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Search of human proteins with 93102375
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|93102375 hypothetical protein LOC10827 [Homo sapiens]
(505 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|93102375 hypothetical protein LOC10827 [Homo sapiens] 976 0.0
gi|29789373 hypothetical protein LOC92689 [Homo sapiens] 371 e-103
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 46 7e-05
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 42 0.002
gi|71061468 centromere protein E [Homo sapiens] 42 0.002
gi|224458301 family with sequence similarity 186, member A [Homo... 40 0.004
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 40 0.004
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 40 0.004
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 40 0.004
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 40 0.004
gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens] 40 0.004
gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens] 40 0.004
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 40 0.004
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 40 0.004
gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens] 40 0.005
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 40 0.005
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 40 0.005
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 40 0.005
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 40 0.005
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 40 0.005
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 40 0.005
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 40 0.006
gi|94680976 coiled-coil domain containing 112 isoform 1 [Homo sa... 40 0.006
gi|145580595 coiled-coil domain containing 112 isoform 2 [Homo s... 40 0.006
gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo s... 40 0.006
gi|223555975 tropomyosin 4 isoform 1 [Homo sapiens] 39 0.011
gi|4507651 tropomyosin 4 isoform 2 [Homo sapiens] 39 0.011
gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens] 39 0.011
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 39 0.014
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 39 0.014
>gi|93102375 hypothetical protein LOC10827 [Homo sapiens]
Length = 505
Score = 976 bits (2524), Expect = 0.0
Identities = 505/505 (100%), Positives = 505/505 (100%)
Query: 1 MSDKDDIETPLLTEAAPILEDGNCEPAKNSESVDQGAKPESKSEPVVSTRKRPETKPSSD 60
MSDKDDIETPLLTEAAPILEDGNCEPAKNSESVDQGAKPESKSEPVVSTRKRPETKPSSD
Sbjct: 1 MSDKDDIETPLLTEAAPILEDGNCEPAKNSESVDQGAKPESKSEPVVSTRKRPETKPSSD 60
Query: 61 LETSKVLPIQDNVSKDVPQTRWGYWGSWGKSILSSASATVATVGQGISNVIEKAETSLGI 120
LETSKVLPIQDNVSKDVPQTRWGYWGSWGKSILSSASATVATVGQGISNVIEKAETSLGI
Sbjct: 61 LETSKVLPIQDNVSKDVPQTRWGYWGSWGKSILSSASATVATVGQGISNVIEKAETSLGI 120
Query: 121 PGPSEISTEVKYVAGETNAKENENSSPVAGAFGVFSTISTAVQSTGKSVISGGLDALEFI 180
PGPSEISTEVKYVAGETNAKENENSSPVAGAFGVFSTISTAVQSTGKSVISGGLDALEFI
Sbjct: 121 PGPSEISTEVKYVAGETNAKENENSSPVAGAFGVFSTISTAVQSTGKSVISGGLDALEFI 180
Query: 181 GKKTMDVIAEGDPGFKRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLL 240
GKKTMDVIAEGDPGFKRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLL
Sbjct: 181 GKKTMDVIAEGDPGFKRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLL 240
Query: 241 FDEFQGLSHLEALEMLSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEE 300
FDEFQGLSHLEALEMLSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEE
Sbjct: 241 FDEFQGLSHLEALEMLSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEE 300
Query: 301 EEKKGDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEA 360
EEKKGDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEA
Sbjct: 301 EEKKGDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEA 360
Query: 361 ENTEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQM 420
ENTEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQM
Sbjct: 361 ENTEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQM 420
Query: 421 TIVLCKELSSLSKEFTTCLTTAGVKEMADVLNPLITAVFLEASNSASYIQDAFQLLLPVL 480
TIVLCKELSSLSKEFTTCLTTAGVKEMADVLNPLITAVFLEASNSASYIQDAFQLLLPVL
Sbjct: 421 TIVLCKELSSLSKEFTTCLTTAGVKEMADVLNPLITAVFLEASNSASYIQDAFQLLLPVL 480
Query: 481 EISLIENKIESHRHELQGQKPLLEH 505
EISLIENKIESHRHELQGQKPLLEH
Sbjct: 481 EISLIENKIESHRHELQGQKPLLEH 505
>gi|29789373 hypothetical protein LOC92689 [Homo sapiens]
Length = 563
Score = 371 bits (953), Expect = e-103
Identities = 211/462 (45%), Positives = 300/462 (64%), Gaps = 38/462 (8%)
Query: 58 SSDLETSKVLPIQDN--VSKDVPQTR--WGYWGSWGKSILSSASATVATVGQGISNVIEK 113
S + E +P+Q+ + D P + W WGSWGKS+LSSASATV G G++ V EK
Sbjct: 99 SLEAEPRSEIPLQEQNYPAVDSPPSGGGWAGWGSWGKSLLSSASATV---GHGLTAVKEK 155
Query: 114 AETSLGIPGPSEISTE------------VKYVAGETNAKENENSSPVAGAFGVFSTISTA 161
A +L I G + S+E + A + E+ +SP + + G+ S I+
Sbjct: 156 AGATLRIHGVNSGSSEGAQPNTENGVPEITDAATDQGPAESPPTSPSSASRGMLSAITNV 215
Query: 162 VQSTGKSVISGGLDALEFIGKKTMDVIAEGDPGFKRTKGLMNRNATLSQVLREAKEKEEI 221
VQ+TGKSV++GGLDALEFIGKKTM+V+AE DPGFKRTK LM R +LSQ+LREAKEKE+
Sbjct: 216 VQNTGKSVLTGGLDALEFIGKKTMNVLAESDPGFKRTKTLMERTVSLSQMLREAKEKEKQ 275
Query: 222 RTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLSQESEIKVKSILNSLSGEELETLKV 281
R + ++T+E + HYG+LFDE+QGLSHLEALE+LS ESE KV+S L SL GE+LE LK
Sbjct: 276 RLAQQLTME--RTAHYGMLFDEYQGLSHLEALEILSNESESKVQSFLASLDGEKLELLKN 333
Query: 282 ELEQLKETFSLAEFCEEEEEEKKG----DEDFTKDITELFSQLHVSSKPEKLARARNTAH 337
+L +K+ F+ E EE +E++G E+F + +TEL +LHV++ P+KL +A AH
Sbjct: 334 DLISIKDIFAAKELENEENQEEQGLEEKGEEFARMLTELLFELHVAATPDKLNKAMKRAH 393
Query: 338 EWIRKSLT-------------KPLAENEEGEKQSEAENTEQVNKNSIEDIHAFAIRSLAE 384
+W+ + T E EE + + + E+ +IE+++ +I SLAE
Sbjct: 394 DWVEEDQTVVSVDVAKVSEEETKKEEKEEKSQDPQEDKKEEKKTKTIEEVYMSSIESLAE 453
Query: 385 LTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQMTIVLCKELSSLSKEFTTCLTTAGV 444
+TA IE HK A L+LHG+++E A ++++ L ++T +C E++SLSK+FT LTT G
Sbjct: 454 VTARCIEQLHKVAELILHGQEEEKPAQDQAKVLIKLTTAMCNEVASLSKKFTNSLTTVGS 513
Query: 445 KEMADVLNPLITAVFLEASNSASYIQDAFQLLLPVLEISLIE 486
+ A+VLNP+I++V LE NS +YIQDAFQLLLPVL++S I+
Sbjct: 514 NKKAEVLNPMISSVLLEGCNSTTYIQDAFQLLLPVLQVSHIQ 555
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 46.2 bits (108), Expect = 7e-05
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 263 KVKSILNSLSGE-ELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITELFSQLH 321
K+K +L S E E+ T+K + E+ KE + +E +E EEK ++ +L QL
Sbjct: 839 KIKPLLKSAEAEKEMATMKEDFERTKEELARSEARRKELEEKM--VSLLQEKNDL--QLQ 894
Query: 322 VSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEAE--NTEQV-NKNSIEDIHAFA 378
V S+ E L A I+ + E E+ E E N+E V K ++ED +
Sbjct: 895 VQSETENLMDAEERCEGLIKSKILLEAKVKELTERLEEEEEMNSELVAKKRNLEDKCSSL 954
Query: 379 IRSL--AELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQMTIVLCKELSSLSKEFT 436
R + ELT +E + +E+TA+E + +S++T KE SL +
Sbjct: 955 KRDIDDLELTLTKVEKEKHATENKVKNLSEEMTALE--ENISKLT----KEKKSLQEAHQ 1008
Query: 437 TCLTTAGVKEMADVLNPLI 455
L V+E D +N LI
Sbjct: 1009 QTLDDLQVEE--DKVNGLI 1025
Score = 30.8 bits (68), Expect = 3.0
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 39/155 (25%)
Query: 224 SNEVTVETDK--KTHYGLLFDEFQGLSHLEALEMLSQESEIKVKSIL----NSLSGEELE 277
SN ET K +T G L D S L + L ++K + + N L EELE
Sbjct: 1636 SNRQMAETQKHLRTVQGQLKD-----SQLHLDDALRSNEDLKEQLAIVERRNGLLLEELE 1690
Query: 278 TLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITELFSQLHVSSKPEKLARARNTAH 337
+KV LEQ + T L+E +L +S +L ++NT+
Sbjct: 1691 EMKVALEQTERTRRLSE-----------------------QELLDASDRVQLLHSQNTSL 1727
Query: 338 EWIRKSLTKPLAENEEGEKQSEAENTEQVNKNSIE 372
+K L +A + Q+E EN+ Q ++N+ E
Sbjct: 1728 INTKKKLEADIA-----QCQAEVENSIQESRNAEE 1757
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 41.6 bits (96), Expect = 0.002
Identities = 63/245 (25%), Positives = 97/245 (39%), Gaps = 52/245 (21%)
Query: 263 KVKSILNSLS-GEELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITELFSQLH 321
K+K ++ S GEE+ LK E QL++ +EF + EE K T++ +L QL
Sbjct: 847 KIKPLVKSSEVGEEVAGLKEECAQLQKALEKSEF--QREELKAKQVSLTQEKNDLILQL- 903
Query: 322 VSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEAENTEQVNKNSIEDIHAFAIRS 381
++ E LA EW+ KS K E E E E++N
Sbjct: 904 -QAEQETLANVEEQC-EWLIKS--KIQLEARVKELSERVEEEEEIN-------------- 945
Query: 382 LAELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQMTIVLCKELSSLSKEFTTCLTT 441
+ELTA GRK E E + + + +L K S ++ TT
Sbjct: 946 -SELTA--------------RGRKLEDECFELKKEIDDLETMLVK---SEKEKRTTEHKV 987
Query: 442 AGVKEMADVLNPLITAVFLEASNSASYIQDAFQLLLPVL--------EISLIENKIESHR 493
+ E + LN I+ + + +A +Q+A Q L L +S K+E
Sbjct: 988 KNLTEEVEFLNEDIS----KLNRAAKVVQEAHQQTLDDLHMEEEKLSSLSKANLKLEQQV 1043
Query: 494 HELQG 498
EL+G
Sbjct: 1044 DELEG 1048
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 41.6 bits (96), Expect = 0.002
Identities = 76/313 (24%), Positives = 131/313 (41%), Gaps = 40/313 (12%)
Query: 201 LMNRNATLSQVLREAK---EKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLS 257
L NR++TL V RE EK + +T EV T +K D+ + L +E
Sbjct: 896 LENRDSTLQTVEREKTLITEKLQ-QTLEEVKTLTQEK-------DDLKQLQESLQIERDQ 947
Query: 258 QESEIKVKSILNSLSGEELETLKVELEQLKETFS-LAEFCEEEEEEKKGDEDFTKDITEL 316
+S+I +N + E+L L+Q +ET + L EE E+ T + +
Sbjct: 948 LKSDIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDE 1007
Query: 317 FSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEAENTEQVNKNSIEDIHA 376
F Q V ++ A+NT ++LT + +NE E+Q + + Q KN ++ +
Sbjct: 1008 FQQKMVGIDKKQDLEAKNT------QTLTADVKDNEIIEQQRKIFSLIQ-EKNELQQMLE 1060
Query: 377 FAIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQMTIVLCKELSSLSKEFT 436
I +L E T QE + + Q IV ++ ++ KE
Sbjct: 1061 SVIAEKEQLKTDLKENIEMTI------ENQEELRLLGDELKKQQEIVAQEKNHAIKKEGE 1114
Query: 437 TCLTTAGVKEMADVLNPLITAVFLEASNSASYIQDAFQLLLPVLE-ISLIE---NKIESH 492
T + E+ + L + +Q+ Q LL V E +S ++ N+IE+
Sbjct: 1115 LSRTCDRLAEVEEKLK-----------EKSQQLQEKQQQLLNVQEEMSEMQKKINEIENL 1163
Query: 493 RHELQGQKPLLEH 505
++EL+ ++ LEH
Sbjct: 1164 KNELKNKELTLEH 1176
Score = 33.1 bits (74), Expect = 0.61
Identities = 62/304 (20%), Positives = 128/304 (42%), Gaps = 31/304 (10%)
Query: 208 LSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLSQESEIKVKSI 267
L+ L+E++E+ +I + E K+ L + Q + + + +ES+ K
Sbjct: 1574 LTNRLQESQEEIQIMIKEK---EEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQF 1630
Query: 268 LNSLSGEELETLKVELEQLKETFSLAEFCEE--EEEEKKGDEDFTKDITELFS----QLH 321
L + E + E+E LKE F + E E E + + +++ E+ S +
Sbjct: 1631 LKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDD 1690
Query: 322 VSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEAENTE---QVNKNSIEDIHAFA 378
+ S E L R+ E +R+++T+ L EKQ E + + ++ +I+ +
Sbjct: 1691 LRSVEETLKVERDQLKENLRETITRDL------EKQEELKIVHMHLKEHQETIDKLRGIV 1744
Query: 379 IRSLAELTACSIELFHKTAALVLHGRK-QEVTAI------ERSQTLSQMTIVLCKELSSL 431
E++ +L H AL K QE I E+ +T+ ++ ++ ++ L
Sbjct: 1745 SEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKL 1804
Query: 432 SK-----EFTTCLTTAGVKEMADVLNPLITAVFLEASNSASYIQDAFQLLLPVLEISLIE 486
S E + ++E+ + LIT + + + + + + QL + + SL
Sbjct: 1805 SNMQKDLENSNAKLQEKIQELKANEHQLIT-LKKDVNETQKKVSEMEQLKKQIKDQSLTL 1863
Query: 487 NKIE 490
+K+E
Sbjct: 1864 SKLE 1867
Score = 30.8 bits (68), Expect = 3.0
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 199 KGLMNRNATLSQVLREAKEKE-EIRTSNEVTVETDKKTHY-----GLLFDEFQGLSHLEA 252
K L N NA L + ++E K E ++ T + ET KK + D+ LS LE
Sbjct: 1809 KDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEI 1868
Query: 253 ----LEMLSQESEIKVKSILNSLSGEEL--ETLKVELEQLKETFSLAEFCE-EEEEEKKG 305
L E+ ++KS++ ETLK+E +QLKE+ + + E ++E K
Sbjct: 1869 ENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKT 1928
Query: 306 DEDFTKDITELFSQLH--VSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQ 357
+K+ E +L +S K +++ + + + L K + E ++ E Q
Sbjct: 1929 ARMLSKEHKETVDKLREKISEKTIQISDIQKDLDK-SKDELQKKIQELQKKELQ 1981
>gi|224458301 family with sequence similarity 186, member A [Homo
sapiens]
Length = 2351
Score = 40.4 bits (93), Expect = 0.004
Identities = 70/332 (21%), Positives = 138/332 (41%), Gaps = 50/332 (15%)
Query: 80 TRWGYWGSWGKSILSSASATVATVGQGISNVIEKAETSLGIPGPSEISTEVKYVAGETNA 139
+R W SW + ++ S A + + ++ T+ + SEI ++ + G T
Sbjct: 196 SRGTLWKSWKERVIKRPSTARALRPDQM--ISDQLATNTKV---SEIQGMLQELIGTTMF 250
Query: 140 KENENSSPVAGAFGVFSTISTAVQSTGKSVISGGLDALEFIGKKTMDVIAEGDPGFKRTK 199
EN++ + +STA+ + + +T + AE + K +
Sbjct: 251 STLENNA-IKYISSTIVNLSTALSMLNDELKCVNFQSSTVYAHETSE--AEKELSLKIIR 307
Query: 200 GLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLSQE 259
L N N L Q L++A+EK E +++ +E L+ + S L+ L S +
Sbjct: 308 DLSNENEMLQQKLQDAEEKCEQLIRSKIVIEQ--------LYAKLSTSSTLKVLPGPSPQ 359
Query: 260 SE---IKV---KSILNSLSGEELETLKVELE-------------------QLKETFSLAE 294
S IKV + ++++ +ELE + E++ Q + T L E
Sbjct: 360 SSRAIIKVGDTEDNMDNILDKELENIVDEVQRKETKDSGIKWDSTISYTAQAERTPDLTE 419
Query: 295 FCEEEEEEKKGDEDFTKDITEL----FSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAE 350
++ + ED TKD L F Q + + + R+ A ++ ++ L++
Sbjct: 420 LRQQPVASEDISEDSTKDNVSLKKGDFYQEDETDEYQSWKRSHKKA-TYVYETSGPNLSD 478
Query: 351 NEEGEKQSEAENTE----QVNKNSIEDIHAFA 378
N+ G+K SEA+ ++ QV K +++ +F+
Sbjct: 479 NKSGQKVSEAKPSQYYELQVLKKKRKEMKSFS 510
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 40.4 bits (93), Expect = 0.004
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 205 NATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLS----QES 260
N T LRE++E E SN + DK+T + +S L E S +
Sbjct: 807 NVTEDSDLRESEELECNTGSNITNMHQDKETSDAFHSATYTTISQLPDTETHSISKAKAD 866
Query: 261 EIKVKSILNSLSGEEL-----ETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITE 315
+++ + +S S +E ET E TF + C+ +E+EK+ + + T+
Sbjct: 867 TLRIIRLSHSASKQEKLPDEKETQNAEYIDKSCTFKKPQQCDRKEQEKEANSELTQGFR- 925
Query: 316 LFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEAENTEQVNKNS 370
FS +H+ KP+ + E I +K A N+E E Q + +T+ + +NS
Sbjct: 926 -FS-IHLKQKPKYV----KFQMEQISSGSSK--APNKEQEVQPQTLSTQTILENS 972
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo
sapiens]
Length = 6929
Score = 40.4 bits (93), Expect = 0.004
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 205 NATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLS----QES 260
N T LRE++E E SN + DK+T + +S L E S +
Sbjct: 736 NVTEDSDLRESEELECNTGSNITNMHQDKETSDAFHSATYTTISQLPDTETHSISKAKAD 795
Query: 261 EIKVKSILNSLSGEEL-----ETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITE 315
+++ + +S S +E ET E TF + C+ +E+EK+ + + T+
Sbjct: 796 TLRIIRLSHSASKQEKLPDEKETQNAEYIDKSCTFKKPQQCDRKEQEKEANSELTQGFR- 854
Query: 316 LFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEAENTEQVNKNS 370
FS +H+ KP+ + E I +K A N+E E Q + +T+ + +NS
Sbjct: 855 -FS-IHLKQKPKYV----KFQMEQISSGSSK--APNKEQEVQPQTLSTQTILENS 901
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo
sapiens]
Length = 6929
Score = 40.4 bits (93), Expect = 0.004
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 205 NATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLS----QES 260
N T LRE++E E SN + DK+T + +S L E S +
Sbjct: 736 NVTEDSDLRESEELECNTGSNITNMHQDKETSDAFHSATYTTISQLPDTETHSISKAKAD 795
Query: 261 EIKVKSILNSLSGEEL-----ETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITE 315
+++ + +S S +E ET E TF + C+ +E+EK+ + + T+
Sbjct: 796 TLRIIRLSHSASKQEKLPDEKETQNAEYIDKSCTFKKPQQCDRKEQEKEANSELTQGFR- 854
Query: 316 LFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEAENTEQVNKNS 370
FS +H+ KP+ + E I +K A N+E E Q + +T+ + +NS
Sbjct: 855 -FS-IHLKQKPKYV----KFQMEQISSGSSK--APNKEQEVQPQTLSTQTILENS 901
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo
sapiens]
Length = 6929
Score = 40.4 bits (93), Expect = 0.004
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 205 NATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLS----QES 260
N T LRE++E E SN + DK+T + +S L E S +
Sbjct: 736 NVTEDSDLRESEELECNTGSNITNMHQDKETSDAFHSATYTTISQLPDTETHSISKAKAD 795
Query: 261 EIKVKSILNSLSGEEL-----ETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITE 315
+++ + +S S +E ET E TF + C+ +E+EK+ + + T+
Sbjct: 796 TLRIIRLSHSASKQEKLPDEKETQNAEYIDKSCTFKKPQQCDRKEQEKEANSELTQGFR- 854
Query: 316 LFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEAENTEQVNKNS 370
FS +H+ KP+ + E I +K A N+E E Q + +T+ + +NS
Sbjct: 855 -FS-IHLKQKPKYV----KFQMEQISSGSSK--APNKEQEVQPQTLSTQTILENS 901
>gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens]
Length = 284
Score = 40.4 bits (93), Expect = 0.004
Identities = 57/244 (23%), Positives = 104/244 (42%), Gaps = 23/244 (9%)
Query: 196 KRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKT---HYGLLFDEFQ------- 245
K+ KG + S+ L++A+EK E+ E D + L+ +E
Sbjct: 48 KKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLA 107
Query: 246 -GLSHLEALEMLSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKK 304
L LE E + ESE +K ++ S + ++ E ++++ QLKE +AE + + EE
Sbjct: 108 TALQKLEEAEKAADESERGMK-VIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEE-- 164
Query: 305 GDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENE-EGEKQSEAEN- 362
+ + + S L + + +L+ + E K++T L E + EK S+ E+
Sbjct: 165 ----VARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDR 220
Query: 363 -TEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTAI--ERSQTLSQ 419
E++ S + A AE + +E L+ +K + AI E L+
Sbjct: 221 YEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALND 280
Query: 420 MTIV 423
MT +
Sbjct: 281 MTSI 284
>gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens]
Length = 284
Score = 40.4 bits (93), Expect = 0.004
Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 31/245 (12%)
Query: 196 KRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKT---HYGLLFDEFQ------- 245
K+ KG + S+ L++A+EK E+ E D + L+ +E
Sbjct: 48 KKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLA 107
Query: 246 -GLSHLEALEMLSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKK 304
L LE E + ESE +K ++ S + ++ E ++++ QLKE +AE + + EE
Sbjct: 108 TALQKLEEAEKAADESERGMK-VIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEE-- 164
Query: 305 GDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENE-EGEKQSEAEN- 362
+ + + S L + + +L+ + E K++T L E + EK S+ E+
Sbjct: 165 ----VARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDR 220
Query: 363 -TEQVNKNS-----IEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTAIER-SQ 415
E++ S E FA RS+ +L +L K A H +++ ++ + Q
Sbjct: 221 YEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEEKVA----HAKEENLSMHQMLDQ 276
Query: 416 TLSQM 420
TL ++
Sbjct: 277 TLLEL 281
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 40.4 bits (93), Expect = 0.004
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 263 KVKSILNSLSGE-ELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITELFSQLH 321
K+K +L S E E+ T+K E +++K+ + +E +E EEK K+ +L QL
Sbjct: 841 KIKPLLKSAETEKEMATMKEEFQKIKDELAKSEAKRKELEEKM--VTLLKEKNDL--QLQ 896
Query: 322 VSSKPEKLARARNTAHEWIRKSL-----TKPLAENEEGEKQSEAENTEQVNKNSIEDIHA 376
V ++ E LA A + I+ + K + E E E++ AE T K +ED +
Sbjct: 897 VQAEAEGLADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELT--AKKRKLEDECS 954
Query: 377 FAIRSL--AELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQMTIVLCKELSSLSKE 434
+ + ELT +E + +E+ ++ +T++++T KE +L +
Sbjct: 955 ELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLD--ETIAKLT----KEKKALQEA 1008
Query: 435 FTTCLTTAGVKEMADVLNPLITA 457
L +E D +N L A
Sbjct: 1009 HQQTLDDLQAEE--DKVNTLTKA 1029
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 40.4 bits (93), Expect = 0.004
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 263 KVKSILNSLSGE-ELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITELFSQLH 321
K+K +L S E E+ T+K E +++K+ + +E +E EEK K+ +L QL
Sbjct: 841 KIKPLLKSAETEKEMATMKEEFQKIKDELAKSEAKRKELEEKM--VTLLKEKNDL--QLQ 896
Query: 322 VSSKPEKLARARNTAHEWIRKSL-----TKPLAENEEGEKQSEAENTEQVNKNSIEDIHA 376
V ++ E LA A + I+ + K + E E E++ AE T K +ED +
Sbjct: 897 VQAEAEGLADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELT--AKKRKLEDECS 954
Query: 377 FAIRSL--AELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQMTIVLCKELSSLSKE 434
+ + ELT +E + +E+ ++ +T++++T KE +L +
Sbjct: 955 ELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLD--ETIAKLT----KEKKALQEA 1008
Query: 435 FTTCLTTAGVKEMADVLNPLITA 457
L +E D +N L A
Sbjct: 1009 HQQTLDDLQAEE--DKVNTLTKA 1029
>gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens]
Length = 284
Score = 40.0 bits (92), Expect = 0.005
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 33/248 (13%)
Query: 196 KRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKT---HYGLLFDEFQ------- 245
K+ KG + S+ ++EA+EK E E D + L+ +E
Sbjct: 48 KKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEADVASLNRRIQLVEEELDRAQERLA 107
Query: 246 -GLSHLEALEMLSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKK 304
L LE E + ESE +K I N +E E ++++ QLKE +AE + + EE
Sbjct: 108 TALQKLEEAEKAADESERGMKVIENRAMKDE-EKMELQEMQLKEAKHIAEDSDRKYEE-- 164
Query: 305 GDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIRKSLTKPL-----AENEEGEKQSE 359
+ + L +L S + ++A +R E +++ + L +E E K+ +
Sbjct: 165 ----VARKLVILEGELERSEERAEVAESRARQLEEELRTMDQALKSLMASEEEYSTKEDK 220
Query: 360 AENTEQVNKNSIEDIHA---FAIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERSQT 416
E ++ + +++ FA RS+A+L +I+ +T A K+E +E QT
Sbjct: 221 YEEEIKLLEEKLKEAETRAEFAERSVAKLEK-TIDDLEETLA----SAKEE--NVEIHQT 273
Query: 417 LSQMTIVL 424
L Q + L
Sbjct: 274 LDQTLLEL 281
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 40.0 bits (92), Expect = 0.005
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 57/266 (21%)
Query: 201 LMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDE-FQGLSHLEALEMLSQE 259
+ ++ LSQ L+E + K E ++V+ K+ GL+ E SH L + +E
Sbjct: 477 ISENSSDLSQKLKETQSKYEEAMKEVLSVQ--KQMKLGLVSPESMDNYSHFHELRVTEEE 534
Query: 260 SEIKVKSILNSLSGEELETLKV---------------------ELEQLKETF-SLAEFCE 297
+ + + N+L E KV E E++K ++ S+ E
Sbjct: 535 INVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIENMN 594
Query: 298 EE-----EEEKKGDEDFTKDITELFSQL--HVSSKPEKLARARNTAHEWIRKSLTKPLAE 350
+E E+ ++ E+ K L SQ+ S + E + A N + L K ++E
Sbjct: 595 KEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMID----ELNKQVSE 650
Query: 351 NEEGEKQSEAENTEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTA 410
+ K+++AE + + S+ED+ A E HK H + ++T
Sbjct: 651 LSQLYKEAQAELEDYRKRKSLEDVTA--------------EYIHKAE----HEKLMQLTN 692
Query: 411 IERSQ---TLSQMTIVLCKELSSLSK 433
+ R++ LS+M K L+ L++
Sbjct: 693 VSRAKAEDALSEMKSQYSKVLNELTQ 718
Score = 33.1 bits (74), Expect = 0.61
Identities = 35/176 (19%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 196 KRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEM 255
K L + S+VL E + +++ V+ K+ + + L + L
Sbjct: 697 KAEDALSEMKSQYSKVLNELTQLKQL-------VDAQKENSVSIT----EHLQVITTLRT 745
Query: 256 LSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITE 315
++E E K+ ++ L+ +E+E K+E + L+E ++ + +K +++
Sbjct: 746 AAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSV 805
Query: 316 LFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGE---KQSEAENTEQVNK 368
L S+L S K ++ + IR +++ E E + K E E E + K
Sbjct: 806 LASKLKESVKEKEKVHSEVVQ---IRSEVSQVKREKENIQTLLKSKEQEVNELLQK 858
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 40.0 bits (92), Expect = 0.005
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 57/266 (21%)
Query: 201 LMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDE-FQGLSHLEALEMLSQE 259
+ ++ LSQ L+E + K E ++V+ K+ GL+ E SH L + +E
Sbjct: 466 ISENSSDLSQKLKETQSKYEEAMKEVLSVQ--KQMKLGLVSPESMDNYSHFHELRVTEEE 523
Query: 260 SEIKVKSILNSLSGEELETLKV---------------------ELEQLKETF-SLAEFCE 297
+ + + N+L E KV E E++K ++ S+ E
Sbjct: 524 INVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIENMN 583
Query: 298 EE-----EEEKKGDEDFTKDITELFSQL--HVSSKPEKLARARNTAHEWIRKSLTKPLAE 350
+E E+ ++ E+ K L SQ+ S + E + A N + L K ++E
Sbjct: 584 KEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMID----ELNKQVSE 639
Query: 351 NEEGEKQSEAENTEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTA 410
+ K+++AE + + S+ED+ A E HK H + ++T
Sbjct: 640 LSQLYKEAQAELEDYRKRKSLEDVTA--------------EYIHKAE----HEKLMQLTN 681
Query: 411 IERSQ---TLSQMTIVLCKELSSLSK 433
+ R++ LS+M K L+ L++
Sbjct: 682 VSRAKAEDALSEMKSQYSKVLNELTQ 707
Score = 33.1 bits (74), Expect = 0.61
Identities = 35/176 (19%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 196 KRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEM 255
K L + S+VL E + +++ V+ K+ + + L + L
Sbjct: 686 KAEDALSEMKSQYSKVLNELTQLKQL-------VDAQKENSVSIT----EHLQVITTLRT 734
Query: 256 LSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITE 315
++E E K+ ++ L+ +E+E K+E + L+E ++ + +K +++
Sbjct: 735 AAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSV 794
Query: 316 LFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGE---KQSEAENTEQVNK 368
L S+L S K ++ + IR +++ E E + K E E E + K
Sbjct: 795 LASKLKESVKEKEKVHSEVVQ---IRSEVSQVKREKENIQTLLKSKEQEVNELLQK 847
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 40.0 bits (92), Expect = 0.005
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 57/266 (21%)
Query: 201 LMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDE-FQGLSHLEALEMLSQE 259
+ ++ LSQ L+E + K E ++V+ K+ GL+ E SH L + +E
Sbjct: 445 ISENSSDLSQKLKETQSKYEEAMKEVLSVQ--KQMKLGLVSPESMDNYSHFHELRVTEEE 502
Query: 260 SEIKVKSILNSLSGEELETLKV---------------------ELEQLKETF-SLAEFCE 297
+ + + N+L E KV E E++K ++ S+ E
Sbjct: 503 INVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIENMN 562
Query: 298 EE-----EEEKKGDEDFTKDITELFSQL--HVSSKPEKLARARNTAHEWIRKSLTKPLAE 350
+E E+ ++ E+ K L SQ+ S + E + A N + L K ++E
Sbjct: 563 KEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMID----ELNKQVSE 618
Query: 351 NEEGEKQSEAENTEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTA 410
+ K+++AE + + S+ED+ A E HK H + ++T
Sbjct: 619 LSQLYKEAQAELEDYRKRKSLEDVTA--------------EYIHKAE----HEKLMQLTN 660
Query: 411 IERSQ---TLSQMTIVLCKELSSLSK 433
+ R++ LS+M K L+ L++
Sbjct: 661 VSRAKAEDALSEMKSQYSKVLNELTQ 686
Score = 33.1 bits (74), Expect = 0.61
Identities = 35/176 (19%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 196 KRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEM 255
K L + S+VL E + +++ V+ K+ + + L + L
Sbjct: 665 KAEDALSEMKSQYSKVLNELTQLKQL-------VDAQKENSVSIT----EHLQVITTLRT 713
Query: 256 LSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITE 315
++E E K+ ++ L+ +E+E K+E + L+E ++ + +K +++
Sbjct: 714 AAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSV 773
Query: 316 LFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGE---KQSEAENTEQVNK 368
L S+L S K ++ + IR +++ E E + K E E E + K
Sbjct: 774 LASKLKESVKEKEKVHSEVVQ---IRSEVSQVKREKENIQTLLKSKEQEVNELLQK 826
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 40.0 bits (92), Expect = 0.005
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 57/266 (21%)
Query: 201 LMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDE-FQGLSHLEALEMLSQE 259
+ ++ LSQ L+E + K E ++V+ K+ GL+ E SH L + +E
Sbjct: 474 ISENSSDLSQKLKETQSKYEEAMKEVLSVQ--KQMKLGLVSPESMDNYSHFHELRVTEEE 531
Query: 260 SEIKVKSILNSLSGEELETLKV---------------------ELEQLKETF-SLAEFCE 297
+ + + N+L E KV E E++K ++ S+ E
Sbjct: 532 INVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIENMN 591
Query: 298 EE-----EEEKKGDEDFTKDITELFSQL--HVSSKPEKLARARNTAHEWIRKSLTKPLAE 350
+E E+ ++ E+ K L SQ+ S + E + A N + L K ++E
Sbjct: 592 KEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMID----ELNKQVSE 647
Query: 351 NEEGEKQSEAENTEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTA 410
+ K+++AE + + S+ED+ A E HK H + ++T
Sbjct: 648 LSQLYKEAQAELEDYRKRKSLEDVTA--------------EYIHKAE----HEKLMQLTN 689
Query: 411 IERSQ---TLSQMTIVLCKELSSLSK 433
+ R++ LS+M K L+ L++
Sbjct: 690 VSRAKAEDALSEMKSQYSKVLNELTQ 715
Score = 33.1 bits (74), Expect = 0.61
Identities = 35/176 (19%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 196 KRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEM 255
K L + S+VL E + +++ V+ K+ + + L + L
Sbjct: 694 KAEDALSEMKSQYSKVLNELTQLKQL-------VDAQKENSVSIT----EHLQVITTLRT 742
Query: 256 LSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITE 315
++E E K+ ++ L+ +E+E K+E + L+E ++ + +K +++
Sbjct: 743 AAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSV 802
Query: 316 LFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGE---KQSEAENTEQVNK 368
L S+L S K ++ + IR +++ E E + K E E E + K
Sbjct: 803 LASKLKESVKEKEKVHSEVVQ---IRSEVSQVKREKENIQTLLKSKEQEVNELLQK 855
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 40.0 bits (92), Expect = 0.005
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 57/266 (21%)
Query: 201 LMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDE-FQGLSHLEALEMLSQE 259
+ ++ LSQ L+E + K E ++V+ K+ GL+ E SH L + +E
Sbjct: 474 ISENSSDLSQKLKETQSKYEEAMKEVLSVQ--KQMKLGLVSPESMDNYSHFHELRVTEEE 531
Query: 260 SEIKVKSILNSLSGEELETLKV---------------------ELEQLKETF-SLAEFCE 297
+ + + N+L E KV E E++K ++ S+ E
Sbjct: 532 INVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIENMN 591
Query: 298 EE-----EEEKKGDEDFTKDITELFSQL--HVSSKPEKLARARNTAHEWIRKSLTKPLAE 350
+E E+ ++ E+ K L SQ+ S + E + A N + L K ++E
Sbjct: 592 KEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMID----ELNKQVSE 647
Query: 351 NEEGEKQSEAENTEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTA 410
+ K+++AE + + S+ED+ A E HK H + ++T
Sbjct: 648 LSQLYKEAQAELEDYRKRKSLEDVTA--------------EYIHKAE----HEKLMQLTN 689
Query: 411 IERSQ---TLSQMTIVLCKELSSLSK 433
+ R++ LS+M K L+ L++
Sbjct: 690 VSRAKAEDALSEMKSQYSKVLNELTQ 715
Score = 33.1 bits (74), Expect = 0.61
Identities = 35/176 (19%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 196 KRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEM 255
K L + S+VL E + +++ V+ K+ + + L + L
Sbjct: 694 KAEDALSEMKSQYSKVLNELTQLKQL-------VDAQKENSVSIT----EHLQVITTLRT 742
Query: 256 LSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITE 315
++E E K+ ++ L+ +E+E K+E + L+E ++ + +K +++
Sbjct: 743 AAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSV 802
Query: 316 LFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGE---KQSEAENTEQVNK 368
L S+L S K ++ + IR +++ E E + K E E E + K
Sbjct: 803 LASKLKESVKEKEKVHSEVVQ---IRSEVSQVKREKENIQTLLKSKEQEVNELLQK 855
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 40.0 bits (92), Expect = 0.005
Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 57/266 (21%)
Query: 201 LMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDE-FQGLSHLEALEMLSQE 259
+ ++ LSQ L+E + K E ++V+ K+ GL+ E SH L + +E
Sbjct: 474 ISENSSDLSQKLKETQSKYEEAMKEVLSVQ--KQMKLGLVSPESMDNYSHFHELRVTEEE 531
Query: 260 SEIKVKSILNSLSGEELETLKV---------------------ELEQLKETF-SLAEFCE 297
+ + + N+L E KV E E++K ++ S+ E
Sbjct: 532 INVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIENMN 591
Query: 298 EE-----EEEKKGDEDFTKDITELFSQL--HVSSKPEKLARARNTAHEWIRKSLTKPLAE 350
+E E+ ++ E+ K L SQ+ S + E + A N + L K ++E
Sbjct: 592 KEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMID----ELNKQVSE 647
Query: 351 NEEGEKQSEAENTEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTA 410
+ K+++AE + + S+ED+ A E HK H + ++T
Sbjct: 648 LSQLYKEAQAELEDYRKRKSLEDVTA--------------EYIHKAE----HEKLMQLTN 689
Query: 411 IERSQ---TLSQMTIVLCKELSSLSK 433
+ R++ LS+M K L+ L++
Sbjct: 690 VSRAKAEDALSEMKSQYSKVLNELTQ 715
Score = 33.1 bits (74), Expect = 0.61
Identities = 35/176 (19%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 196 KRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEM 255
K L + S+VL E + +++ V+ K+ + + L + L
Sbjct: 694 KAEDALSEMKSQYSKVLNELTQLKQL-------VDAQKENSVSIT----EHLQVITTLRT 742
Query: 256 LSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITE 315
++E E K+ ++ L+ +E+E K+E + L+E ++ + +K +++
Sbjct: 743 AAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVSV 802
Query: 316 LFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGE---KQSEAENTEQVNK 368
L S+L S K ++ + IR +++ E E + K E E E + K
Sbjct: 803 LASKLKESVKEKEKVHSEVVQ---IRSEVSQVKREKENIQTLLKSKEQEVNELLQK 855
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal
[Homo sapiens]
Length = 1937
Score = 39.7 bits (91), Expect = 0.006
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 263 KVKSILNSLSGE-ELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITELFSQLH 321
K+K +L S E E+ T+K E ++ K+ + +E +E EEK K+ +L QL
Sbjct: 838 KIKPLLKSAETEKEMATMKEEFQKTKDELAKSEAKRKELEEKM--VTLLKEKNDL--QLQ 893
Query: 322 VSSKPEKLARARNTAHEWIRKSL-----TKPLAENEEGEKQSEAENTEQVNKNSIED 373
V S+ + LA A + I+ + K + E E E++ AE T K +ED
Sbjct: 894 VQSEADSLADAEERCEQLIKNKIQLEAKIKEVTERAEEEEEINAELT--AKKRKLED 948
Score = 29.3 bits (64), Expect = 8.8
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 22/189 (11%)
Query: 205 NATLSQVLREAKEKEE----IRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLSQES 260
N S+V R+ EK+E ++ ++ VET + T + L + +E E
Sbjct: 1569 NQVKSEVDRKIAEKDEEIDQLKRNHTRVVETMQSTLDAEIRSRNDALRVKKKMEGDLNEM 1628
Query: 261 EIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTK--------D 312
EI++ N L+ E L + LKET + +E+ K + +
Sbjct: 1629 EIQLNHA-NRLAAESLRNYRNTQGILKETQLHLDDALRGQEDLKEQLAIVERRANLLQAE 1687
Query: 313 ITELFSQLHVSSKPEKLARARNT-AHEWIR------KSL--TKPLAENEEGEKQSEAENT 363
I EL++ L + + K+A A E ++ SL TK EN+ + QSE E
Sbjct: 1688 IEELWATLEQTERSRKIAEQELLDASERVQLLHTQNTSLINTKKKLENDVSQLQSEVEEV 1747
Query: 364 EQVNKNSIE 372
Q ++N+ E
Sbjct: 1748 IQESRNAEE 1756
>gi|94680976 coiled-coil domain containing 112 isoform 1 [Homo
sapiens]
Length = 529
Score = 39.7 bits (91), Expect = 0.006
Identities = 51/217 (23%), Positives = 84/217 (38%), Gaps = 24/217 (11%)
Query: 175 DALEFIGKKTMDVIAEGDPGFKRTKGLMNRNATLSQVLREAKE--KEEIRTSNEVTVETD 232
+ LE + KT D + + + +++ L R Q+ + K+ +EEI E T
Sbjct: 274 EVLEHLPGKTQDEVQQHEKWYQKFLALEERKKESIQIWKTKKQQKREEIFKLKEKADNTP 333
Query: 233 ----KKTHYGLLFDEFQGLSHLEALEMLSQESEIKVKSILNSLSGEELETLKVELEQLKE 288
K E Q A+E ++ I++ S EE E K ++ +
Sbjct: 334 VLFHNKQEDNQKQKEEQRKKQKLAVEAWKKQKSIEMSMKCASQLKEEEEKEKKHQKERQR 393
Query: 289 TFSLAEFCEEEEEEKKGDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIR------- 341
F L E ++KK E+F L + + K EK + +N A E R
Sbjct: 394 QFKLKLLLESYTQQKKEQEEF------LRLEKEIREKAEKAEKRKNAADEISRFQERDLH 447
Query: 342 ----KSLTKPLAENEEGEKQSE-AENTEQVNKNSIED 373
K L + E+E+ +KQ A+ E+V N D
Sbjct: 448 KLELKILDRQAKEDEKSQKQRRLAKLKEKVENNVSRD 484
>gi|145580595 coiled-coil domain containing 112 isoform 2 [Homo
sapiens]
Length = 446
Score = 39.7 bits (91), Expect = 0.006
Identities = 51/217 (23%), Positives = 84/217 (38%), Gaps = 24/217 (11%)
Query: 175 DALEFIGKKTMDVIAEGDPGFKRTKGLMNRNATLSQVLREAKE--KEEIRTSNEVTVETD 232
+ LE + KT D + + + +++ L R Q+ + K+ +EEI E T
Sbjct: 191 EVLEHLPGKTQDEVQQHEKWYQKFLALEERKKESIQIWKTKKQQKREEIFKLKEKADNTP 250
Query: 233 ----KKTHYGLLFDEFQGLSHLEALEMLSQESEIKVKSILNSLSGEELETLKVELEQLKE 288
K E Q A+E ++ I++ S EE E K ++ +
Sbjct: 251 VLFHNKQEDNQKQKEEQRKKQKLAVEAWKKQKSIEMSMKCASQLKEEEEKEKKHQKERQR 310
Query: 289 TFSLAEFCEEEEEEKKGDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIR------- 341
F L E ++KK E+F L + + K EK + +N A E R
Sbjct: 311 QFKLKLLLESYTQQKKEQEEF------LRLEKEIREKAEKAEKRKNAADEISRFQERDLH 364
Query: 342 ----KSLTKPLAENEEGEKQSE-AENTEQVNKNSIED 373
K L + E+E+ +KQ A+ E+V N D
Sbjct: 365 KLELKILDRQAKEDEKSQKQRRLAKLKEKVENNVSRD 401
>gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo
sapiens]
Length = 551
Score = 39.7 bits (91), Expect = 0.006
Identities = 51/258 (19%), Positives = 104/258 (40%), Gaps = 47/258 (18%)
Query: 184 TMDVIAEGDPGFKRTKGLMNRNATLSQVLREAKEKEE--IRTSNEVTVETDKKTHYGLLF 241
TMD + K+ + + N N LS + AKE+ + ++ +N++ +E +++
Sbjct: 138 TMDAVMTRKKIMKQKEMVWNNNKKLSDLEEVAKERAQNLLQRANKLRMEQEEE------- 190
Query: 242 DEFQGLSHLEALEMLSQESEIKVKSILNSLS-GEELETLKVELEQLKETFSLAEFCEEEE 300
L + + + ++ I+ IL +EL+T + L+Q+ E +EE
Sbjct: 191 -----LKDMSKIILNAKCHAIRDAQILEKQQIQKELDTEEKRLDQMMEVERQKSIQRQEE 245
Query: 301 EEKKGDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEA 360
E+K E+ + ++ Q+ + + L LAE E EK+
Sbjct: 246 LERKRREERIRGRRQIVEQMEKNQEERSL------------------LAEQREQEKEQML 287
Query: 361 ENTEQVNKNSIEDIHAFAIRSL---AELTACSIELFHKTAALVLHGRKQEVTAIERSQTL 417
E EQ+ + ++D+ + L AE+ + E +KQ+ + + +
Sbjct: 288 EYMEQLQEEDLKDMERRQQQKLKMQAEIKRINDE-----------NQKQKAELLAQEKLA 336
Query: 418 SQMTIVLCKELSSLSKEF 435
QM + K+ + EF
Sbjct: 337 DQMVMEFTKKKMAREAEF 354
>gi|223555975 tropomyosin 4 isoform 1 [Homo sapiens]
Length = 284
Score = 38.9 bits (89), Expect = 0.011
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 37/251 (14%)
Query: 196 KRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKT---HYGLLFDEFQ------- 245
K+ KG + S+ L++A+EK E+ E D L+ +E
Sbjct: 48 KKLKGTEDELDKYSEDLKDAQEKLELTEKKASDAEGDVAALNRRIQLVEEELDRAQERLA 107
Query: 246 -GLSHLEALEMLSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEE-- 302
L LE E + ESE +K I N +E E ++++ QLKE +AE + + EE
Sbjct: 108 TALQKLEEAEKAADESERGMKVIENRAMKDE-EKMEIQEMQLKEAKHIAEEADRKYEEVA 166
Query: 303 -----KKGDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQ 357
+G+ + ++ E+ S+L E+L N KSL A + EK+
Sbjct: 167 RKLVILEGELERAEERAEV-SELKCGDLEEELKNVTNNL-----KSL--EAASEKYSEKE 218
Query: 358 SEAENTEQVNKNSIEDIHA---FAIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERS 414
+ E ++ + +++ FA R++A+L +L K A K+E + ++
Sbjct: 219 DKYEEEIKLLSDKLKEAETRAEFAERTVAKLEKTIDDLEEKLAQ-----AKEENVGLHQT 273
Query: 415 --QTLSQMTIV 423
QTL+++ +
Sbjct: 274 LDQTLNELNCI 284
>gi|4507651 tropomyosin 4 isoform 2 [Homo sapiens]
Length = 248
Score = 38.9 bits (89), Expect = 0.011
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 39/268 (14%)
Query: 173 GLDALEFIGKKTMDVIAEGDPGFKRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETD 232
GL++LE + +K + + D R +GL R + RE E + + + + +
Sbjct: 3 GLNSLEAVKRKIQALQQQADEAEDRAQGLQ-RELDGERERREKAEGDVAALNRRIQLVEE 61
Query: 233 KKTHYGLLFDEFQ-----GLSHLEALEMLSQESEIKVKSILNSLSGEELETLKVELEQLK 287
+ D Q L LE E + ESE +K I N +E E ++++ QLK
Sbjct: 62 E-------LDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDE-EKMEIQEMQLK 113
Query: 288 ETFSLAEFCEEEEEE-------KKGDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWI 340
E +AE + + EE +G+ + ++ E+ S+L E+L N
Sbjct: 114 EAKHIAEEADRKYEEVARKLVILEGELERAEERAEV-SELKCGDLEEELKNVTNNL---- 168
Query: 341 RKSLTKPLAENEEGEKQSEAENTEQVNKNSIEDIHA---FAIRSLAELTACSIELFHKTA 397
KSL A + EK+ + E ++ + +++ FA R++A+L +L K A
Sbjct: 169 -KSL--EAASEKYSEKEDKYEEEIKLLSDKLKEAETRAEFAERTVAKLEKTIDDLEEKLA 225
Query: 398 ALVLHGRKQEVTAIERS--QTLSQMTIV 423
K+E + ++ QTL+++ +
Sbjct: 226 Q-----AKEENVGLHQTLDQTLNELNCI 248
>gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens]
Length = 284
Score = 38.9 bits (89), Expect = 0.011
Identities = 53/245 (21%), Positives = 108/245 (44%), Gaps = 31/245 (12%)
Query: 196 KRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKT---HYGLLFDEFQ------- 245
K+ KG + S+ L++A+EK E+ E D + L+ +E
Sbjct: 48 KKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLA 107
Query: 246 -GLSHLEALEMLSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKK 304
L LE E + ESE +K ++ S + ++ E ++++ QLKE +AE + + EE
Sbjct: 108 TALQKLEEAEKAADESERGMK-VIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEE-- 164
Query: 305 GDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIRKSLTKPL-----AENEEGEKQSE 359
+ + + S L + + +L+ + E + + + L AE++ +K+
Sbjct: 165 ----VARKLVIIESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDR 220
Query: 360 AENTEQVNKNSIEDIHA---FAIRSLAELTACSIELFHKTAALVLHGRKQEVTAIER-SQ 415
E +V + +++ FA RS+ +L +L K A H +++ ++ + Q
Sbjct: 221 YEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEEKVA----HAKEENLSMHQMLDQ 276
Query: 416 TLSQM 420
TL ++
Sbjct: 277 TLLEL 281
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 38.5 bits (88), Expect = 0.014
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 20/202 (9%)
Query: 263 KVKSILNSLSGE-ELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITELFSQLH 321
K+K +L S E E+ ++K E +LKE +E +E EEK ++ +L QL
Sbjct: 835 KIKPLLKSAEREKEMASMKEEFTRLKEALEKSEARRKELEEKM--VSLLQEKNDL--QLQ 890
Query: 322 VSSKPEKLARARNTAHEWIRKSL-----TKPLAENEEGEKQSEAENTEQVNKNSIEDIHA 376
V ++ + LA A + I+ + K + E E E++ AE T K +ED +
Sbjct: 891 VQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNERLEDEEEMNAELT--AKKRKLEDECS 948
Query: 377 FAIRSLAELTACSIELFHKTAALVLHGRKQEVTAI-ERSQTLSQMTIVLCKELSSLSKEF 435
R + +L EL H + +V + E L ++ L KE +L +
Sbjct: 949 ELKRDIDDL-----ELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAH 1003
Query: 436 TTCLTTAGVKEMADVLNPLITA 457
L +E D +N L A
Sbjct: 1004 QQALDDLQAEE--DKVNTLTKA 1023
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 38.5 bits (88), Expect = 0.014
Identities = 60/287 (20%), Positives = 112/287 (39%), Gaps = 27/287 (9%)
Query: 160 TAVQSTGKSVISGGLDALEFIGKKTMDVIAEGDPGFKRTKGLMNRNATLSQVLREAKEKE 219
T V G I G + + + T +E P K ++++ + + ++
Sbjct: 1783 TNVTEEGTQSIPGETEEQDSLSMSTRPTCSESVPSAKSANPAVSKDFSSHDEINNYLQQI 1842
Query: 220 EIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLSQESEIKVKSILNSLSGEELETL 279
+ +E +K+ + EF E +LSQ I K + EE+ +
Sbjct: 1843 DQLKERIAGLEEEKQKN-----KEFSQTLENEKNTLLSQ---ISTKDGELKMLQEEVTKM 1894
Query: 280 KVELEQLKETFSLAEFCEEEEEEKKGD--EDFTKDITELFSQLHVSSKPEKLARARNTAH 337
+ +Q++E S +E EE+K D E + EL + + A+ +N
Sbjct: 1895 NLLNQQIQEELSRVTKLKETAEEEKDDLEERLMNQLAELNGSIGNYCQDVTDAQIKNELL 1954
Query: 338 EWIRKSLTKPLAENEEGEKQSEAENTE---QVNKNSIEDI-----------HAFAIRSLA 383
E K+L K ++E EE ++Q E T+ ++ K +E I HA ++ L
Sbjct: 1955 ESEMKNLKKCVSELEEEKQQLVKEKTKVESEIRKEYLEKIQGAQKEPGNKSHAKELQELL 2014
Query: 384 ELTACSIELFHKTAALV---LHGRKQEVTAIERSQTLSQMTIVLCKE 427
+ ++ K + ++ V A+E QT SQ + + KE
Sbjct: 2015 KEKQQEVKQLQKDCIRYQEKISALERTVKALEFVQTESQKDLEITKE 2061
Score = 38.1 bits (87), Expect = 0.019
Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 37/263 (14%)
Query: 207 TLSQVLREAKEKEEIRTSNEVTVE----TDKKTHYGL----LFDEFQGLSHLEALEMLSQ 258
TL Q + E K+++ S +T + ++K G+ L ++ LS E +
Sbjct: 891 TLQQTIEE-KDQQVTEISFSMTEKMVQLNEEKFSLGVEIKTLKEQLNLLSRAEEAKKEQV 949
Query: 259 ESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITELFS 318
E + +V S L E ++ E+L+ F L + +E E+ K+ + + EL
Sbjct: 950 EEDNEVSSGLKQNYDEMSPAGQISKEELQHEFDLLK--KENEQRKRKLQAALINRKELLQ 1007
Query: 319 QLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEAENTEQVNK---NSIEDIH 375
+ VS E+LA ++ + + I PL+E E GE + + EN E K + ++I
Sbjct: 1008 R--VSRLEEELANLKDESKKEI------PLSETERGEVEEDKENKEYSEKCVTSKCQEIE 1059
Query: 376 AFAIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERSQTL-SQMTIVLCKELSSLSKE 434
+ ++++E +EL H + ++++ A E+ Q L QM L + + +
Sbjct: 1060 IYLKQTISEK---EVELQH-----IRKDLEEKLAAEEQFQALVKQMNQTLQDKTNQID-- 1109
Query: 435 FTTCLTTAGVKEMADVLNPLITA 457
L A + E ++ LIT+
Sbjct: 1110 ----LLQAEISENQAIIQKLITS 1128
Score = 29.6 bits (65), Expect = 6.7
Identities = 67/327 (20%), Positives = 134/327 (40%), Gaps = 44/327 (13%)
Query: 204 RNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLSQESEIK 263
RN LSQ L++ + + + TVET+++ LL E +E+ E ++
Sbjct: 288 RNQILSQQLQQMEAEHNTLRN---TVETEREESKILL----------EKMELEVAERKLS 334
Query: 264 VKSILNSLSG--EELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDIT--ELFSQ 319
++ + E+ E +L+ +S E + E E+K + T EL S
Sbjct: 335 FHNLQEEMHHLLEQFEQAGQAQAELESRYSALEQKHKAEMEEKTSHILSLQKTGQELQSA 394
Query: 320 LH-VSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEA---------ENTEQVNKN 369
+ + KL + +N + ++ + T E++ +K E + E ++
Sbjct: 395 CDALKDQNSKLLQDKN--EQAVQSAQTIQQLEDQLQQKSKEISQFLNRLPLQQHETASQT 452
Query: 370 SIEDIH-----AFAIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQMTIVL 424
S D++ A ++A L +EL ++ AL+L + E E + SQ+T++
Sbjct: 453 SFPDVYNEGTQAVTEENIASLQKRVVELENEKGALLLSSIELEELKAENEKLSSQITLLE 512
Query: 425 C--------KELSSLS-KEFTTCLTTAGVKEMADVLNPLITAVFLEASNSASYIQDAFQL 475
+E+S +S + +++ + DVL + E S +++A Q
Sbjct: 513 AQNRTGEADREVSEISIVDIANKRSSSAEESGQDVLENTFSQKHKELSVLLLEMKEA-QE 571
Query: 476 LLPVLEISLIENKIESHRHELQGQKPL 502
+ L++ L + E HE+ QK +
Sbjct: 572 EIAFLKLQLQGKRAEEADHEVLDQKEM 598
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.125 0.335
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,612,014
Number of Sequences: 37866
Number of extensions: 763129
Number of successful extensions: 4666
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 302
Number of HSP's that attempted gapping in prelim test: 4198
Number of HSP's gapped (non-prelim): 652
length of query: 505
length of database: 18,247,518
effective HSP length: 107
effective length of query: 398
effective length of database: 14,195,856
effective search space: 5649950688
effective search space used: 5649950688
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.