Guide to the Human Genome
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Name: TK2 Sequence: fasta or formatted (307aa) NCBI GI: 92859641
Description:

thymidine kinase 2, mitochondrial

Referenced in:

Mitochondria
Nucleotide Pathways
Pyrimidine Biosynthesis and Catabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         20           2
 C cysteine            2.0          6           1
 D aspartate           3.6         11           1
 E glutamate           8.1         25           3
 F phenylalanine       2.6          8           2
 G glycine             5.9         18           1
 H histidine           3.6         11           2
 I isoleucine          3.6         11           1
 K lysine              4.9         15           2
 L leucine             9.8         30           2
 M methionine          3.3         10           1
 N asparagine          2.9          9           1
 P proline             7.2         22           2
 Q glutamine           2.6          8           1
 R arginine           10.7         33           3
 S serine              6.5         20           2
 T threonine           3.9         12           2
 V valine              7.2         22           2
 W tryptophan          2.6          8           1
 Y tyrosine            2.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thymidine kinase 2, mitochondrial 
DCK                   0.183   deoxycytidine kinase 
DGUOK                 0.155   deoxyguanosine kinase isoform a precursor 
DGUOK                 0.044   deoxyguanosine kinase isoform b precursor 
CMPK2                 0.021   UMP-CMP kinase 2 
LOC100288108          0.020   PREDICTED: hypothetical protein 
LOC100288108          0.020   PREDICTED: hypothetical protein XP_002342919 
LOC645321             0.016   PREDICTED: hypothetical protein 
LOC645321             0.016   PREDICTED: hypothetical protein 
LOC100292573          0.013   PREDICTED: hypothetical protein 
LOC100290137          0.013   PREDICTED: hypothetical protein XP_002347927 
LOC100287408          0.013   PREDICTED: hypothetical protein XP_002344194 
AZI1                  0.013   5-azacytidine induced 1 isoform b 
AZI1                  0.013   5-azacytidine induced 1 isoform a 
ZFP28                 0.011   zinc finger protein 28 
LOC100292819          0.010   PREDICTED: hypothetical protein 
APC2                  0.008   adenomatosis polyposis coli 2 
SMCR7                 0.008   Smith-Magenis syndrome chromosome region, candidate...
MUM1                  0.008   melanoma ubiquitous mutated protein 
CDKN2A                0.008   cyclin-dependent kinase inhibitor 2A isoform 4 [Homo...
TAF4                  0.008   TBP-associated factor 4 
FAM110A               0.008   hypothetical protein LOC83541 
FAM110A               0.008   hypothetical protein LOC83541 
FAM110A               0.008   hypothetical protein LOC83541 
SYDE2                 0.008   synapse defective 1, Rho GTPase, homolog 2 
ATG2A                 0.007   autophagy related 2A 
CYP21A2               0.007   cytochrome P450, family 21, subfamily A, polypeptid...
CYP21A2               0.007   cytochrome P450, family 21, subfamily A, polypeptide...
BCAS4                 0.007   breast carcinoma amplified sequence 4 isoform c [Hom...
LOC100293975          0.007   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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