C1orf198 3935

Name: C1orf198	Sequence: fasta or formatted (327aa)		NCBI GI: 14249478
Description: hypothetical protein LOC84886 isoform 1		Not currently referenced in the text
Other entries for this name: alt prot {289aa} hypothetical protein LOC84886 isoform 2 alt prot {197aa} hypothetical protein LOC84886 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 29 3 C cysteine 0.6 2 1 D aspartate 5.5 18 2 E glutamate 9.8 32 3 F phenylalanine 4.0 13 1 G glycine 5.5 18 1 H histidine 0.6 2 1 I isoleucine 2.8 9 2 K lysine 5.8 19 1 L leucine 6.7 22 1 M methionine 2.1 7 1 N asparagine 1.8 6 1 P proline 9.5 31 2 Q glutamine 6.1 20 2 R arginine 8.3 27 1 S serine 12.2 40 3 T threonine 3.7 12 1 V valine 3.7 12 2 W tryptophan 1.5 5 1 Y tyrosine 0.9 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC84886 isoform 1 C1orf198 0.887 hypothetical protein LOC84886 isoform 2 C1orf198 0.579 hypothetical protein LOC84886 isoform 3 STARD9 0.024 PREDICTED: StAR-related lipid transfer (START) doma... STARD9 0.024 PREDICTED: StAR-related lipid transfer (START) doma... CACNA1H 0.024 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1H 0.024 calcium channel, voltage-dependent, T type, alpha 1H... STARD9 0.024 PREDICTED: StAR-related lipid transfer (START) doma... FAM71E2 0.024 hypothetical protein LOC284418 MICAL3 0.024 microtubule associated monoxygenase, calponin and L... DPCR1 0.021 diffuse panbronchiolitis critical region 1 protein ... MAP1A 0.021 microtubule-associated protein 1A PHF23 0.019 PHD finger protein 23 TNRC18 0.019 trinucleotide repeat containing 18 PRDM2 0.019 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.019 retinoblastoma protein-binding zinc finger protein i... SFRS8 0.019 splicing factor, arginine/serine-rich 8 ZFHX3 0.019 AT-binding transcription factor 1 NOLC1 0.017 nucleolar and coiled-body phosphoprotein 1 CROCC 0.017 ciliary rootlet coiled-coil SRRM2 0.017 splicing coactivator subunit SRm300 TRIOBP 0.016 TRIO and F-actin binding protein isoform 6 C8orf33 0.016 hypothetical protein LOC65265 NAP1L3 0.016 nucleosome assembly protein 1-like 3 LRRC37A2 0.016 c114 SLIT-like testicular protein LRRC37A 0.016 leucine rich repeat containing 37A OBSCN 0.016 obscurin, cytoskeletal calmodulin and titin-interact... OBSCN 0.016 obscurin, cytoskeletal calmodulin and titin-interac... HUWE1 0.016 HECT, UBA and WWE domain containing 1 IWS1 0.016 IWS1 homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.