Guide to the Human Genome
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Name: CYP11A1 Sequence: fasta or formatted (521aa) NCBI GI: 153218646
Description:

cytochrome P450, family 11, subfamily A, polypeptide 1 isoform a precursor

Referenced in:

Cytochrome P450 Enzymes
Steroid Hormones

Other entries for this name:
alt prot [363aa] cytochrome P450, family 11, subfamily A, polypeptide 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         32           2
 C cysteine            0.4          2           1
 D aspartate           5.0         26           2
 E glutamate           5.8         30           2
 F phenylalanine       6.0         31           3
 G glycine             6.0         31           2
 H histidine           2.9         15           2
 I isoleucine          5.2         27           1
 K lysine              5.0         26           2
 L leucine            10.9         57           2
 M methionine          3.1         16           1
 N asparagine          4.4         23           1
 P proline             5.8         30           2
 Q glutamine           4.4         23           2
 R arginine            6.7         35           2
 S serine              4.8         25           1
 T threonine           5.2         27           2
 V valine              6.9         36           2
 W tryptophan          2.1         11           1
 Y tyrosine            3.5         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 11, subfamily A, polypeptid... 
CYP11A1               0.682   cytochrome P450, family 11, subfamily A, polypeptid...
CYP11B2               0.307   cytochrome P450, family 11, subfamily B, polypeptid...
CYP11B1               0.294   cytochrome P450, family 11, subfamily B, polypeptide...
CYP11B1               0.224   cytochrome P450, family 11, subfamily B, polypeptide...
CYP27B1               0.203   cytochrome P450, family 27, subfamily B, polypeptide ...
CYP24A1               0.189   cytochrome P450 family 24 subfamily A polypeptide 1 ...
CYP27A1               0.172   cytochrome P450, family 27, subfamily A, polypeptide ...
CYP24A1               0.146   cytochrome P450 family 24 subfamily A polypeptide 1...
CYP27C1               0.139   cytochrome P450, family 27, subfamily C, polypeptid...
CYP3A4                0.072   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A5                0.072   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP3A43               0.068   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP4F8                0.065   cytochrome P450, family 4, subfamily F, polypeptide 8...
CYP3A7                0.064   cytochrome P450, family 3, subfamily A, polypeptide 7...
CYP3A43               0.064   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP4F12               0.063   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4F3                0.062   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4F2                0.061   cytochrome P450, family 4, subfamily F, polypeptide ...
CYP4F11               0.060   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4F11               0.060   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4V2                0.059   cytochrome P450, family 4, subfamily v, polypeptide...
CYP2J2                0.056   cytochrome P450, family 2, subfamily J, polypeptide ...
CYP4A11               0.051   cytochrome P450, family 4, subfamily A, polypeptide...
CYP1B1                0.050   cytochrome P450, family 1, subfamily B, polypeptide...
TBXAS1                0.049   thromboxane A synthase 1, platelet isoform TXS-I [H...
TBXAS1                0.049   thromboxane A synthase 1, platelet isoform TXS-I [H...
CYP4Z1                0.049   cytochrome P450 4Z1 
CYP4X1                0.048   cytochrome P450, family 4, subfamily X, polypeptide ...
CYP4F22               0.048   cytochrome P450, family 4, subfamily F, polypeptide...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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