective search space: 4338562752
effective search space used: 4338562752
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.