Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 94538320

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|94538320 hydroxyacylglutathione hydrolase isoform 2 [Homo
sapiens]
         (260 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|94538320 hydroxyacylglutathione hydrolase isoform 2 [Homo sap...   539   e-153
gi|94538322 hydroxyacylglutathione hydrolase isoform 1 [Homo sap...   539   e-153
gi|14150041 hydroxyacylglutathione hydrolase-like isoform 2 [Hom...   271   3e-73
gi|46361987 hydroxyacylglutathione hydrolase-like isoform 1 [Hom...   229   2e-60
gi|21703352 myofibrillogenesis regulator 1 isoform 2 [Homo sapiens]   195   4e-50
gi|116642887 myofibrillogenesis regulator 1 isoform 1 [Homo sapi...   195   4e-50
gi|41327741 ETHE1 protein [Homo sapiens]                               69   3e-12
gi|7705793 lactamase, beta 2 [Homo sapiens]                            37   0.017
gi|29789060 hypothetical protein LOC9847 [Homo sapiens]                31   1.2  
gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [H...    30   2.1  
gi|5901962 MYST histone acetyltransferase 2 [Homo sapiens]             28   8.0  

>gi|94538320 hydroxyacylglutathione hydrolase isoform 2 [Homo
           sapiens]
          Length = 260

 Score =  539 bits (1388), Expect = e-153
 Identities = 260/260 (100%), Positives = 260/260 (100%)

Query: 1   MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA 60
           MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA
Sbjct: 1   MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA 60

Query: 61  GGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVS 120
           GGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVS
Sbjct: 61  GGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVS 120

Query: 121 KPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNL 180
           KPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNL
Sbjct: 121 KPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNL 180

Query: 181 KFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETD 240
           KFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETD
Sbjct: 181 KFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETD 240

Query: 241 PVTTMRAVRREKDQFKMPRD 260
           PVTTMRAVRREKDQFKMPRD
Sbjct: 241 PVTTMRAVRREKDQFKMPRD 260


>gi|94538322 hydroxyacylglutathione hydrolase isoform 1 [Homo
           sapiens]
          Length = 308

 Score =  539 bits (1388), Expect = e-153
 Identities = 260/260 (100%), Positives = 260/260 (100%)

Query: 1   MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA 60
           MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA
Sbjct: 49  MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA 108

Query: 61  GGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVS 120
           GGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVS
Sbjct: 109 GGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVS 168

Query: 121 KPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNL 180
           KPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNL
Sbjct: 169 KPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNL 228

Query: 181 KFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETD 240
           KFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETD
Sbjct: 229 KFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETD 288

Query: 241 PVTTMRAVRREKDQFKMPRD 260
           PVTTMRAVRREKDQFKMPRD
Sbjct: 289 PVTTMRAVRREKDQFKMPRD 308


>gi|14150041 hydroxyacylglutathione hydrolase-like isoform 2 [Homo
           sapiens]
          Length = 282

 Score =  271 bits (694), Expect = 3e-73
 Identities = 128/256 (50%), Positives = 184/256 (71%), Gaps = 1/256 (0%)

Query: 1   MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA 60
           MKV+V+P L DNYMYLVI++ T+EA  VD   P+++++   + GV LT VLTTHHHWDHA
Sbjct: 1   MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHA 60

Query: 61  GGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVS 120
            GN +L +L  GL V G D+RI +LT ++ H   L+ G+++V+CL TP HT+GH+ YF+ 
Sbjct: 61  RGNPELARLRPGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLW 120

Query: 121 KPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNL 180
           +    +PPA+F+GD L VAGCG   EG+A +M ++L E LG LPP+T+V+CGHE+T++NL
Sbjct: 121 EDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAE-LGTLPPETKVFCGHEHTLSNL 179

Query: 181 KFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETD 240
           +FA+ VEP N  +R KL+WAK++     PTVPSTL EE  YNPF+RV E+ V++  G+  
Sbjct: 180 EFAQKVEPCNDHVRAKLSWAKKRDEDDVPTVPSTLGEERLYNPFLRVAEEPVRKFTGKAV 239

Query: 241 PVTTMRAVRREKDQFK 256
           P   + A+ +E+ +F+
Sbjct: 240 PADVLEALCKERARFE 255


>gi|46361987 hydroxyacylglutathione hydrolase-like isoform 1 [Homo
           sapiens]
          Length = 290

 Score =  229 bits (584), Expect = 2e-60
 Identities = 106/203 (52%), Positives = 150/203 (73%), Gaps = 1/203 (0%)

Query: 1   MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA 60
           MKV+V+P L DNYMYLVI++ T+EA  VD   P+++++   + GV LT VLTTHHHWDHA
Sbjct: 1   MKVKVIPVLEDNYMYLVIEELTREAVAVDVAVPKRLLEIVGREGVSLTAVLTTHHHWDHA 60

Query: 61  GGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVS 120
            GN +L +L  GL V G D+RI +LT ++ H   L+ G+++V+CL TP HT+GH+ YF+ 
Sbjct: 61  RGNPELARLRPGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLW 120

Query: 121 KPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNL 180
           +    +PPA+F+GD L VAGCG   EG+A +M ++L E LG LPP+T+V+CGHE+T++NL
Sbjct: 121 EDDCPDPPALFSGDALSVAGCGSCLEGSAQQMYQSLAE-LGTLPPETKVFCGHEHTLSNL 179

Query: 181 KFARHVEPGNAAIREKLAWAKEK 203
           +FA+ VEP N  +R KL+WAK +
Sbjct: 180 EFAQKVEPCNDHVRAKLSWAKAR 202


>gi|21703352 myofibrillogenesis regulator 1 isoform 2 [Homo sapiens]
          Length = 361

 Score =  195 bits (495), Expect = 4e-50
 Identities = 102/238 (42%), Positives = 138/238 (57%), Gaps = 2/238 (0%)

Query: 1   MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA 60
           +KV  +P L+DNY YL+ID + + A  VDP  P+ V  +  K GV L  +L TH HWDH+
Sbjct: 95  VKVLPIPVLSDNYSYLIIDTQAQLAVAVDPSDPRAVQASIEKEGVTLVAILCTHKHWDHS 154

Query: 61  GGNEKLVKLESGLKVYGG-DDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFV 119
           GGN  L +     +VYG   D I  LTH + H   + VG L ++ LATP HT GH+ Y +
Sbjct: 155 GGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYLL 214

Query: 120 SKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINN 179
                  P  +F+GD LF++GCG+ +EG A+ M  +L  VLG L  DT ++ GHEY   N
Sbjct: 215 DGEPYKGPSCLFSGDLLFLSGCGRTFEGNAETMLSSLDTVLG-LGDDTLLWPGHEYAEEN 273

Query: 180 LKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAG 237
           L FA  VEP N A   K+ W + +    + T PSTL EE +YNPF+R     +Q+  G
Sbjct: 274 LGFAGVVEPENLARERKMQWVQRQRLERKGTCPSTLGEERSYNPFLRTHCLALQEALG 331


>gi|116642887 myofibrillogenesis regulator 1 isoform 1 [Homo
           sapiens]
          Length = 385

 Score =  195 bits (495), Expect = 4e-50
 Identities = 102/238 (42%), Positives = 138/238 (57%), Gaps = 2/238 (0%)

Query: 1   MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHA 60
           +KV  +P L+DNY YL+ID + + A  VDP  P+ V  +  K GV L  +L TH HWDH+
Sbjct: 119 VKVLPIPVLSDNYSYLIIDTQAQLAVAVDPSDPRAVQASIEKEGVTLVAILCTHKHWDHS 178

Query: 61  GGNEKLVKLESGLKVYGG-DDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFV 119
           GGN  L +     +VYG   D I  LTH + H   + VG L ++ LATP HT GH+ Y +
Sbjct: 179 GGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYLL 238

Query: 120 SKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINN 179
                  P  +F+GD LF++GCG+ +EG A+ M  +L  VLG L  DT ++ GHEY   N
Sbjct: 239 DGEPYKGPSCLFSGDLLFLSGCGRTFEGNAETMLSSLDTVLG-LGDDTLLWPGHEYAEEN 297

Query: 180 LKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAG 237
           L FA  VEP N A   K+ W + +    + T PSTL EE +YNPF+R     +Q+  G
Sbjct: 298 LGFAGVVEPENLARERKMQWVQRQRLERKGTCPSTLGEERSYNPFLRTHCLALQEALG 355


>gi|41327741 ETHE1 protein [Homo sapiens]
          Length = 254

 Score = 69.3 bits (168), Expect = 3e-12
 Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 12/183 (6%)

Query: 13  YMYLVIDDETKEAAIVDPVQPQKVVDA--ARKHGVKLTTVLTTHHHWDHAGGNEKLVKLE 70
           + YL+ D E++EA ++DPV      DA   ++ G++L   + TH H DH  G+  L  L 
Sbjct: 36  FTYLLGDRESREAVLIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLL 95

Query: 71  SGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAV 130
            G +              I    +++ G   ++  A+P HT G + + +     ++    
Sbjct: 96  PGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVL-----NDHSMA 150

Query: 131 FTGDTLFVAGCGK--FYEGTADEMCKALLEVLGRLPPDTRVYCGHEY---TINNLKFARH 185
           FTGD L + GCG+  F +G A  +  ++ E +  LP D  +Y  H+Y   T++ ++  R 
Sbjct: 151 FTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERT 210

Query: 186 VEP 188
           + P
Sbjct: 211 LNP 213


>gi|7705793 lactamase, beta 2 [Homo sapiens]
          Length = 288

 Score = 37.0 bits (84), Expect = 0.017
 Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 29/200 (14%)

Query: 21  ETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVY---- 76
           +T E AI + +   K   A  +    +  ++ TH H DH+GG   + K  +    Y    
Sbjct: 46  DTGEPAIPEYISCLK--QALTEFNTAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKK 103

Query: 77  -----GGDDRIGALTHKITHL---STLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPP 128
                  ++ IG    +  +L     ++     ++ L TP HT  H+   +      E  
Sbjct: 104 LPRNPQREEIIGNGEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLL-----EEEN 158

Query: 129 AVFTGDTLFVAGCGKFYEGTADEM--CKALLEVLGRLPPDTRVYCGHEYTINN--LKFAR 184
           A+F+GD +   G   F E   D M   K LL++   +     +Y GH   I+N   K  +
Sbjct: 159 AIFSGDCILGEGTTVF-EDLYDYMNSLKELLKIKADI-----IYPGHGPVIHNAEAKIQQ 212

Query: 185 HVEPGNAAIREKLAWAKEKY 204
           ++   N   ++ L   +E +
Sbjct: 213 YISHRNIREQQILTLFRENF 232


>gi|29789060 hypothetical protein LOC9847 [Homo sapiens]
          Length = 1000

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 6/87 (6%)

Query: 176 TINNLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPF--MRVREKTVQ 233
           T N+  + +H+      I + +A  KE Y I  P +    +EE   +P    R R + ++
Sbjct: 601 TPNDGSYEQHISHMQKKINDTIAKNKELYEINPPEI----SEEIIGSPIPEPRQRSRLLR 656

Query: 234 QHAGETDPVTTMRAVRREKDQFKMPRD 260
             +  +D VT +     +KD F +  D
Sbjct: 657 SQSESSDEVTELDLSHGKKDAFVLEID 683


>gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [Homo
           sapiens]
          Length = 691

 Score = 30.0 bits (66), Expect = 2.1
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 180 LKFARHV-EPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGE 238
           L +A+ + E   A  R+ L   KE+  + +P     L E FTY     +++K + QH  +
Sbjct: 106 LNYAKQLKERLEAFTRDFLPHMKEEEEVFQPM----LMEYFTYEELKDIKKKVIAQHCSQ 161

Query: 239 TDPVTTMRAV 248
            D    +R +
Sbjct: 162 KDTAELLRGL 171


>gi|5901962 MYST histone acetyltransferase 2 [Homo sapiens]
          Length = 611

 Score = 28.1 bits (61), Expect = 8.0
 Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 23/147 (15%)

Query: 63  NEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKP 122
           +++ +  +  LK  G D     L+H+       +  + N+KC    C++ GH+       
Sbjct: 149 HDESIAKDMSLKDSGSD-----LSHRPKRRRFHESYNFNMKCPTPGCNSLGHL------T 197

Query: 123 GGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNLKF 182
           G  E           ++GC  ++  +ADE CK   +   +   +  +   H    NN   
Sbjct: 198 GKHE-------RHFSISGCPLYHNLSADE-CKVRAQSRDKQIEERML--SHRQDDNNRHA 247

Query: 183 ARHVEPGNAAIR--EKLAWAKEKYSIG 207
            RH  P    +R  EK+A  ++K + G
Sbjct: 248 TRHQAPTERQLRYKEKVAELRKKRNSG 274


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,681,464
Number of Sequences: 37866
Number of extensions: 475749
Number of successful extensions: 911
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 896
Number of HSP's gapped (non-prelim): 11
length of query: 260
length of database: 18,247,518
effective HSP length: 100
effective length of query: 160
effective length of database: 14,460,918
effective search space: 2313746880
effective search space used: 2313746880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press