Guide to the Human Genome
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Name: CXorf22 Sequence: fasta or formatted (976aa) NCBI GI: 90963001
Description:

hypothetical protein LOC170063

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         45           2
 C cysteine            2.2         21           2
 D aspartate           4.3         42           3
 E glutamate           6.4         62           3
 F phenylalanine       5.3         52           2
 G glycine             5.5         54           3
 H histidine           2.9         28           2
 I isoleucine          7.5         73           3
 K lysine              7.0         68           2
 L leucine             9.0         88           2
 M methionine          2.8         27           1
 N asparagine          4.2         41           2
 P proline             5.2         51           1
 Q glutamine           4.6         45           2
 R arginine            4.5         44           2
 S serine              7.1         69           2
 T threonine           5.8         57           2
 V valine              7.7         75           2
 W tryptophan          0.5          5           1
 Y tyrosine            3.0         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC170063 
HYDIN                 0.009   hydrocephalus inducing isoform a 
HYDIN                 0.009   hydrocephalus inducing isoform b 
DLEC1                 0.005   deleted in lung and esophageal cancer 1 isoform DLEC...
DLEC1                 0.005   deleted in lung and esophageal cancer 1 isoform DLEC...
ORAI1                 0.004   calcium release-activated calcium channel protein 1 ...
PHRF1                 0.004   PHD and ring finger domains 1 
FANCD2                0.004   Fanconi anemia complementation group D2 isoform b [H...
FANCD2                0.004   Fanconi anemia complementation group D2 isoform a [H...
SULT1C3               0.004   sulfotransferase family, cytosolic, 1C, member 3 [Ho...
ANKRD12               0.004   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.004   ankyrin repeat domain 12 isoform 1 
ZMAT1                 0.004   zinc finger, matrin type 1 isoform 1 
ZMAT1                 0.004   zinc finger, matrin type 1 isoform 3 
LOC100293496          0.003   PREDICTED: hypothetical protein 
LOC100287256          0.003   PREDICTED: hypothetical protein 
LOC100287256          0.003   PREDICTED: hypothetical protein XP_002342497 
MAST2                 0.003   microtubule associated serine/threonine kinase 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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