Guide to the Human Genome
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Search of human proteins with 15055535

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|15055535 bactericidal/permeability-increasing protein-like 1
[Homo sapiens]
         (458 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|15055535 bactericidal/permeability-increasing protein-like 1 ...   877   0.0  
gi|32964823 antimicrobial peptide RYA3 [Homo sapiens]                 140   2e-33
gi|223278377 antimicrobial peptide RY2G5 [Homo sapiens]               137   2e-32
gi|28372551 bactericidal/permeability-increasing protein-like 2 ...   121   2e-27
gi|28372525 bactericidal/permeability-increasing protein-like 3 ...   109   5e-24
gi|157276599 bactericidal/permeability-increasing protein precur...   100   3e-21
gi|31652249 lipopolysaccharide-binding protein precursor [Homo s...    83   5e-16
gi|5453914 phospholipid transfer protein isoform a precursor [Ho...    45   2e-04
gi|33356541 phospholipid transfer protein isoform b precursor [H...    38   0.017
gi|156139141 FAD-dependent oxidoreductase domain containing 2 [H...    34   0.24 
gi|156139139 FAD-dependent oxidoreductase domain containing 2 [H...    34   0.24 
gi|7705925 dicarbonyl/L-xylulose reductase [Homo sapiens]              32   0.92 
gi|29570800 cadherin-like 26 isoform a [Homo sapiens]                  32   1.2  
gi|126116589 fibrocystin L [Homo sapiens]                              29   7.8  

>gi|15055535 bactericidal/permeability-increasing protein-like 1
           [Homo sapiens]
          Length = 458

 Score =  877 bits (2265), Expect = 0.0
 Identities = 458/458 (100%), Positives = 458/458 (100%)

Query: 1   MAWASRLGLLLALLLPVVGASTPGTVVRLNKAALSYVSEIGKAPLQRALQVTVPHFLDWS 60
           MAWASRLGLLLALLLPVVGASTPGTVVRLNKAALSYVSEIGKAPLQRALQVTVPHFLDWS
Sbjct: 1   MAWASRLGLLLALLLPVVGASTPGTVVRLNKAALSYVSEIGKAPLQRALQVTVPHFLDWS 60

Query: 61  GEALQPTRIRILNVHVPRLHLKFIAGFGVRLLAAANFTFKVFRAPEPLELTLPVELLADT 120
           GEALQPTRIRILNVHVPRLHLKFIAGFGVRLLAAANFTFKVFRAPEPLELTLPVELLADT
Sbjct: 61  GEALQPTRIRILNVHVPRLHLKFIAGFGVRLLAAANFTFKVFRAPEPLELTLPVELLADT 120

Query: 121 RVTQSSIRTPVVSISACSLFSGHANEFDGSNSTSHALLVLVQKHIKAVLSNKLCLSISNL 180
           RVTQSSIRTPVVSISACSLFSGHANEFDGSNSTSHALLVLVQKHIKAVLSNKLCLSISNL
Sbjct: 121 RVTQSSIRTPVVSISACSLFSGHANEFDGSNSTSHALLVLVQKHIKAVLSNKLCLSISNL 180

Query: 181 VQGVNVHLGTLIGLNPVGPESQIRYSMVSVPTVTSDYISLEVNAVLFLLGKPIILPTDAT 240
           VQGVNVHLGTLIGLNPVGPESQIRYSMVSVPTVTSDYISLEVNAVLFLLGKPIILPTDAT
Sbjct: 181 VQGVNVHLGTLIGLNPVGPESQIRYSMVSVPTVTSDYISLEVNAVLFLLGKPIILPTDAT 240

Query: 241 PFVLPRHVGTEGSMATVGLSQQLFDSALLLLQKAGALNLDITGQLRSDDNLLNTSALGRL 300
           PFVLPRHVGTEGSMATVGLSQQLFDSALLLLQKAGALNLDITGQLRSDDNLLNTSALGRL
Sbjct: 241 PFVLPRHVGTEGSMATVGLSQQLFDSALLLLQKAGALNLDITGQLRSDDNLLNTSALGRL 300

Query: 301 IPEVARQFPEPMPVVLKVRLGATPVAMLHTNNATLRLQPFVEVLATASNSAFQSLFSLDV 360
           IPEVARQFPEPMPVVLKVRLGATPVAMLHTNNATLRLQPFVEVLATASNSAFQSLFSLDV
Sbjct: 301 IPEVARQFPEPMPVVLKVRLGATPVAMLHTNNATLRLQPFVEVLATASNSAFQSLFSLDV 360

Query: 361 VVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSNVGFIDTDQVRTLMGTVFEKPLLDHLNA 420
           VVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSNVGFIDTDQVRTLMGTVFEKPLLDHLNA
Sbjct: 361 VVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSNVGFIDTDQVRTLMGTVFEKPLLDHLNA 420

Query: 421 LLAMGIALPGVVNLHYVAPEIFVYEGYVVISSGLFYQS 458
           LLAMGIALPGVVNLHYVAPEIFVYEGYVVISSGLFYQS
Sbjct: 421 LLAMGIALPGVVNLHYVAPEIFVYEGYVVISSGLFYQS 458


>gi|32964823 antimicrobial peptide RYA3 [Homo sapiens]
          Length = 476

 Score =  140 bits (353), Expect = 2e-33
 Identities = 110/388 (28%), Positives = 189/388 (48%), Gaps = 14/388 (3%)

Query: 69  IRILNVHVPRLHLKFIAGFGVRLLAAANFTFKVFRAPEPL----ELTLPVELLADTRVTQ 124
           ++I  + +P++ LK + GFGV+L   +  T        PL    +L   V + +   +  
Sbjct: 95  LKIEELTLPKVLLKLLPGFGVQL---SLHTKVGMHCSGPLGGLLQLAAEVNVTSRVALAV 151

Query: 125 SSIRTPVVSISACSLFSGHANEFDGSNSTSHALLVLVQKHIKAVLSNKLCLSISNLVQGV 184
           SS  TP++ +  CS   GH + F G   T   L  +V++ +  VL   LC  + +++  V
Sbjct: 152 SSRGTPILILKRCSTLLGHISLFSGLLPTP--LFGVVEQMLFKVLPGLLCPVVDSVLGVV 209

Query: 185 NVHLGTLIGLNPVGPESQIRYSMVSVPTVTSDYISLEVNAVLFLLGKPII-LPTDATPFV 243
           N  LG ++GL  +G    + +S+ ++P +++ YI L++N ++  +   II  P    P  
Sbjct: 210 NELLGAVLGLVSLGALGSVEFSLATLPLISNQYIELDINPIVKSVAGDIIDFPKSRAPAK 269

Query: 244 LPRHVGTEGSMATVGLSQQLFDSALLLLQKAGALNLDITGQLRSDDNLLNTSALGRLIPE 303
           +P     +   + V +   LF++   LLQ  GAL++DIT +L   D  L T+ L  L+PE
Sbjct: 270 VPPK---KDHTSQVMVPLYLFNTTFGLLQTNGALDMDITPELVPSDVPLTTTDLAALLPE 326

Query: 304 VARQFPEPMPVVLKVRLGATPVAMLHTNNATLRLQPFVEVLATASNSAFQSLFSLDVVVN 363
              + P    ++L +R+   P   LH   A + L   + VL        +SLF L+ V+ 
Sbjct: 327 ALGKLPLHQQLLLFLRVREAPTVTLHNKKALVSLPANIHVLFYVPKGTPESLFELNSVMT 386

Query: 364 LRLQLSVSKVKLQGTTSVLGDVQLTVASSNVGFIDTDQVRTLMGTVFEKPLLDHLNALLA 423
           +R QL+ S  KL  + S L  + + VASS     D  ++   +  V        LN  L 
Sbjct: 387 VRAQLAPSATKLHISLS-LERLSVKVASSFTHAFDGSRLEEWLSHVVGAVYAPKLNVALD 445

Query: 424 MGIALPGVVNLHYVAPEIFVYEGYVVIS 451
           +GI LP V+N+++    + + E  VV++
Sbjct: 446 VGIPLPKVLNINFSNSVLEIVENAVVLT 473


>gi|223278377 antimicrobial peptide RY2G5 [Homo sapiens]
          Length = 614

 Score =  137 bits (345), Expect = 2e-32
 Identities = 103/395 (26%), Positives = 186/395 (47%), Gaps = 14/395 (3%)

Query: 67  TRIRILNVHVPRLHLKFIAGFGVRLLAAANFTFKVFRAPEPLELTLPVELLADTRVTQSS 126
           T +RI+ + +PR+ ++ + G GV L                L++ + V + A  R+T   
Sbjct: 225 TGLRIVELTLPRVSVRLLPGVGVYLSLYTRVAINGKSLIGFLDIAVEVNITAKVRLTMDR 284

Query: 127 IRTPVVSISACSLFSGHANEFDGSNSTSHALLVLVQKHIKAVLSNKLCLSISNLVQGVNV 186
              P + I  C    G            + +  LV + +  VL + LC  +  ++  VN 
Sbjct: 285 TGYPRLVIERCDTLLGGIKVKLLRGLLPNLVDNLVNRVLADVLPDLLCPIVDVVLGLVND 344

Query: 187 HLGTLIGLNPVGPESQIRYSMVSVPTVTSDYISLEVNAVL---------FLLGKPIILPT 237
            LG +  L P+G    ++Y+  S+P VT +++ L++N ++         + LG P + P 
Sbjct: 345 QLGLVDSLIPLGILGSVQYTFSSLPLVTGEFLELDLNTLVGEAGGGLIDYPLGWPAVSPK 404

Query: 238 DATPFVLPRHVGTEGSMATVGLSQQLFDSALLLLQKAGALNLDITGQLRSDDNLLNTSAL 297
              P + P    T+  +A   +S     S L LLQK  AL+LDIT  +  +   L T+ L
Sbjct: 405 PM-PELPPMGDNTKSQLA---MSANFLGSVLTLLQKQHALDLDITNGMFEELPPLTTATL 460

Query: 298 GRLIPEVARQFPEPMPVVLKVRLGATPVAMLHTNNATLRLQPFVEVLATASNSAFQSLFS 357
           G LIP+V +Q+PE  P+++++++   P  ML  + A +++    EV+ +       ++  
Sbjct: 461 GALIPKVFQQYPESCPLIIRIQVLNPPSVMLQKDKALVKVLATAEVMVSQPKDLETTICL 520

Query: 358 LDVVVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSNVGFIDTDQVRTLMGTVFEKPLLDH 417
           +DV        S    KL    + L    L + +SNVG  D   +  L+  +F+   +  
Sbjct: 521 IDVDTEFLASFSTEGDKLM-IDAKLEKTSLNLRTSNVGNFDIGLMEVLVEKIFDLAFMPA 579

Query: 418 LNALLAMGIALPGVVNLHYVAPEIFVYEGYVVISS 452
           +NA+L  G+ LP ++N+ +   +I V E  +V+S+
Sbjct: 580 MNAVLGSGVPLPKILNIDFSNADIDVLEDLLVLSA 614


>gi|28372551 bactericidal/permeability-increasing protein-like 2
           [Homo sapiens]
          Length = 507

 Score =  121 bits (303), Expect = 2e-27
 Identities = 111/459 (24%), Positives = 205/459 (44%), Gaps = 29/459 (6%)

Query: 23  PGTVVRLNKAALSYVSEIGKAPLQRALQVTVPHFLDWSG-EALQPTRIRILNVHV----- 76
           PG   R+ + AL Y  + G   +++ L+       D SG E+L+  ++  +N +      
Sbjct: 28  PGIKARITQRALDYGVQAGMKMIEQMLKEK--KLPDLSGSESLEFLKVDYVNYNFSNIKI 85

Query: 77  -----PRLHLKFIAGFGVRLLA---AAN------FTFKVFRAPEPLELTLP-VELLADTR 121
                P   L F+ G G++ L     AN      F   +F+     +L L  V       
Sbjct: 86  SAFSFPNTSLAFVPGVGIKALTNHGTANISTDWGFESPLFQDTGGADLFLSGVYFTGIII 145

Query: 122 VTQSSIRTPVVSISACSLFSGHAN-EFDGSNSTSH-ALLVLVQKHIKAVLSNKLCLSISN 179
           +T++    P + +  C     HA+  F G  S  + +    ++K I   L+  LC  I++
Sbjct: 146 LTRNDFGHPTLKLQDCYAQLSHAHVSFSGELSVLYNSFAEPMEKPILKNLNEMLCPIIAS 205

Query: 180 LVQGVNVHLGTLIGLNPVGPESQIRYSMVSVPTVTSDYISLEVNAVLFLLGKPIILPTDA 239
            V+ +N +L TL  L  +   + + YS++S P +T +Y+ L +  V + L      P   
Sbjct: 206 EVKALNANLSTLEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPFSP 265

Query: 240 TPFVLPRHVGTEGSMATVGLSQQLFDSALLLLQKAGALNLDITGQLRSDDNLLNTSALGR 299
            PFVLP       SM  +G+++  F SA      AG  N+ ++ +  S+  + N+  LG 
Sbjct: 266 VPFVLPER---SNSMLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGN 322

Query: 300 LIPEVARQFPEPMPVVLKVRLGATPVAMLHTNNATLRLQPFVEVLATASNSAFQSLFSLD 359
           ++  +A  +    P ++++     P+  L   N TL +   + +L    NS  +++ S+D
Sbjct: 323 VLSRIAEIYILSQPFMVRIMATEPPIINLQPGNFTLDIPASIMMLTQPKNSTVETIVSMD 382

Query: 360 VVVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSNVGFIDTDQVRTLMGTVFEKPLLDHLN 419
            V +  + L +   +L  + S L   +L +  SN   I+  +   ++ ++    +L   N
Sbjct: 383 FVASTSVGLVILGQRLVCSLS-LNRFRLALPESNRSNIEVLRFENILSSILHFGVLPLAN 441

Query: 420 ALLAMGIALPGVVNLHYVAPEIFVYEGYVVISSGLFYQS 458
           A L  G  L       +V  +I V EG+++IS+ L Y++
Sbjct: 442 AKLQQGFPLSNPHKFLFVNSDIEVLEGFLLISTDLKYET 480


>gi|28372525 bactericidal/permeability-increasing protein-like 3
           [Homo sapiens]
          Length = 453

 Score =  109 bits (273), Expect = 5e-24
 Identities = 97/391 (24%), Positives = 177/391 (45%), Gaps = 14/391 (3%)

Query: 67  TRIRILNVHVPRLHLKFIAGFGVRLLAAANFTF--KVFRAPEPLELTLPVELLADTRVTQ 124
           T +++ +V +P + L F+ G G+    +   T   K F     +E+ + + + A  R+ +
Sbjct: 65  TNLKVKDVQLPVITLNFVPGVGIFQCVSTGMTVTGKSFMGGN-MEIIVALNITATNRLLR 123

Query: 125 SS-IRTPVVSISACSLFSGHANEFDGSNSTSHALLVLVQKHIKAVLSNKLCLSISNLVQG 183
                 PV     C +   +      SN     +   +   +  VL   +C +I  ++  
Sbjct: 124 DEETGLPVFKSEGCEVILVNVKTNLPSNMLPKMVNKFLDSTLHKVLPGLMCPAIDAVLVY 183

Query: 184 VNVHLGTLIGLNPVGPESQIRYSMVSVPTVTSDYISLEVNAVLFLL-GKPIILPTDATPF 242
           VN     L    PVG    ++Y ++S P  T+ YI L+ + V+    GK I L       
Sbjct: 184 VNRKWTNLSDPMPVGQMGTVKYVLMSAPATTASYIQLDFSPVVQQQKGKTIKLADAGEAL 243

Query: 243 VLPRHVGTEGSMATVGLSQQLFDSALLLLQKAGALNLDIT--GQLRSDDNLLNTSALGRL 300
             P   G     + + L      + L LLQK+  +N+  T  G+L        T  L R 
Sbjct: 244 TFPE--GYAKGSSQLLLPATFLSAELALLQKSFHVNIQDTMIGELPPQ----TTKTLARF 297

Query: 301 IPEVARQFPEPMPVVLKVRLGATPVAMLHTNNATLRLQPFVEVLATASNS-AFQSLFSLD 359
           IPEVA  +P+  P+  ++++   P   + T  + L L   +E+ A    S A  SLF L+
Sbjct: 298 IPEVAVAYPKSKPLTTQIKIKKPPKVTMKTGKSLLHLHSTLEMFAARWRSKAPMSLFLLE 357

Query: 360 VVVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSNVGFIDTDQVRTLMGTVFEKPLLDHLN 419
           V  NL++Q SV + +LQ  TS+   + L+  SS++G  +  ++   + +  E+  +  +N
Sbjct: 358 VHFNLKVQYSVHENQLQMATSLDRLLSLSRKSSSIGNFNERELTGFITSYLEEAYIPVVN 417

Query: 420 ALLAMGIALPGVVNLHYVAPEIFVYEGYVVI 450
            +L +G+ LP  + ++Y   E+ + E  +++
Sbjct: 418 DVLQVGLPLPDFLAMNYNLAELDIVENALML 448


>gi|157276599 bactericidal/permeability-increasing protein precursor
           [Homo sapiens]
          Length = 487

 Score =  100 bits (249), Expect = 3e-21
 Identities = 108/484 (22%), Positives = 209/484 (43%), Gaps = 40/484 (8%)

Query: 3   WASRLGLLLALLLPVVGASTPGTVVRLNKAALSYVSEIGKAPLQRAL-QVTVPHFLD--- 58
           WAS L +L+A+   V  A  PG VVR+++  L Y S+ G A LQ+ L ++ +P + D   
Sbjct: 15  WAS-LMVLVAIGTAVTAAVNPGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFK 73

Query: 59  --------WSGEALQPTRIRILNVH---VPRLHLKF-IAGFGVRLLAAANFTFKVFRAPE 106
                   +S  ++     ++ +     VP + LKF I+   +++        +  +   
Sbjct: 74  IKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSG 133

Query: 107 PLELTLP-VELLADTRV-TQSSIRTPVVSISACSLFSGHANEFDGSNSTSHA--LLVLVQ 162
             +L++  + + AD ++ +  +   P ++ S+C   S H N      S S    L+ L  
Sbjct: 134 NFDLSIEGMSISADLKLGSNPTSGKPTITCSSC---SSHINSVHVHISKSKVGWLIQLFH 190

Query: 163 KHIKAVLSNKL----CLSISNLVQG-VNVHLGTLIGLNPVGPESQIRYSMVSVPTVTSDY 217
           K I++ L NK+    C  ++N V   +  +  TL  +  +   + I Y +V+ P  T++ 
Sbjct: 191 KKIESALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAET 250

Query: 218 ISLEVNAVLFLLGKPIILPTDATPFVLP--RHVGTEGSMATVGLSQQLFDSALLLLQKAG 275
           + +++    +          +  PF  P          M  +GLS   F++A L+ Q+AG
Sbjct: 251 LDVQMKGEFYSENH-----HNPPPFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAG 305

Query: 276 ALNLDITGQL--RSDDNLLNTSALGRLIPEVARQFPEPMPVVLKVRLGATPVAMLHTNNA 333
            L + +   +  +     L T   G  +PEVA++FP  M + + V     P   +     
Sbjct: 306 VLKMTLRDDMIPKESKFRLTTKFFGTFLPEVAKKFPN-MKIQIHVSASTPPHLSVQPTGL 364

Query: 334 TLRLQPFVEVLATASNSAFQSLFSLDVVVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSN 393
           T      V+  A   NS+  SLF + +     +++S    +L G    L  + L +  SN
Sbjct: 365 TFYPAVDVQAFAVLPNSSLASLFLIGMHTTGSMEVSAESNRLVGELK-LDRLLLELKHSN 423

Query: 394 VGFIDTDQVRTLMGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEIFVYEGYVVISSG 453
           +G    + ++ +M  +    +L  +N  L  G  LP    +      +  ++ +++  + 
Sbjct: 424 IGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGAD 483

Query: 454 LFYQ 457
           + Y+
Sbjct: 484 VVYK 487


>gi|31652249 lipopolysaccharide-binding protein precursor [Homo
           sapiens]
          Length = 481

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 104/479 (21%), Positives = 196/479 (40%), Gaps = 42/479 (8%)

Query: 9   LLLALLL---PVVGASTPGTVVRLNKAALSYVSEIGKAPLQ-RALQVTVPHFLDWSGEAL 64
           +LLALLL   P    + PG V R+    L Y ++ G   LQ   L++T+P   D++G+  
Sbjct: 11  ILLALLLTSTPEALGANPGLVARITDKGLQYAAQEGLLALQSELLRITLP---DFTGDLR 67

Query: 65  QP------TRIRILNVH-----------VPRLHLKF-IAGFGVRLLAAANFTFKVFRAPE 106
            P           LN+H           VP   L   I+   +R+          F+   
Sbjct: 68  IPHVGRGRYEFHSLNIHSCELLHSALRPVPGQGLSLSISDSSIRVQGRWKVRKSFFKLQG 127

Query: 107 PLELTLP-VELLADTRVTQSSIRTPVVSISACSLFSGHANEFDGSNSTSHALLVL---VQ 162
             ++++  + +  +  +   S   P V+ S+CS       E D S      L +    ++
Sbjct: 128 SFDVSVKGISISVNLLLGSESSGRPTVTASSCSSDIADV-EVDMSGDLGWLLNLFHNQIE 186

Query: 163 KHIKAVLSNKLCLSISNLVQG-VNVHLGTLIGLNPVGPESQIRYSMVSVPTVTSDYISLE 221
              + VL +++C  I   V   +  +L TL     +   + I YS+V  P  T+  + + 
Sbjct: 187 SKFQKVLESRICEMIQKSVSSDLQPYLQTLPVTTEIDSFADIDYSLVEAPRATAQMLEVM 246

Query: 222 VNAVLFLLGKPIILPTDATPFVLPRHVGTEGSMATVGLSQQLFDSALLLLQKAGALNLDI 281
               +F       +   A    LP        M    +S  +F++A L+  + G LN  I
Sbjct: 247 FKGEIFHRNHRSPVTLLAAVMSLPEE---HNKMVYFAISDYVFNTASLVYHEEGYLNFSI 303

Query: 282 TGQLRSDDN--LLNTSALGRLIPEVARQFPEPMPVVLKVRLGATPVAMLHTNNATLRLQP 339
           T  +   D+   L T +    +P +AR +P  M + L+  + + P  +L+ +   L + P
Sbjct: 304 TDDMIPPDSNIRLTTKSFRPFVPRLARLYPN-MNLELQGSVPSAP--LLNFSPGNLSVDP 360

Query: 340 FVEV--LATASNSAFQSLFSLDVVVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSNVGFI 397
           ++E+       +S+ + +F L V  N+   L+ +  K+ G     G V++ +  S VG  
Sbjct: 361 YMEIDAFVLLPSSSKEPVFRLSVATNVSATLTFNTSKITGFLKP-GKVKVELKESKVGLF 419

Query: 398 DTDQVRTLMGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEIFVYEGYVVISSGLFY 456
           + + +  L+            N  LA G  LP +  +      + +++ ++ + + + Y
Sbjct: 420 NAELLEALLNYYILNTFYPKFNDKLAEGFPLPLLKRVQLYDLGLQIHKDFLFLGANVQY 478


>gi|5453914 phospholipid transfer protein isoform a precursor [Homo
           sapiens]
          Length = 493

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 95/478 (19%), Positives = 185/478 (38%), Gaps = 47/478 (9%)

Query: 8   GLLLALLLPVVGASTPGTVVRLNKAALSYVSEIGKAPLQRALQ-VTVPHFLDWSGEALQP 66
           G L   LL    A  PG  +R+   AL  V + G   L++ L+ +T+P      G     
Sbjct: 5   GALFLALLAGAHAEFPGCKIRVTSKALELVKQEGLRFLEQELETITIPDLRGKEGHFYYN 64

Query: 67  -TRIRILNVHVPRLHLKFI-----------AGFGVRLLAAANFTF-----KVFRAPEPLE 109
            + +++  + +    L F            A  G+R      + F      +  + E + 
Sbjct: 65  ISEVKVTELQLTSSELDFQPQQELMLQITNASLGLRFRRQLLYWFFYDGGYINASAEGVS 124

Query: 110 LTLPVELLADTRVTQSSIRTPVVSISACSLFSGHANEFDGSNSTSHALL-VLVQKHIKAV 168
           +   +EL  D      + R  V ++S  +  S     F G+    +  L   +   ++ +
Sbjct: 125 IRTGLELSRDP-----AGRMKVSNVSCQASVSRMHAAFGGTFKKVYDFLSTFITSGMRFL 179

Query: 169 LSNKLCLSISNLVQGVNVHLGTLIGLNPVGPESQ----IRYSMVSVPTVTSDYISLEVNA 224
           L+ ++C     L     V L +L+   PV         I YS++  P  ++  + ++   
Sbjct: 180 LNQQIC---PVLYHAGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPVASTSNLDMDFRG 236

Query: 225 VLF-LLGKPIILPTDATPFVLPRHVGTEGSMATVGLSQQLFDSALLLLQKAGALNLDITG 283
             F L  +   LP  A    L      E  M  V  S+  FDSA+    +AGAL L + G
Sbjct: 237 AFFPLTERNWSLPNRAVEPQLQE----EERMVYVAFSEFFFDSAMESYFRAGALQLLLVG 292

Query: 284 QL--RSDDNLLNTSALGRLI---PEVARQFPEPMPVVLKVRLGATPVAMLHTNNATLRLQ 338
                  D LL  +  G ++   P V        P+ L++R+ A P   +  +  T+ + 
Sbjct: 293 DKVPHDLDMLLRATYFGSIVLLSPAVI-----DSPLKLELRVLAPPRCTIKPSGTTISVT 347

Query: 339 PFVEVLATASNSAFQSLFSLDVVVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSNVGFID 398
             V +     +     L S+ +   L  ++++ + K   T   L   ++    S +  + 
Sbjct: 348 ASVTIALVPPDQPEVQLSSMTMDARLSAKMAL-RGKALRTQLDLRRFRIYSNHSALESLA 406

Query: 399 TDQVRTLMGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEIFVYEGYVVISSGLFY 456
              ++  + T+ +  ++  LN     G+ +P    +++V   +  + G++ I + L +
Sbjct: 407 LIPLQAPLKTMLQIGVMPMLNERTWRGVQIPLPEGINFVHEVVTNHAGFLTIGADLHF 464


>gi|33356541 phospholipid transfer protein isoform b precursor [Homo
           sapiens]
          Length = 441

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 62/310 (20%), Positives = 125/310 (40%), Gaps = 23/310 (7%)

Query: 157 LLVLVQKHIKAVLSNKLCLSISNLVQGVNVHLGTLIGLNPVGPESQ----IRYSMVSVPT 212
           L   +   ++ +L+ ++C     L     V L +L+   PV         I YS++  P 
Sbjct: 116 LSTFITSGMRFLLNQQIC---PVLYHAGTVLLNSLLDTVPVRSSVDELVGIDYSLMKDPV 172

Query: 213 VTSDYISLEVNAVLF-LLGKPIILPTDATPFVLPRHVGTEGSMATVGLSQQLFDSALLLL 271
            ++  + ++     F L  +   LP  A    L      E  M  V  S+  FDSA+   
Sbjct: 173 ASTSNLDMDFRGAFFPLTERNWSLPNRAVEPQLQE----EERMVYVAFSEFFFDSAMESY 228

Query: 272 QKAGALNLDITGQL--RSDDNLLNTSALGRLI---PEVARQFPEPMPVVLKVRLGATPVA 326
            +AGAL L + G       D LL  +  G ++   P V        P+ L++R+ A P  
Sbjct: 229 FRAGALQLLLVGDKVPHDLDMLLRATYFGSIVLLSPAVI-----DSPLKLELRVLAPPRC 283

Query: 327 MLHTNNATLRLQPFVEVLATASNSAFQSLFSLDVVVNLRLQLSVSKVKLQGTTSVLGDVQ 386
            +  +  T+ +   V +     +     L S+ +   L  ++++ + K   T   L   +
Sbjct: 284 TIKPSGTTISVTASVTIALVPPDQPEVQLSSMTMDARLSAKMAL-RGKALRTQLDLRRFR 342

Query: 387 LTVASSNVGFIDTDQVRTLMGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEIFVYEG 446
           +    S +  +    ++  + T+ +  ++  LN     G+ +P    +++V   +  + G
Sbjct: 343 IYSNHSALESLALIPLQAPLKTMLQIGVMPMLNERTWRGVQIPLPEGINFVHEVVTNHAG 402

Query: 447 YVVISSGLFY 456
           ++ I + L +
Sbjct: 403 FLTIGADLHF 412


>gi|156139141 FAD-dependent oxidoreductase domain containing 2 [Homo
           sapiens]
          Length = 684

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 5/68 (7%)

Query: 349 NSAFQSLFSLDVVVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSNVGFIDTDQVRTLMGT 408
           NSAF++  ++  V N    LS S+V+L   T  +GD++    + N G +DT Q+++L G 
Sbjct: 223 NSAFETAENILGVTNFIHMLSRSRVRLSWATHYVGDLR----AINNGLLDTYQLKSLDG- 277

Query: 409 VFEKPLLD 416
           + E  L D
Sbjct: 278 LLESDLTD 285


>gi|156139139 FAD-dependent oxidoreductase domain containing 2 [Homo
           sapiens]
          Length = 684

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 5/68 (7%)

Query: 349 NSAFQSLFSLDVVVNLRLQLSVSKVKLQGTTSVLGDVQLTVASSNVGFIDTDQVRTLMGT 408
           NSAF++  ++  V N    LS S+V+L   T  +GD++    + N G +DT Q+++L G 
Sbjct: 223 NSAFETAENILGVTNFIHMLSRSRVRLSWATHYVGDLR----AINNGLLDTYQLKSLDG- 277

Query: 409 VFEKPLLD 416
           + E  L D
Sbjct: 278 LLESDLTD 285


>gi|7705925 dicarbonyl/L-xylulose reductase [Homo sapiens]
          Length = 244

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 8/54 (14%)

Query: 324 PVAMLHTNNATLRLQPFVEVLATASNSAFQSLFSLDVVVNLRLQLSVSKVKLQG 377
           PV +L  N A   LQPF+EV   A + +F+        VNLR  + VS++  +G
Sbjct: 76  PVDLLVNNAAVALLQPFLEVTKEAFDRSFE--------VNLRAVIQVSQIVARG 121


>gi|29570800 cadherin-like 26 isoform a [Homo sapiens]
          Length = 832

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 4/46 (8%)

Query: 189 GTLIG-LNPVGPESQIRYSMVSVPTVTSDYISLEVNAVLFLLGKPI 233
           GTL+G  N + P+SQIRY +V  P   ++++S++ N+ + +  +PI
Sbjct: 412 GTLLGTFNAMDPDSQIRYELVHDP---ANWVSVDKNSGVVITVEPI 454


>gi|126116589 fibrocystin L [Homo sapiens]
          Length = 4243

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 167 AVLSNKLCLSISNLVQGVNVHLGTLIGLNPVGPESQIRYSMVSVPTVTSDYISLEVNAVL 226
           AV   ++  S S ++Q V V   TL         ++++   V+ P V ++  SL    ++
Sbjct: 493 AVNEEQVIKSQSTILQEVQVI--TLENWETTNAINEVQKIKVTSPCVEANSCSLYQYRLI 550

Query: 227 FLLGKPIILPTDATPFVL 244
           + + K + LP DA+ F+L
Sbjct: 551 YNMEKTVFLPADASEFIL 568


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,133,150
Number of Sequences: 37866
Number of extensions: 614384
Number of successful extensions: 1503
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1484
Number of HSP's gapped (non-prelim): 15
length of query: 458
length of database: 18,247,518
effective HSP length: 106
effective length of query: 352
effective length of database: 14,233,722
effective search space: 5010270144
effective search space used: 5010270144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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