Guide to the Human Genome
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Name: PLCD4 Sequence: fasta or formatted (762aa) NCBI GI: 14249340
Description:

phospholipase C, delta 4

Referenced in:

Inositol Pathways
Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         32           2
 C cysteine            2.0         15           1
 D aspartate           5.9         45           1
 E glutamate           8.7         66           4
 F phenylalanine       4.6         35           1
 G glycine             5.6         43           2
 H histidine           2.6         20           1
 I isoleucine          3.9         30           1
 K lysine              5.1         39           4
 L leucine            11.8         90           3
 M methionine          2.8         21           1
 N asparagine          3.0         23           2
 P proline             3.9         30           1
 Q glutamine           7.3         56           3
 R arginine            5.0         38           2
 S serine              8.1         62           2
 T threonine           4.9         37           2
 V valine              5.6         43           2
 W tryptophan          1.6         12           1
 Y tyrosine            3.3         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase C, delta 4 
PLCD3                 0.452   phospholipase C delta 3 
PLCD1                 0.437   phospholipase C, delta 1 isoform 2 
PLCD1                 0.437   phospholipase C, delta 1 isoform 1 
PLCL2                 0.318   phospholipase C-like 2 isoform 1 
PLCL2                 0.318   phospholipase C-like 2 isoform 2 
PLCZ1                 0.316   phospholipase C, zeta 1 
PLCL1                 0.299   phospholipase C-like 1 isoform a 
PLCL1                 0.299   phospholipase C-like 1 isoform b 
PLCB4                 0.220   phospholipase C beta 4 isoform a 
PLCB4                 0.220   phospholipase C beta 4 isoform b 
PLCH2                 0.211   phospholipase C, eta 2 
PLCB1                 0.209   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.209   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB2                 0.206   phospholipase C, beta 2 
PLCH1                 0.205   phospholipase C eta 1 isoform c 
PLCH1                 0.205   phospholipase C eta 1 isoform a 
PLCH1                 0.205   phospholipase C eta 1 isoform b 
PLCB3                 0.197   phospholipase C beta 3 
PLCG1                 0.133   phospholipase C, gamma 1 isoform a 
PLCG1                 0.133   phospholipase C, gamma 1 isoform b 
PLCG2                 0.128   phospholipase C, gamma 2 
PLCE1                 0.100   phospholipase C, epsilon 1 
SYT7                  0.016   synaptotagmin VII 
SYT5                  0.015   synaptotagmin V 
SYT11                 0.014   synaptotagmin XI 
SYT2                  0.013   synaptotagmin II 
SYT2                  0.013   synaptotagmin II 
SYT1                  0.013   synaptotagmin I 
SYT1                  0.013   synaptotagmin I 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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