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Search of human proteins with 14574566
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14574566 allograft inflammatory factor 1 isoform 1 [Homo
sapiens]
(93 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14574568 allograft inflammatory factor 1 isoform 3 [Homo sapi... 185 6e-48
gi|14574566 allograft inflammatory factor 1 isoform 1 [Homo sapi... 185 6e-48
gi|13899241 ionized calcium binding adapter molecule 2 isoform 1... 127 2e-30
gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo sapiens] 109 5e-25
gi|20149675 EF-hand domain family, member D2 [Homo sapiens] 51 2e-07
gi|20149496 EF-hand domain family, member D1 [Homo sapiens] 50 3e-07
gi|4757974 centrin 1 [Homo sapiens] 42 8e-05
gi|4757902 caltractin [Homo sapiens] 42 1e-04
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 39 7e-04
gi|50897266 calmodulin-like 6 [Homo sapiens] 39 7e-04
gi|4885111 calmodulin-like 3 [Homo sapiens] 39 0.001
gi|11067753 calcium binding protein 5 [Homo sapiens] 37 0.003
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] 36 0.006
gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens] 36 0.006
gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens] 36 0.006
gi|223278387 calmodulin-like 5 [Homo sapiens] 35 0.017
gi|4507615 troponin C, slow [Homo sapiens] 34 0.022
gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens] 31 0.19
gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens] 31 0.19
gi|46397403 centrin 3 [Homo sapiens] 30 0.42
gi|38348382 spermatogenesis associated 21 [Homo sapiens] 29 0.71
gi|38570109 CAP-binding protein complex interacting protein 1 is... 28 2.1
gi|38570107 CAP-binding protein complex interacting protein 1 is... 28 2.1
gi|42717999 dystrobrevin alpha isoform 2 [Homo sapiens] 28 2.1
gi|42718005 dystrobrevin alpha isoform 1 [Homo sapiens] 28 2.1
gi|42718003 dystrobrevin alpha isoform 3 [Homo sapiens] 28 2.1
gi|42718001 dystrobrevin alpha isoform 4 [Homo sapiens] 28 2.1
gi|42717997 dystrobrevin alpha isoform 5 [Homo sapiens] 28 2.1
gi|42717994 dystrobrevin alpha isoform 7 [Homo sapiens] 28 2.1
gi|189571587 dystrobrevin alpha isoform 9 [Homo sapiens] 28 2.1
>gi|14574568 allograft inflammatory factor 1 isoform 3 [Homo
sapiens]
Length = 147
Score = 185 bits (470), Expect = 6e-48
Identities = 93/93 (100%), Positives = 93/93 (100%)
Query: 1 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 60
MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR
Sbjct: 55 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 114
Query: 61 SAILKMILMYEEKAREKEKPTGPPAKKAISELP 93
SAILKMILMYEEKAREKEKPTGPPAKKAISELP
Sbjct: 115 SAILKMILMYEEKAREKEKPTGPPAKKAISELP 147
>gi|14574566 allograft inflammatory factor 1 isoform 1 [Homo
sapiens]
Length = 93
Score = 185 bits (470), Expect = 6e-48
Identities = 93/93 (100%), Positives = 93/93 (100%)
Query: 1 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 60
MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR
Sbjct: 1 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 60
Query: 61 SAILKMILMYEEKAREKEKPTGPPAKKAISELP 93
SAILKMILMYEEKAREKEKPTGPPAKKAISELP
Sbjct: 61 SAILKMILMYEEKAREKEKPTGPPAKKAISELP 93
>gi|13899241 ionized calcium binding adapter molecule 2 isoform 1
[Homo sapiens]
Length = 150
Score = 127 bits (319), Expect = 2e-30
Identities = 60/94 (63%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
Query: 1 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 60
MEFDLN G+ID+MSLKRM+EKLGVPKTHLE+KK+I EV+ G +T SY DF+ MMLGKR
Sbjct: 57 MEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKR 116
Query: 61 SAILKMILMYEEKAREKE-KPTGPPAKKAISELP 93
SA+LK+++M+E KA E KP GPP ++ I+ LP
Sbjct: 117 SAVLKLVMMFEGKANESSPKPVGPPPERDIASLP 150
>gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo sapiens]
Length = 132
Score = 109 bits (272), Expect = 5e-25
Identities = 55/55 (100%), Positives = 55/55 (100%)
Query: 12 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 66
DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM
Sbjct: 78 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 132
Score = 27.7 bits (60), Expect = 2.1
Identities = 11/11 (100%), Positives = 11/11 (100%)
Query: 1 MEFDLNGNGDI 11
MEFDLNGNGDI
Sbjct: 1 MEFDLNGNGDI 11
>gi|20149675 EF-hand domain family, member D2 [Homo sapiens]
Length = 240
Score = 50.8 bits (120), Expect = 2e-07
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 2 EFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFL 53
++D +G ID+M LK M+EKLG P+THL LK +I EV S+ +FL
Sbjct: 103 QYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFL 154
>gi|20149496 EF-hand domain family, member D1 [Homo sapiens]
Length = 239
Score = 50.4 bits (119), Expect = 3e-07
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSA 62
+D +G ID+M LK M+EKLG P+THL LK +I EV S+ +FL
Sbjct: 102 YDAGRDGFIDLMELKLMMEKLGAPQTHLGLKSMIKEVDEDFDGKLSFREFL--------- 152
Query: 63 ILKMILMYEEKAREKEKPTGPPAKKAISEL 92
++ ++ A E ++ +G A +SE+
Sbjct: 153 ----LIFHKAAAGELQEDSGLMALAKLSEI 178
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 42.4 bits (98), Expect = 8e-05
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRS- 61
FD++G+G ID LK + LG E+KK+I EV S+ DFL +M K S
Sbjct: 40 FDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMSE 99
Query: 62 -----AILKMILMYEE 72
ILK ++++
Sbjct: 100 KDTKEEILKAFRLFDD 115
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 56
FD + G I +LKR+ +LG T EL+++I E + +FLR+M
Sbjct: 113 FDDDETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIM 166
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 41.6 bits (96), Expect = 1e-04
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRS- 61
FD +G G ID+ LK + LG E+KK+I E+ ++ DFL +M K S
Sbjct: 40 FDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSE 99
Query: 62 -----AILKMILMYEE 72
ILK ++++
Sbjct: 100 KDTKEEILKAFKLFDD 115
Score = 33.5 bits (75), Expect = 0.038
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 56
FD + G I +LKR+ ++LG T EL+++I E S +FLR+M
Sbjct: 113 FDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 166
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 39.3 bits (90), Expect = 7e-04
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMML 57
FD +G GDI + L ++ LG T EL +I EV T + +FL MM+
Sbjct: 27 FDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 81
Score = 28.9 bits (63), Expect = 0.93
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLG 58
FD N +G ID L + G T E++ L+ + + + +FL+MM G
Sbjct: 103 FDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEG 158
>gi|50897266 calmodulin-like 6 [Homo sapiens]
Length = 181
Score = 39.3 bits (90), Expect = 7e-04
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSA 62
FD G G ID +LK +L G P +E ++++ E T Y +F+ MM G+
Sbjct: 119 FDKEGKGYIDWNTLKYVLMNAGEPLNEVEAEQMMKEADKDGDRTIDYEEFVAMMTGESFK 178
Query: 63 ILK 65
+++
Sbjct: 179 LIQ 181
Score = 32.0 bits (71), Expect = 0.11
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSA 62
FD GNG++ L+ ++ LG+ T EL + +V + F+ FL +M
Sbjct: 45 FDEEGNGEVKTGELEWLMSLLGINPTKSELASMAKDVDRDNKGFFNCDGFLALM------ 98
Query: 63 ILKMILMYEEKAREKE 78
+Y EKA+ +E
Sbjct: 99 -----GVYHEKAQNQE 109
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 38.5 bits (88), Expect = 0.001
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 59
FD +G+G I L ++ LG T EL+ ++ E+ T +P+FL MM K
Sbjct: 20 FDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARK 76
Score = 32.7 bits (73), Expect = 0.065
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 59
FD +GNG + L+ ++ +LG + E+ ++I + +Y +F+R+++ K
Sbjct: 93 FDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK 149
>gi|11067753 calcium binding protein 5 [Homo sapiens]
Length = 173
Score = 37.0 bits (84), Expect = 0.003
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 2 EFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 56
EFD NG+G+I ++ L++ +++ LG T E+ +++ E T + +F++MM
Sbjct: 116 EFDTNGDGEITLVELQQAMQRLLGERLTPREISEVVREADVNGDGTVDFEEFVKMM 171
Score = 32.7 bits (73), Expect = 0.065
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 1 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 60
+EFD + +G I L ++ +G T +EL +L ++ G + DF+ +M K
Sbjct: 38 LEFDKDRDGFISCKDLGNLMRTMGYMPTEMELIELGQQIRMNLGGRVDFDDFVELMTPKL 97
Query: 61 SA-ILKMILMYEEKAREKEKPTGPPAKKAISEL 92
A MI + E + KE T + + EL
Sbjct: 98 LAETAGMIGVQEMRDAFKEFDTNGDGEITLVEL 130
>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
Length = 370
Score = 36.2 bits (82), Expect = 0.006
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 2 EFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 56
EFD NG+G+I L+ + K LG H +++++I +V + +F+RMM
Sbjct: 313 EFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 368
Score = 31.2 bits (69), Expect = 0.19
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 2 EFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRS 61
EFD + +G I+ L + +G T +EL +L +++ G + DF+ +M K
Sbjct: 236 EFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLL 295
Query: 62 A-ILKMILMYEEKAREKEKPTGPPAKKAISEL 92
A MI + E + +E T + + SEL
Sbjct: 296 AETADMIGVKELRDAFREFDTNGDGEISTSEL 327
>gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens]
Length = 167
Score = 36.2 bits (82), Expect = 0.006
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 2 EFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 56
EFD NG+G+I L+ + K LG H +++++I +V + +F+RMM
Sbjct: 110 EFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 165
Score = 31.2 bits (69), Expect = 0.19
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 2 EFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRS 61
EFD + +G I+ L + +G T +EL +L +++ G + DF+ +M K
Sbjct: 33 EFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLL 92
Query: 62 A-ILKMILMYEEKAREKEKPTGPPAKKAISEL 92
A MI + E + +E T + + SEL
Sbjct: 93 AETADMIGVKELRDAFREFDTNGDGEISTSEL 124
>gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens]
Length = 227
Score = 36.2 bits (82), Expect = 0.006
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 2 EFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 56
EFD NG+G+I L+ + K LG H +++++I +V + +F+RMM
Sbjct: 170 EFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 225
Score = 31.2 bits (69), Expect = 0.19
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 2 EFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRS 61
EFD + +G I+ L + +G T +EL +L +++ G + DF+ +M K
Sbjct: 93 EFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLL 152
Query: 62 A-ILKMILMYEEKAREKEKPTGPPAKKAISEL 92
A MI + E + +E T + + SEL
Sbjct: 153 AETADMIGVKELRDAFREFDTNGDGEISTSEL 184
>gi|223278387 calmodulin-like 5 [Homo sapiens]
Length = 146
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 56
FD +G+G I + L+R + LG P EL +I E +Y +F RM+
Sbjct: 90 FDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARML 143
Score = 34.3 bits (77), Expect = 0.022
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 4 DLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFL 53
D +GNG I+ L L+ G + +L+KLI EV S S+ +FL
Sbjct: 21 DTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDGDGEISFQEFL 70
>gi|4507615 troponin C, slow [Homo sapiens]
Length = 161
Score = 34.3 bits (77), Expect = 0.022
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLG 58
FD N +G ID+ LK ML+ G T ++++L+ + + Y +FL M G
Sbjct: 104 FDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 29.6 bits (65), Expect = 0.55
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 8 NGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMML 57
+G I L +++ LG T EL+++I EV T + +FL MM+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens]
Length = 163
Score = 31.2 bits (69), Expect = 0.19
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 EFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 56
EFD NG+G I + L+ L+ LG + E+ +++ +V + +F+RMM
Sbjct: 106 EFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDVDLNGDGLVDFEEFVRMM 161
Score = 28.9 bits (63), Expect = 0.93
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 2 EFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRS 61
EFD + +G I L + LG T +EL ++ ++S G + DF+ +M K
Sbjct: 32 EFDRDRDGYIGCRELGACMRTLGYMPTEMELIEISQQISGGK---VDFEDFVELMGPKLL 88
Query: 62 A-ILKMILMYEEKAREKEKPTGPPAKKAISEL 92
A MI + E + +E T + ++ EL
Sbjct: 89 AETADMIGVRELRDAFREFDTNGDGRISVGEL 120
>gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens]
Length = 220
Score = 31.2 bits (69), Expect = 0.19
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 2 EFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 56
EFD NG+G I + L+ L+ LG + E+ +++ +V + +F+RMM
Sbjct: 163 EFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDVDLNGDGLVDFEEFVRMM 218
Score = 28.9 bits (63), Expect = 0.93
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 2 EFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRS 61
EFD + +G I L + LG T +EL ++ ++S G + DF+ +M K
Sbjct: 89 EFDRDRDGYIGCRELGACMRTLGYMPTEMELIEISQQISGGK---VDFEDFVELMGPKLL 145
Query: 62 A-ILKMILMYEEKAREKEKPTGPPAKKAISEL 92
A MI + E + +E T + ++ EL
Sbjct: 146 AETADMIGVRELRDAFREFDTNGDGRISVGEL 177
>gi|46397403 centrin 3 [Homo sapiens]
Length = 167
Score = 30.0 bits (66), Expect = 0.42
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLG 58
FD + +G I + +L+R+ +LG + EL+ +I E + +F+ +M G
Sbjct: 110 FDDDDSGKISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIMTG 165
>gi|38348382 spermatogenesis associated 21 [Homo sapiens]
Length = 469
Score = 29.3 bits (64), Expect = 0.71
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 6 NGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILK 65
NG G++D SLK +L +G T +++ + + DFL +M R +
Sbjct: 234 NGPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFKDFLAVMTDTR----R 289
Query: 66 MILMYEEKAREKEKPTGP 83
E+ A P P
Sbjct: 290 FFCSVEQNALSDMAPHNP 307
>gi|38570109 CAP-binding protein complex interacting protein 1 isoform
b [Homo sapiens]
Length = 1349
Score = 27.7 bits (60), Expect = 2.1
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 2 EFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR----MML 57
E D+ GDI+ ++EK + + E ++LI + S F+Y DF++ ++
Sbjct: 1182 EKDVARQGDINASDFLALVEKFNLDISKEECQQLIIKYDLKSNGKFAYCDFIQSCVLLLK 1241
Query: 58 GKRSAIL-KMILMYEEKARE 76
K S+++ +M + K +E
Sbjct: 1242 AKESSLMHRMKIQNAHKMKE 1261
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 1 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDF 52
++F NG I++ K++LE G+P + L ++ E SY DF
Sbjct: 492 LDFSKEPNGKINVHDFKKVLEDTGMPMDDDQYALLTTKIGF-EKEGMSYLDF 542
>gi|38570107 CAP-binding protein complex interacting protein 1 isoform
a [Homo sapiens]
Length = 1501
Score = 27.7 bits (60), Expect = 2.1
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 2 EFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR----MML 57
E D+ GDI+ ++EK + + E ++LI + S F+Y DF++ ++
Sbjct: 1334 EKDVARQGDINASDFLALVEKFNLDISKEECQQLIIKYDLKSNGKFAYCDFIQSCVLLLK 1393
Query: 58 GKRSAIL-KMILMYEEKARE 76
K S+++ +M + K +E
Sbjct: 1394 AKESSLMHRMKIQNAHKMKE 1413
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 1 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDF 52
++F NG I++ K++LE G+P + L ++ E SY DF
Sbjct: 644 LDFSKEPNGKINVHDFKKVLEDTGMPMDDDQYALLTTKIGF-EKEGMSYLDF 694
>gi|42717999 dystrobrevin alpha isoform 2 [Homo sapiens]
Length = 686
Score = 27.7 bits (60), Expect = 2.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETF--SYPDFLRMMLGKR 60
FD G+G I + ++K L L K +L+ + +S SG Y FLR +L
Sbjct: 119 FDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLP 178
Query: 61 SAILK 65
+A+ +
Sbjct: 179 TAVFE 183
>gi|42718005 dystrobrevin alpha isoform 1 [Homo sapiens]
Length = 743
Score = 27.7 bits (60), Expect = 2.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETF--SYPDFLRMMLGKR 60
FD G+G I + ++K L L K +L+ + +S SG Y FLR +L
Sbjct: 119 FDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLP 178
Query: 61 SAILK 65
+A+ +
Sbjct: 179 TAVFE 183
>gi|42718003 dystrobrevin alpha isoform 3 [Homo sapiens]
Length = 570
Score = 27.7 bits (60), Expect = 2.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETF--SYPDFLRMMLGKR 60
FD G+G I + ++K L L K +L+ + +S SG Y FLR +L
Sbjct: 119 FDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLP 178
Query: 61 SAILK 65
+A+ +
Sbjct: 179 TAVFE 183
>gi|42718001 dystrobrevin alpha isoform 4 [Homo sapiens]
Length = 567
Score = 27.7 bits (60), Expect = 2.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETF--SYPDFLRMMLGKR 60
FD G+G I + ++K L L K +L+ + +S SG Y FLR +L
Sbjct: 119 FDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLP 178
Query: 61 SAILK 65
+A+ +
Sbjct: 179 TAVFE 183
>gi|42717997 dystrobrevin alpha isoform 5 [Homo sapiens]
Length = 513
Score = 27.7 bits (60), Expect = 2.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETF--SYPDFLRMMLGKR 60
FD G+G I + ++K L L K +L+ + +S SG Y FLR +L
Sbjct: 119 FDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLP 178
Query: 61 SAILK 65
+A+ +
Sbjct: 179 TAVFE 183
>gi|42717994 dystrobrevin alpha isoform 7 [Homo sapiens]
Length = 374
Score = 27.7 bits (60), Expect = 2.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETF--SYPDFLRMMLGKR 60
FD G+G I + ++K L L K +L+ + +S SG Y FLR +L
Sbjct: 119 FDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLP 178
Query: 61 SAILK 65
+A+ +
Sbjct: 179 TAVFE 183
>gi|189571587 dystrobrevin alpha isoform 9 [Homo sapiens]
Length = 371
Score = 27.7 bits (60), Expect = 2.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 3 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETF--SYPDFLRMMLGKR 60
FD G+G I + ++K L L K +L+ + +S SG Y FLR +L
Sbjct: 119 FDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLP 178
Query: 61 SAILK 65
+A+ +
Sbjct: 179 TAVFE 183
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.136 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,674,193
Number of Sequences: 37866
Number of extensions: 138486
Number of successful extensions: 421
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 351
Number of HSP's gapped (non-prelim): 84
length of query: 93
length of database: 18,247,518
effective HSP length: 64
effective length of query: 29
effective length of database: 15,824,094
effective search space: 458898726
effective search space used: 458898726
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.