TUBB6 3875

Name: TUBB6	Sequence: fasta or formatted (446aa)		NCBI GI: 14210536
Description: tubulin, beta 6		Referenced in: Tubulins and Microtubules
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 30 2 C cysteine 1.8 8 1 D aspartate 5.8 26 1 E glutamate 7.8 35 4 F phenylalanine 5.6 25 2 G glycine 7.8 35 3 H histidine 2.2 10 1 I isoleucine 4.3 19 1 K lysine 3.1 14 1 L leucine 7.4 33 2 M methionine 4.3 19 2 N asparagine 4.7 21 2 P proline 4.7 21 2 Q glutamine 4.9 22 2 R arginine 4.9 22 2 S serine 6.5 29 3 T threonine 6.5 29 2 V valine 6.7 30 2 W tryptophan 0.9 4 1 Y tyrosine 3.1 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tubulin, beta 6 TUBB3 0.932 tubulin, beta, 4 TUBB4 0.920 tubulin, beta 4 TUBB2B 0.913 tubulin, beta 2B TUBB2C 0.913 tubulin, beta, 2 TUBB 0.910 tubulin, beta TUBB2A 0.910 tubulin, beta 2 TUBB8 0.862 tubulin, beta 8 TUBB4Q 0.792 tubulin, beta polypeptide 4, member Q TUBB1 0.790 beta tubulin 1, class VI LOC100130736 0.415 PREDICTED: similar to tubulin, beta 5 LOC100130736 0.415 PREDICTED: similar to tubulin, beta 5 TUBA1B 0.398 tubulin, alpha, ubiquitous TUBA1C 0.397 tubulin alpha 6 TUBA4A 0.397 tubulin, alpha 4a TUBA1A 0.394 tubulin, alpha 1a TUBA3D 0.391 tubulin, alpha 3d TUBA3C 0.391 tubulin, alpha 3c TUBA8 0.384 tubulin, alpha 8 TUBA3E 0.382 tubulin, alpha 3e TUBAL3 0.363 tubulin, alpha-like 3 TUBG1 0.298 tubulin, gamma 1 TUBG2 0.295 tubulin, gamma 2 TUBE1 0.262 tubulin, epsilon 1 LOC442434 0.173 PREDICTED: similar to hCG1784562 LOC442434 0.173 PREDICTED: similar to hCG1784562 LOC442434 0.173 PREDICTED: similar to hCG1784562 LOC100130736 0.149 PREDICTED: similar to hCG1647990 TUBD1 0.127 delta-tubulin LOC100292044 0.080 PREDICTED: similar to hCG1642465 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.