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Search of human proteins with 145275185
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145275185 MYG1 protein [Homo sapiens]
(376 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145275185 MYG1 protein [Homo sapiens] 780 0.0
gi|167621456 kinase suppressor of ras 2 [Homo sapiens] 33 0.55
gi|183396780 ubiquitin specific protease 20 [Homo sapiens] 32 0.71
gi|183397136 ubiquitin specific protease 20 [Homo sapiens] 32 0.71
gi|183397134 ubiquitin specific protease 20 [Homo sapiens] 32 0.71
gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isofor... 32 0.93
gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isofor... 32 0.93
gi|189217919 protein associated with topoisomerase II homolog 1 ... 31 2.1
gi|42516561 ubiquitin specific protease 33 isoform 3 [Homo sapiens] 30 2.7
gi|42516567 ubiquitin specific protease 33 isoform 1 [Homo sapiens] 30 2.7
gi|42516565 ubiquitin specific protease 33 isoform 2 [Homo sapiens] 30 2.7
gi|27437045 colony stimulating factor 3 receptor isoform d precu... 30 2.7
gi|24496783 colony stimulating factor 3 receptor isoform c precu... 30 2.7
gi|27437042 colony stimulating factor 3 receptor isoform b precu... 30 2.7
gi|4503081 colony stimulating factor 3 receptor isoform a precur... 30 2.7
gi|186972143 tripeptidyl peptidase II [Homo sapiens] 30 2.7
gi|239746699 PREDICTED: hypothetical protein XP_002343813 [Homo ... 30 3.5
gi|47132600 DNA fragmentation factor, 45kDa, alpha polypeptide i... 30 4.6
gi|49355781 abhydrolase domain containing 13 [Homo sapiens] 29 6.0
gi|21070984 peptidylglycine alpha-amidating monooxygenase isofor... 29 7.9
gi|21070982 peptidylglycine alpha-amidating monooxygenase isofor... 29 7.9
gi|21070974 peptidylglycine alpha-amidating monooxygenase isofor... 29 7.9
>gi|145275185 MYG1 protein [Homo sapiens]
Length = 376
Score = 780 bits (2015), Expect = 0.0
Identities = 376/376 (100%), Positives = 376/376 (100%)
Query: 1 MGHQFLRGLLTLLLPPPPLYTRHRMLGPESVPPPKRSRSKLMAPPRIGTHNGTFHCDEAL 60
MGHQFLRGLLTLLLPPPPLYTRHRMLGPESVPPPKRSRSKLMAPPRIGTHNGTFHCDEAL
Sbjct: 1 MGHQFLRGLLTLLLPPPPLYTRHRMLGPESVPPPKRSRSKLMAPPRIGTHNGTFHCDEAL 60
Query: 61 ACALLRLLPEYRDAEIVRTRDPEKLASCDIVVDVGGEYDPRRHRYDHHQRSFTETMSSLS 120
ACALLRLLPEYRDAEIVRTRDPEKLASCDIVVDVGGEYDPRRHRYDHHQRSFTETMSSLS
Sbjct: 61 ACALLRLLPEYRDAEIVRTRDPEKLASCDIVVDVGGEYDPRRHRYDHHQRSFTETMSSLS 120
Query: 121 PGKPWQTKLSSAGLIYLHFGHKLLAQLLGTSEEDSMVGTLYDKMYENFVEEVDAVDNGIS 180
PGKPWQTKLSSAGLIYLHFGHKLLAQLLGTSEEDSMVGTLYDKMYENFVEEVDAVDNGIS
Sbjct: 121 PGKPWQTKLSSAGLIYLHFGHKLLAQLLGTSEEDSMVGTLYDKMYENFVEEVDAVDNGIS 180
Query: 181 QWAEGEPRYALTTTLSARVARLNPTWNHPDQDTEAGFKRAMDLVQEEFLQRLDFYQHSWL 240
QWAEGEPRYALTTTLSARVARLNPTWNHPDQDTEAGFKRAMDLVQEEFLQRLDFYQHSWL
Sbjct: 181 QWAEGEPRYALTTTLSARVARLNPTWNHPDQDTEAGFKRAMDLVQEEFLQRLDFYQHSWL 240
Query: 241 PARALVEEALAQRFQVDPSGEIVELAKGACPWKEHLYHLESGLSPPVAIFFVIYTDQAGQ 300
PARALVEEALAQRFQVDPSGEIVELAKGACPWKEHLYHLESGLSPPVAIFFVIYTDQAGQ
Sbjct: 241 PARALVEEALAQRFQVDPSGEIVELAKGACPWKEHLYHLESGLSPPVAIFFVIYTDQAGQ 300
Query: 301 WRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIFVHASGFIGGHHTREGALS 360
WRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIFVHASGFIGGHHTREGALS
Sbjct: 301 WRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIFVHASGFIGGHHTREGALS 360
Query: 361 MARATLAQRSYLPQIS 376
MARATLAQRSYLPQIS
Sbjct: 361 MARATLAQRSYLPQIS 376
>gi|167621456 kinase suppressor of ras 2 [Homo sapiens]
Length = 921
Score = 32.7 bits (73), Expect = 0.55
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Query: 13 LLPPPPLYTRHRMLGPESVPPPKRSRSKLMAPPR 46
L PPPPL + HR S+PP R R + PPR
Sbjct: 206 LCPPPPLESGHR-----SLPPSPRQRHAVRTPPR 234
>gi|183396780 ubiquitin specific protease 20 [Homo sapiens]
Length = 914
Score = 32.3 bits (72), Expect = 0.71
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 163 KMYENFVEEVDAVDNGISQWAEGEPRYALTTTLSARVARLNPTW-NHPDQDTEAGFKRAM 221
K Y+ V EV W + P Y + T+LS + +NP + + QDT+ + M
Sbjct: 190 KSYQKLVSEV---------WHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM 240
Query: 222 DLVQEE 227
D + EE
Sbjct: 241 DQLHEE 246
>gi|183397136 ubiquitin specific protease 20 [Homo sapiens]
Length = 914
Score = 32.3 bits (72), Expect = 0.71
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 163 KMYENFVEEVDAVDNGISQWAEGEPRYALTTTLSARVARLNPTW-NHPDQDTEAGFKRAM 221
K Y+ V EV W + P Y + T+LS + +NP + + QDT+ + M
Sbjct: 190 KSYQKLVSEV---------WHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM 240
Query: 222 DLVQEE 227
D + EE
Sbjct: 241 DQLHEE 246
>gi|183397134 ubiquitin specific protease 20 [Homo sapiens]
Length = 914
Score = 32.3 bits (72), Expect = 0.71
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 163 KMYENFVEEVDAVDNGISQWAEGEPRYALTTTLSARVARLNPTW-NHPDQDTEAGFKRAM 221
K Y+ V EV W + P Y + T+LS + +NP + + QDT+ + M
Sbjct: 190 KSYQKLVSEV---------WHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM 240
Query: 222 DLVQEE 227
D + EE
Sbjct: 241 DQLHEE 246
>gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isoform
B [Homo sapiens]
Length = 336
Score = 32.0 bits (71), Expect = 0.93
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 12 LLLPPPPLYTRHRMLGPESVPPPKRSRSKLMAPPRIGTHNGTFHCDEALACALLRLLPEY 71
LL P PP Y + + GPE PPP S+L P + T G A A L P
Sbjct: 16 LLDPEPPRYLQS-LSGPELPPPPPDRSSRLCVPAPLSTAPGAREGRSARRAARGNLEPPP 74
Query: 72 RDAEIVRTRDP 82
R + R P
Sbjct: 75 RASRPARPLRP 85
>gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isoform
A [Homo sapiens]
Length = 418
Score = 32.0 bits (71), Expect = 0.93
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 12 LLLPPPPLYTRHRMLGPESVPPPKRSRSKLMAPPRIGTHNGTFHCDEALACALLRLLPEY 71
LL P PP Y + + GPE PPP S+L P + T G A A L P
Sbjct: 16 LLDPEPPRYLQS-LSGPELPPPPPDRSSRLCVPAPLSTAPGAREGRSARRAARGNLEPPP 74
Query: 72 RDAEIVRTRDP 82
R + R P
Sbjct: 75 RASRPARPLRP 85
>gi|189217919 protein associated with topoisomerase II homolog 1
[Homo sapiens]
Length = 770
Score = 30.8 bits (68), Expect = 2.1
Identities = 42/205 (20%), Positives = 76/205 (37%), Gaps = 34/205 (16%)
Query: 1 MGHQFLRGLLTLLLPPPPLYTRHRMLGPESVPPPKRSRSKLMAPPRIGTHNGTFHCDEAL 60
M + L+G + +LPP P + P + PPP++ PP G H +
Sbjct: 296 MNPKLLQGRVGQMLPPAPGFRAFFSAPPSATPPPQQH------PPGPGPHLQNLRSQAPM 349
Query: 61 -ACALLRLLPEYRDAEIVRTRDPEKLASCDIVVDVGGEYDPRRHRYDH--HQRSFTETMS 117
L P++R ++ R + + ++ G D HR H H R
Sbjct: 350 FRPDTTHLHPQHR--RLLHQRQQQNRSQHR---NLNGAGDRGSHRSSHQDHLRKDPYANL 404
Query: 118 SLSPGKPWQTKLSSAGLIYLHFGHKLLAQLLGTSEEDSMVGTLYDKMYENFVEEVDAVDN 177
L K W +K+ Q++ D + Y Y+N+ E+++ +
Sbjct: 405 MLQREKDWVSKI----------------QMMQLQSTDPYLDDFY---YQNYFEKLEKLSA 445
Query: 178 GISQWAEGEPRYALTTTLSARVARL 202
+G P+ T ++ +VA+L
Sbjct: 446 AEEIQGDG-PKKERTKLITPQVAKL 469
>gi|42516561 ubiquitin specific protease 33 isoform 3 [Homo sapiens]
Length = 828
Score = 30.4 bits (67), Expect = 2.7
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 182 WAEGEPRYALTTTLSARVARLNPTWN-HPDQDTEAGFKRAMDLVQEEFLQRL 232
W + P + TTL + +NPT+ + QD + + MDL+ EE +++
Sbjct: 240 WHKSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQV 291
>gi|42516567 ubiquitin specific protease 33 isoform 1 [Homo sapiens]
Length = 942
Score = 30.4 bits (67), Expect = 2.7
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 182 WAEGEPRYALTTTLSARVARLNPTWN-HPDQDTEAGFKRAMDLVQEEFLQRL 232
W + P + TTL + +NPT+ + QD + + MDL+ EE +++
Sbjct: 240 WHKSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQV 291
>gi|42516565 ubiquitin specific protease 33 isoform 2 [Homo sapiens]
Length = 911
Score = 30.4 bits (67), Expect = 2.7
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 182 WAEGEPRYALTTTLSARVARLNPTWN-HPDQDTEAGFKRAMDLVQEEFLQRL 232
W + P + TTL + +NPT+ + QD + + MDL+ EE +++
Sbjct: 209 WHKSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQV 260
>gi|27437045 colony stimulating factor 3 receptor isoform d
precursor [Homo sapiens]
Length = 783
Score = 30.4 bits (67), Expect = 2.7
Identities = 35/151 (23%), Positives = 56/151 (37%), Gaps = 22/151 (14%)
Query: 182 WAEGEPRYALTTTLSARVARLNPTWNHPDQDTEAGFKRAMDLVQEEFLQRLDFYQHSWLP 241
W++ P L TT A RL+ W D + EE R+ Y SW P
Sbjct: 318 WSDWSPSLELRTTERAPTVRLDTWWRQRQLDPRTVQLFWKPVPLEEDSGRIQGYVVSWRP 377
Query: 242 ---ARALV----EEALAQRFQVDPSGEIVELAKGACPWKEHLYHLESGLSPPVAIFFVIY 294
A A++ L+ F + + V L + + +G S P V++
Sbjct: 378 SGQAGAILPLCNTTELSCTFHLPSEAQEVAL----------VAYNSAGTSRPTP---VVF 424
Query: 295 TDQAGQ--WRIQCVPKEPHSFQSRLPLPEPW 323
++ G R+ + ++PHS P PW
Sbjct: 425 SESRGPALTRLHAMARDPHSLWVGWEPPNPW 455
>gi|24496783 colony stimulating factor 3 receptor isoform c
precursor [Homo sapiens]
Length = 863
Score = 30.4 bits (67), Expect = 2.7
Identities = 35/151 (23%), Positives = 56/151 (37%), Gaps = 22/151 (14%)
Query: 182 WAEGEPRYALTTTLSARVARLNPTWNHPDQDTEAGFKRAMDLVQEEFLQRLDFYQHSWLP 241
W++ P L TT A RL+ W D + EE R+ Y SW P
Sbjct: 318 WSDWSPSLELRTTERAPTVRLDTWWRQRQLDPRTVQLFWKPVPLEEDSGRIQGYVVSWRP 377
Query: 242 ---ARALV----EEALAQRFQVDPSGEIVELAKGACPWKEHLYHLESGLSPPVAIFFVIY 294
A A++ L+ F + + V L + + +G S P V++
Sbjct: 378 SGQAGAILPLCNTTELSCTFHLPSEAQEVAL----------VAYNSAGTSRPTP---VVF 424
Query: 295 TDQAGQ--WRIQCVPKEPHSFQSRLPLPEPW 323
++ G R+ + ++PHS P PW
Sbjct: 425 SESRGPALTRLHAMARDPHSLWVGWEPPNPW 455
>gi|27437042 colony stimulating factor 3 receptor isoform b
precursor [Homo sapiens]
Length = 769
Score = 30.4 bits (67), Expect = 2.7
Identities = 35/151 (23%), Positives = 56/151 (37%), Gaps = 22/151 (14%)
Query: 182 WAEGEPRYALTTTLSARVARLNPTWNHPDQDTEAGFKRAMDLVQEEFLQRLDFYQHSWLP 241
W++ P L TT A RL+ W D + EE R+ Y SW P
Sbjct: 318 WSDWSPSLELRTTERAPTVRLDTWWRQRQLDPRTVQLFWKPVPLEEDSGRIQGYVVSWRP 377
Query: 242 ---ARALV----EEALAQRFQVDPSGEIVELAKGACPWKEHLYHLESGLSPPVAIFFVIY 294
A A++ L+ F + + V L + + +G S P V++
Sbjct: 378 SGQAGAILPLCNTTELSCTFHLPSEAQEVAL----------VAYNSAGTSRPTP---VVF 424
Query: 295 TDQAGQ--WRIQCVPKEPHSFQSRLPLPEPW 323
++ G R+ + ++PHS P PW
Sbjct: 425 SESRGPALTRLHAMARDPHSLWVGWEPPNPW 455
>gi|4503081 colony stimulating factor 3 receptor isoform a precursor
[Homo sapiens]
Length = 836
Score = 30.4 bits (67), Expect = 2.7
Identities = 35/151 (23%), Positives = 56/151 (37%), Gaps = 22/151 (14%)
Query: 182 WAEGEPRYALTTTLSARVARLNPTWNHPDQDTEAGFKRAMDLVQEEFLQRLDFYQHSWLP 241
W++ P L TT A RL+ W D + EE R+ Y SW P
Sbjct: 318 WSDWSPSLELRTTERAPTVRLDTWWRQRQLDPRTVQLFWKPVPLEEDSGRIQGYVVSWRP 377
Query: 242 ---ARALV----EEALAQRFQVDPSGEIVELAKGACPWKEHLYHLESGLSPPVAIFFVIY 294
A A++ L+ F + + V L + + +G S P V++
Sbjct: 378 SGQAGAILPLCNTTELSCTFHLPSEAQEVAL----------VAYNSAGTSRPTP---VVF 424
Query: 295 TDQAGQ--WRIQCVPKEPHSFQSRLPLPEPW 323
++ G R+ + ++PHS P PW
Sbjct: 425 SESRGPALTRLHAMARDPHSLWVGWEPPNPW 455
>gi|186972143 tripeptidyl peptidase II [Homo sapiens]
Length = 1249
Score = 30.4 bits (67), Expect = 2.7
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 169 VEEVDAVDNG-ISQWAEGEPRYALTTTLSARVARLNPTWNHPDQDTEAGFKRAMDLVQEE 227
V+ +D +G ++ E EP+ LS RV ++ +W +P G K D +
Sbjct: 65 VDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDFYPKA 124
Query: 228 FLQRL--DFYQHSWLPA-RALVEEALAQRFQVD 257
+R+ + + W P R + EA ++ + D
Sbjct: 125 LKERIQKERKEKIWDPVHRVALAEACRKQEEFD 157
>gi|239746699 PREDICTED: hypothetical protein XP_002343813 [Homo
sapiens]
Length = 140
Score = 30.0 bits (66), Expect = 3.5
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 15 PPPPLYTRHR--MLGPESVPPPKRSRSKLMAPP 45
PPPPL R R GP PP S L APP
Sbjct: 106 PPPPLRRREREAAAGPPQAPPQPFQVSNLEAPP 138
>gi|47132600 DNA fragmentation factor, 45kDa, alpha polypeptide
isoform 2 [Homo sapiens]
Length = 268
Score = 29.6 bits (65), Expect = 4.6
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 158 GTLYDKMYEN---FVEEVDAVDNGISQWAEGEPRYALTTTLSARVARLNPTWNHPDQDTE 214
G+L K E+ F EEVDAVD GIS+ + A + L+A + P + QD E
Sbjct: 203 GSLLSKQEESKAAFGEEVDAVDTGISRETSSDVALA-SHILTALREKQAPELSLSSQDLE 261
Query: 215 AG 216
G
Sbjct: 262 VG 263
>gi|49355781 abhydrolase domain containing 13 [Homo sapiens]
Length = 337
Score = 29.3 bits (64), Expect = 6.0
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 5 FLRGLLTLLLPPPPLYTRHRMLGPESVPPPKRSRSKLMAPPRIGTHNGTFHCDEALACAL 64
F+ GL L+PP + + + SR+K +A GTHN T+ C + AL
Sbjct: 262 FISGLSDQLIPPVMMKQLYEL---------SPSRTKRLAIFPDGTHNDTWQC-QGYFTAL 311
Query: 65 LRLLPEYRDAEIVRTRDPEKLA 86
+ + E+V++ PE++A
Sbjct: 312 EQFI-----KEVVKSHSPEEMA 328
>gi|21070984 peptidylglycine alpha-amidating monooxygenase isoform a
preproprotein [Homo sapiens]
Length = 974
Score = 28.9 bits (63), Expect = 7.9
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 32 PPPKRSRSKLMAPPRIGT----HNGTFHCDEALACALLRLLP 69
PP R S PP GT H G FH +EAL + LLP
Sbjct: 470 PPESRVFSLQQPPPGEGTWEPEHTGDFHMEEALDWPGVYLLP 511
>gi|21070982 peptidylglycine alpha-amidating monooxygenase isoform d
preproprotein [Homo sapiens]
Length = 887
Score = 28.9 bits (63), Expect = 7.9
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 32 PPPKRSRSKLMAPPRIGT----HNGTFHCDEALACALLRLLP 69
PP R S PP GT H G FH +EAL + LLP
Sbjct: 470 PPESRVFSLQQPPPGEGTWEPEHTGDFHMEEALDWPGVYLLP 511
>gi|21070974 peptidylglycine alpha-amidating monooxygenase isoform b
preproprotein [Homo sapiens]
Length = 905
Score = 28.9 bits (63), Expect = 7.9
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 32 PPPKRSRSKLMAPPRIGT----HNGTFHCDEALACALLRLLP 69
PP R S PP GT H G FH +EAL + LLP
Sbjct: 470 PPESRVFSLQQPPPGEGTWEPEHTGDFHMEEALDWPGVYLLP 511
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,480,174
Number of Sequences: 37866
Number of extensions: 799594
Number of successful extensions: 2365
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2357
Number of HSP's gapped (non-prelim): 22
length of query: 376
length of database: 18,247,518
effective HSP length: 104
effective length of query: 272
effective length of database: 14,309,454
effective search space: 3892171488
effective search space used: 3892171488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Search text |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.