Search of human proteins with 144226251

Search of human proteins with 144226251

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|144226251 chitinase 3-like 1 [Homo sapiens]
         (383 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|144226251 chitinase 3-like 1 [Homo sapiens]                        790   0.0  
gi|4502809 chitotriosidase [Homo sapiens]                             414   e-116
gi|68533255 chitinase 3-like 2 isoform a [Homo sapiens]               409   e-114
gi|68533253 chitinase 3-like 2 isoform b [Homo sapiens]               398   e-111
gi|133893286 acidic chitinase isoform c [Homo sapiens]                387   e-108
gi|68533260 chitinase 3-like 2 isoform c [Homo sapiens]               338   5e-93
gi|58386720 oviductal glycoprotein 1 precursor [Homo sapiens]         328   5e-90
gi|42542398 acidic chitinase isoform a [Homo sapiens]                 266   3e-71
gi|4758092 chitobiase, di-N-acetyl- [Homo sapiens]                     45   1e-04
gi|110624787 5'-3' exoribonuclease 1 isoform b [Homo sapiens]          33   0.56 
gi|110624792 5'-3' exoribonuclease 1 isoform a [Homo sapiens]          33   0.56 
gi|62988276 mitochondrial RNase P protein 3 [Homo sapiens]             31   1.6  
gi|51230412 GTPase activating Rap/RanGAP domain-like 1 isoform 2...    31   2.1  
gi|51226124 GTPase activating Rap/RanGAP domain-like 1 isoform 1...    31   2.1  

>gi|144226251 chitinase 3-like 1 [Homo sapiens]
          Length = 383

 Score =  790 bits (2039), Expect = 0.0
 Identities = 383/383 (100%), Positives = 383/383 (100%)

Query: 1   MGVKASQTGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFAN 60
           MGVKASQTGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFAN
Sbjct: 1   MGVKASQTGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFAN 60

Query: 61  ISNDHIDTWEWNDVTLYGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFI 120
           ISNDHIDTWEWNDVTLYGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFI
Sbjct: 61  ISNDHIDTWEWNDVTLYGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFI 120

Query: 121 KSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKEAQPGKKQLLLSAALSA 180
           KSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKEAQPGKKQLLLSAALSA
Sbjct: 121 KSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKEAQPGKKQLLLSAALSA 180

Query: 181 GKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRFSNTDYA 240
           GKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRFSNTDYA
Sbjct: 181 GKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRFSNTDYA 240

Query: 241 VGYMLRLGAPASKLVMGIPTFGRSFTLASSETGVGAPISGPGIPGRFTKEAGTLAYYEIC 300
           VGYMLRLGAPASKLVMGIPTFGRSFTLASSETGVGAPISGPGIPGRFTKEAGTLAYYEIC
Sbjct: 241 VGYMLRLGAPASKLVMGIPTFGRSFTLASSETGVGAPISGPGIPGRFTKEAGTLAYYEIC 300

Query: 301 DFLRGATVHRILGQQVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQ 360
           DFLRGATVHRILGQQVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQ
Sbjct: 301 DFLRGATVHRILGQQVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQ 360

Query: 361 GSFCGQDLRFPLTNAIKDALAAT 383
           GSFCGQDLRFPLTNAIKDALAAT
Sbjct: 361 GSFCGQDLRFPLTNAIKDALAAT 383


>gi|4502809 chitotriosidase [Homo sapiens]
          Length = 466

 Score =  414 bits (1063), Expect = e-116
 Identities = 202/380 (53%), Positives = 272/380 (71%), Gaps = 9/380 (2%)

Query: 9   GFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDT 68
           GF+VL+++   SA KLVCY+T+W+QYR+G+    P  LD  LCTH+IY+FA ++N  + T
Sbjct: 9   GFMVLLMIPWGSAAKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLST 68

Query: 69  WEWNDVTLYGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKSVPPFLR 128
            EWND TLY   N LK  NP LKTLL++GGWNFG+Q+F+ + +   +R+TF+ S   FLR
Sbjct: 69  TEWNDETLYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLR 128

Query: 129 THGFDGLDLAWLYPGRR-----DKQHFTTLIKEMKAEFIKEAQ-PGKKQLLLSAALSAGK 182
            + FDGLDL W YPG +     DK+ FTTL++++   F +EAQ  GK++LLLSAA+ AG+
Sbjct: 129 KYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQ 188

Query: 183 VTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRFSNTDYAVG 242
             +D+ Y++ KI+Q+LDF+++M YDFHG+W   TGH+SPL++ QE++      N D AV 
Sbjct: 189 TYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQ 248

Query: 243 YMLRLGAPASKLVMGIPTFGRSFTLA-SSETGVGAPISGPGIPGRFTKEAGTLAYYEICD 301
             L+ G PASKL++G+PT+GRSFTLA SS+T VGAP +G G PG FTKE G LAYYE+C 
Sbjct: 249 QWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCS 308

Query: 302 FLRGATVHRILGQQVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQG 361
           + +GAT  RI  Q+VPY  + NQWVG+DD ES K+KV YLK + L GAMVWALDLDDF G
Sbjct: 309 W-KGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAG 367

Query: 362 SFCGQDLRFPLTNAIKDALA 381
             C Q  R+PL   ++  L+
Sbjct: 368 FSCNQG-RYPLIQTLRQELS 386


>gi|68533255 chitinase 3-like 2 isoform a [Homo sapiens]
          Length = 390

 Score =  409 bits (1052), Expect = e-114
 Identities = 197/385 (51%), Positives = 276/385 (71%), Gaps = 4/385 (1%)

Query: 1   MGVKASQTGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFAN 60
           M  K+   G VVL+LLQ  SAYKLVCY+T+WSQ R+  G   P+ +D FLC+H+IYSFA+
Sbjct: 6   MDQKSLWAGVVVLLLLQGGSAYKLVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYSFAS 65

Query: 61  ISNDHIDTWEWNDVTLYGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFI 120
           I N+ +   + ++V LY  +N+LK +NP LK LLS+GG+ FGS+ F  +  ++ SR  FI
Sbjct: 66  IENNKVIIKDKSEVMLYQTINSLKTKNPKLKILLSIGGYLFGSKGFHPMVDSSTSRLEFI 125

Query: 121 KSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKE-AQPGKKQLLLSAALS 179
            S+  FLR H FDGLD++W+YP +++  HFT LI E+   F K+  +  K++LLL+A +S
Sbjct: 126 NSIILFLRNHNFDGLDVSWIYPDQKENTHFTVLIHELAEAFQKDFTKSTKERLLLTAGVS 185

Query: 180 AGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGT--TGHHSPLFRGQEDASPDRFSNT 237
           AG+  ID+SY + K+++ LDFI+++++DFHG+W     TGH+SPL +G +D  P  + N 
Sbjct: 186 AGRQMIDNSYQVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNV 245

Query: 238 DYAVGYMLRLGAPASKLVMGIPTFGRSFTLASSETGVGAPISGPGIPGRFTKEAGTLAYY 297
           +YAVGY +  G P+ K+VMGIPT+G SFTLAS+ET VGAP SGPG  G  T+ +G LAYY
Sbjct: 246 EYAVGYWIHKGMPSEKVVMGIPTYGHSFTLASAETTVGAPASGPGAAGPITESSGFLAYY 305

Query: 298 EICDFLRGATVHRILGQQVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLD 357
           EIC FL+GA + R+  QQVPYA KGNQWVGYDD +S+++KVQ+LK+  L GAM+W++D+D
Sbjct: 306 EICQFLKGAKITRLQDQQVPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMD 365

Query: 358 DFQGSFCGQDLRFPLTNAIKDALAA 382
           DF G  C Q   +PL  A+K +L +
Sbjct: 366 DFTGKSCNQG-PYPLVQAVKRSLGS 389


>gi|68533253 chitinase 3-like 2 isoform b [Homo sapiens]
          Length = 380

 Score =  398 bits (1023), Expect = e-111
 Identities = 188/366 (51%), Positives = 265/366 (72%), Gaps = 4/366 (1%)

Query: 20  SAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDTWEWNDVTLYGM 79
           SAYKLVCY+T+WSQ R+  G   P+ +D FLC+H+IYSFA+I N+ +   + ++V LY  
Sbjct: 15  SAYKLVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYSFASIENNKVIIKDKSEVMLYQT 74

Query: 80  LNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAW 139
           +N+LK +NP LK LLS+GG+ FGS+ F  +  ++ SR  FI S+  FLR H FDGLD++W
Sbjct: 75  INSLKTKNPKLKILLSIGGYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGLDVSW 134

Query: 140 LYPGRRDKQHFTTLIKEMKAEFIKE-AQPGKKQLLLSAALSAGKVTIDSSYDIAKISQHL 198
           +YP +++  HFT LI E+   F K+  +  K++LLL+A +SAG+  ID+SY + K+++ L
Sbjct: 135 IYPDQKENTHFTVLIHELAEAFQKDFTKSTKERLLLTAGVSAGRQMIDNSYQVEKLAKDL 194

Query: 199 DFISIMTYDFHGAWRGT--TGHHSPLFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVM 256
           DFI+++++DFHG+W     TGH+SPL +G +D  P  + N +YAVGY +  G P+ K+VM
Sbjct: 195 DFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHKGMPSEKVVM 254

Query: 257 GIPTFGRSFTLASSETGVGAPISGPGIPGRFTKEAGTLAYYEICDFLRGATVHRILGQQV 316
           GIPT+G SFTLAS+ET VGAP SGPG  G  T+ +G LAYYEIC FL+GA + R+  QQV
Sbjct: 255 GIPTYGHSFTLASAETTVGAPASGPGAAGPITESSGFLAYYEICQFLKGAKITRLQDQQV 314

Query: 317 PYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQGSFCGQDLRFPLTNAI 376
           PYA KGNQWVGYDD +S+++KVQ+LK+  L GAM+W++D+DDF G  C Q   +PL  A+
Sbjct: 315 PYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDFTGKSCNQG-PYPLVQAV 373

Query: 377 KDALAA 382
           K +L +
Sbjct: 374 KRSLGS 379


>gi|133893286 acidic chitinase isoform c [Homo sapiens]
          Length = 476

 Score =  387 bits (994), Expect = e-108
 Identities = 195/381 (51%), Positives = 260/381 (68%), Gaps = 9/381 (2%)

Query: 8   TGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHID 67
           TG V+++ LQ  SAY+L CY+T+W+QYR G G   PD +D  LCTH+IY+FA   N+ I 
Sbjct: 8   TGLVLILNLQLGSAYQLTCYFTNWAQYRPGLGRFMPDNIDPCLCTHLIYAFAGRQNNEIT 67

Query: 68  TWEWNDVTLYGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKSVPPFL 127
           T EWNDVTLY   N LKN+N  LKTLL++GGWNFG+  F+ + S  ++R+TFI SV  FL
Sbjct: 68  TIEWNDVTLYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFITSVIKFL 127

Query: 128 RTHGFDGLDLAWLYPGRR-----DKQHFTTLIKEMKAEFIKEA-QPGKKQLLLSAALSAG 181
           R + FDGLD  W YPG R     DK  FT L++EM+  F +EA Q  K +L+++AA++AG
Sbjct: 128 RQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAAG 187

Query: 182 KVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRFSNTDYAV 241
              I S Y+I ++SQ+LD+I +MTYD HG+W G TG +SPL++   D   + + N DY +
Sbjct: 188 ISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAYLNVDYVM 247

Query: 242 GYMLRLGAPASKLVMGIPTFGRSFTLAS-SETGVGAPISGPGIPGRFTKEAGTLAYYEIC 300
            Y    GAPA KL++G PT+G +F L++ S TG+GAP SG G  G + KE+G  AYYEIC
Sbjct: 248 NYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEIC 307

Query: 301 DFLR-GATVHRILGQQVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDF 359
            FL+ GAT      Q+VPYA +GN WVGYD+ +S   K Q+LK  +  GAMVWA+DLDDF
Sbjct: 308 TFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMVWAIDLDDF 367

Query: 360 QGSFCGQDLRFPLTNAIKDAL 380
            G+FC Q  +FPL + +K AL
Sbjct: 368 TGTFCNQG-KFPLISTLKKAL 387


>gi|68533260 chitinase 3-like 2 isoform c [Homo sapiens]
          Length = 311

 Score =  338 bits (867), Expect = 5e-93
 Identities = 160/310 (51%), Positives = 224/310 (72%), Gaps = 4/310 (1%)

Query: 76  LYGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKSVPPFLRTHGFDGL 135
           LY  +N+LK +NP LK LLS+GG+ FGS+ F  +  ++ SR  FI S+  FLR H FDGL
Sbjct: 2   LYQTINSLKTKNPKLKILLSIGGYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGL 61

Query: 136 DLAWLYPGRRDKQHFTTLIKEMKAEFIKE-AQPGKKQLLLSAALSAGKVTIDSSYDIAKI 194
           D++W+YP +++  HFT LI E+   F K+  +  K++LLL+A +SAG+  ID+SY + K+
Sbjct: 62  DVSWIYPDQKENTHFTVLIHELAEAFQKDFTKSTKERLLLTAGVSAGRQMIDNSYQVEKL 121

Query: 195 SQHLDFISIMTYDFHGAWRGT--TGHHSPLFRGQEDASPDRFSNTDYAVGYMLRLGAPAS 252
           ++ LDFI+++++DFHG+W     TGH+SPL +G +D  P  + N +YAVGY +  G P+ 
Sbjct: 122 AKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHKGMPSE 181

Query: 253 KLVMGIPTFGRSFTLASSETGVGAPISGPGIPGRFTKEAGTLAYYEICDFLRGATVHRIL 312
           K+VMGIPT+G SFTLAS+ET VGAP SGPG  G  T+ +G LAYYEIC FL+GA + R+ 
Sbjct: 182 KVVMGIPTYGHSFTLASAETTVGAPASGPGAAGPITESSGFLAYYEICQFLKGAKITRLQ 241

Query: 313 GQQVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQGSFCGQDLRFPL 372
            QQVPYA KGNQWVGYDD +S+++KVQ+LK+  L GAM+W++D+DDF G  C Q   +PL
Sbjct: 242 DQQVPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDFTGKSCNQG-PYPL 300

Query: 373 TNAIKDALAA 382
             A+K +L +
Sbjct: 301 VQAVKRSLGS 310


>gi|58386720 oviductal glycoprotein 1 precursor [Homo sapiens]
          Length = 678

 Score =  328 bits (841), Expect = 5e-90
 Identities = 177/380 (46%), Positives = 241/380 (63%), Gaps = 14/380 (3%)

Query: 9   GFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDT 68
           G V+++     +A+KLVCY+T+W+  R G  S  P  LD FLCTH+I++FA+++N+ I  
Sbjct: 9   GLVLVLKHHDGAAHKLVCYFTNWAHSRPGPASILPHDLDPFLCTHLIFAFASMNNNQIVA 68

Query: 69  WEWNDVT-LYGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKSVPPFL 127
            +  D   LY   N LK RN  LKTLLS+GGWNFG+ RF+ + S   +R  FI SV   L
Sbjct: 69  KDLQDEKILYPEFNKLKERNRELKTLLSIGGWNFGTSRFTTMLSTFANREKFIASVISLL 128

Query: 128 RTHGFDGLDLAWLYPGRR-----DKQHFTTLIKEMKAEFIKEAQ-PGKKQLLLSAALSAG 181
           RTH FDGLDL +LYPG R     D+  F  LI+E+   F KEA    + +LLLSAA+S  
Sbjct: 129 RTHDFDGLDLFFLYPGLRGSPMHDRWTFLFLIEELLFAFRKEALLTMRPRLLLSAAVSGV 188

Query: 182 KVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRFSNTDYAV 241
              + +SYD+  + + LDFI++++YD HG+W   TGH+SPLF   ED       ++ YA+
Sbjct: 189 PHIVQTSYDVRFLGRLLDFINVLSYDLHGSWERFTGHNSPLFSLPEDPK-----SSAYAM 243

Query: 242 GYMLRLGAPASKLVMGIPTFGRSFTLA-SSETGVGAPISGPGIPGRFTKEAGTLAYYEIC 300
            Y  +LGAP+ KL+MGIPT+GR+F L  +S+ G+ A   GP  PG++TK+ G LAY+EIC
Sbjct: 244 NYWRKLGAPSEKLIMGIPTYGRTFRLLKASKNGLQARAIGPASPGKYTKQEGFLAYFEIC 303

Query: 301 DFLRGATVHRILGQQVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQ 360
            F+ GA  H I  Q VPYA KG +WVGYD+  S   K  +++     GAMVW LD+DD +
Sbjct: 304 SFVWGAKKHWIDYQYVPYANKGKEWVGYDNAISFSYKAWFIRREHFGGAMVWTLDMDDVR 363

Query: 361 GSFCGQDLRFPLTNAIKDAL 380
           G+FCG    FPL   + D L
Sbjct: 364 GTFCGTG-PFPLVYVLNDIL 382


>gi|42542398 acidic chitinase isoform a [Homo sapiens]
          Length = 368

 Score =  266 bits (679), Expect = 3e-71
 Identities = 138/280 (49%), Positives = 187/280 (66%), Gaps = 9/280 (3%)

Query: 109 IASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRR-----DKQHFTTLIKEMKAEFIK 163
           + S  ++R+TFI SV  FLR + FDGLD  W YPG R     DK  FT L++EM+  F +
Sbjct: 1   MVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQ 60

Query: 164 EA-QPGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPL 222
           EA Q  K +L+++AA++AG   I S Y+I ++SQ+LD+I +MTYD HG+W G TG +SPL
Sbjct: 61  EAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPL 120

Query: 223 FRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTFGRSFTLAS-SETGVGAPISGP 281
           ++   D   + + N DY + Y    GAPA KL++G PT+G +F L++ S TG+GAP SG 
Sbjct: 121 YKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGA 180

Query: 282 GIPGRFTKEAGTLAYYEICDFLR-GATVHRILGQQVPYATKGNQWVGYDDQESVKSKVQY 340
           G  G + KE+G  AYYEIC FL+ GAT      Q+VPYA +GN WVGYD+ +S   K Q+
Sbjct: 181 GPAGPYAKESGIWAYYEICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQW 240

Query: 341 LKDRQLAGAMVWALDLDDFQGSFCGQDLRFPLTNAIKDAL 380
           LK  +  GAMVWA+DLDDF G+FC Q  +FPL + +K AL
Sbjct: 241 LKHNKFGGAMVWAIDLDDFTGTFCNQG-KFPLISTLKKAL 279


>gi|4758092 chitobiase, di-N-acetyl- [Homo sapiens]
          Length = 385

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 55/241 (22%), Positives = 87/241 (36%), Gaps = 64/241 (26%)

Query: 151 TTLIKEMKAEFIKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHG 210
           T L+KE    F +E +    Q+    A S   +     Y+   I+   DF+ +M+YD   
Sbjct: 157 TALVKETTDSFHREIEGS--QVTFDVAWSPKNID-RRCYNYTGIADACDFLFVMSYD--- 210

Query: 211 AWRGTTGHHSPLFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTFGRSFT-LAS 269
                    S ++     A+   ++ T       +++     KLVMG+P +G  +T L  
Sbjct: 211 -------EQSQIWSECIAAANAPYNQTLTGYNDYIKMSINPKKLVMGVPWYGYDYTCLNL 263

Query: 270 SETGVGAPISGPGIPGRFTKEAGTLAYYEICDFLRGATVHRILGQQVPYAT--------- 320
           SE  V      P                      RGA      G+QVPY T         
Sbjct: 264 SEDHVCTIAKVP---------------------FRGAPCSDAAGRQVPYKTIMKQINSSI 302

Query: 321 KGNQW--------------------VGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQ 360
            GN W                    V YD+ +S+  K  Y+++ +L G  +W  +  D+ 
Sbjct: 303 SGNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWNANCLDYS 362

Query: 361 G 361
           G
Sbjct: 363 G 363


>gi|110624787 5'-3' exoribonuclease 1 isoform b [Homo sapiens]
          Length = 1693

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 18/126 (14%)

Query: 162 IKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTT----G 217
           IK+A    + L   A   +  +T  + + +A++ +HL +   M      +W+G T    G
Sbjct: 112 IKKAIEKGETLPTEARFDSNCITPGTEF-MARLHEHLKYFVNMKISTDKSWQGVTIYFSG 170

Query: 218 HHSP--------LFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTFGRSFTLAS 269
           H +P         F   E A PD   NT + +      G  A  +++G+ +    F+L  
Sbjct: 171 HETPGEGEHKIMEFIRSEKAKPDHDPNTRHCL-----YGLDADLIMLGLTSHEAHFSLLR 225

Query: 270 SETGVG 275
            E   G
Sbjct: 226 EEVRFG 231


>gi|110624792 5'-3' exoribonuclease 1 isoform a [Homo sapiens]
          Length = 1706

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 18/126 (14%)

Query: 162 IKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTT----G 217
           IK+A    + L   A   +  +T  + + +A++ +HL +   M      +W+G T    G
Sbjct: 112 IKKAIEKGETLPTEARFDSNCITPGTEF-MARLHEHLKYFVNMKISTDKSWQGVTIYFSG 170

Query: 218 HHSP--------LFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTFGRSFTLAS 269
           H +P         F   E A PD   NT + +      G  A  +++G+ +    F+L  
Sbjct: 171 HETPGEGEHKIMEFIRSEKAKPDHDPNTRHCL-----YGLDADLIMLGLTSHEAHFSLLR 225

Query: 270 SETGVG 275
            E   G
Sbjct: 226 EEVRFG 231


>gi|62988276 mitochondrial RNase P protein 3 [Homo sapiens]
          Length = 583

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 102 GSQRFSKIASNTQSR-RTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAE 160
           G  ++ K       R   FIKS PPF      DGL++A ++P  R+ Q    ++ ++   
Sbjct: 379 GGDQYRKTTPQELKRFENFIKSRPPFDVV--IDGLNVAKMFPKVRESQLLLNVVSQLAKR 436

Query: 161 FIKEAQPGKKQLL 173
            ++    G+K +L
Sbjct: 437 NLRLLVLGRKHML 449


>gi|51230412 GTPase activating Rap/RanGAP domain-like 1 isoform 2
            [Homo sapiens]
          Length = 2083

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 4/99 (4%)

Query: 108  KIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKEAQP 167
            K+  NT  RR  +     FL TH ++ +    L+    D+    T+IK    +F     P
Sbjct: 1150 KLICNTMKRRQDVSPNRDFL-THFYNIMHCGLLHI---DQDIVNTIIKHCSPQFFSLGLP 1205

Query: 168  GKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTY 206
            G   L++   ++AG+V   +  +  ++   +   S++ +
Sbjct: 1206 GATMLIMDFIVAAGRVASSAFLNAPRVEAQVLLGSLVCF 1244


>gi|51226124 GTPase activating Rap/RanGAP domain-like 1 isoform 1
            [Homo sapiens]
          Length = 2036

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 4/99 (4%)

Query: 108  KIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAEFIKEAQP 167
            K+  NT  RR  +     FL TH ++ +    L+    D+    T+IK    +F     P
Sbjct: 1150 KLICNTMKRRQDVSPNRDFL-THFYNIMHCGLLHI---DQDIVNTIIKHCSPQFFSLGLP 1205

Query: 168  GKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTY 206
            G   L++   ++AG+V   +  +  ++   +   S++ +
Sbjct: 1206 GATMLIMDFIVAAGRVASSAFLNAPRVEAQVLLGSLVCF 1244


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,432,700
Number of Sequences: 37866
Number of extensions: 625832
Number of successful extensions: 1411
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1377
Number of HSP's gapped (non-prelim): 16
length of query: 383
length of database: 18,247,518
effective HSP length: 104
effective length of query: 279
effective length of database: 14,309,454
effective search space: 3992337666
effective search space used: 3992337666
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.