Guide to the Human Genome
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Name: ZNF460 Sequence: fasta or formatted (562aa) NCBI GI: 143771699
Description:

zinc finger protein 460

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         29           3
 C cysteine            5.0         28           1
 D aspartate           2.8         16           1
 E glutamate           9.4         53           2
 F phenylalanine       5.2         29           1
 G glycine             6.9         39           1
 H histidine           6.6         37           2
 I isoleucine          4.6         26           2
 K lysine              6.0         34           2
 L leucine             6.8         38           2
 M methionine          2.0         11           2
 N asparagine          3.2         18           1
 P proline             5.2         29           1
 Q glutamine           4.8         27           1
 R arginine            4.8         27           2
 S serine              7.3         41           3
 T threonine           6.2         35           2
 V valine              4.6         26           1
 W tryptophan          0.5          3           1
 Y tyrosine            2.8         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 460 
ZNF543                0.590   zinc finger protein 543 
ZNF805                0.559   zinc finger protein 805 isoform 1 
ZNF264                0.547   zinc finger protein 264 
ZNF805                0.471   zinc finger protein 805 isoform 2 
ZNF599                0.457   zinc finger protein 599 
ZNF135                0.385   zinc finger protein 135 
ZNF420                0.376   zinc finger protein 420 
ZNF184                0.368   zinc finger protein 184 
ZNF85                 0.367   zinc finger protein 85 
ZNF568                0.365   zinc finger protein 568 
ZNF66                 0.364   PREDICTED: zinc finger protein 66 
ZNF66                 0.364   PREDICTED: zinc finger protein 66 
ZNF66                 0.364   PREDICTED: zinc finger protein 66 
ZNF569                0.364   zinc finger protein 569 
ZNF98                 0.363   zinc finger protein 98 
ZNF665                0.363   zinc finger protein 665 
ZNF436                0.361   zinc finger protein 436 
ZNF436                0.361   zinc finger protein 436 
ZNF708                0.357   zinc finger protein 708 
ZNF93                 0.356   zinc finger protein 93 
ZNF167                0.355   zinc finger protein 167 isoform 1 
ZNF470                0.353   zinc finger protein 470 
ZNF16                 0.352   zinc finger protein 16 
ZNF16                 0.352   zinc finger protein 16 
ZNF30                 0.352   zinc finger protein 30 isoform b 
ZNF431                0.351   zinc finger protein 431 
ZNF347                0.351   zinc finger protein 347 
LOC100287429          0.350   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.350   PREDICTED: hypothetical protein XP_002343925 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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