Guide to the Human Genome
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Name: ACSS2 Sequence: fasta or formatted (701aa) NCBI GI: 8923896
Description:

acyl-CoA synthetase short-chain family member 2 isoform 1

Referenced in:

Amino Acid Catabolism
Fatty Acid Synthesis

Other entries for this name:
alt prot [714aa] acyl-CoA synthetase short-chain family member 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         44           2
 C cysteine            2.7         19           2
 D aspartate           4.6         32           2
 E glutamate           7.4         52           2
 F phenylalanine       4.3         30           2
 G glycine             8.8         62           2
 H histidine           3.1         22           1
 I isoleucine          5.1         36           1
 K lysine              5.1         36           2
 L leucine             7.6         53           2
 M methionine          2.1         15           1
 N asparagine          2.3         16           1
 P proline             6.3         44           3
 Q glutamine           3.4         24           1
 R arginine            5.1         36           2
 S serine              5.7         40           2
 T threonine           6.3         44           2
 V valine              7.4         52           2
 W tryptophan          2.4         17           2
 Y tyrosine            3.9         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-CoA synthetase short-chain family member 2 isofo... 
ACSS2                 0.994   acyl-CoA synthetase short-chain family member 2 iso...
ACSS1                 0.407   acyl-CoA synthetase short-chain family member 1 [Hom...
ACSS3                 0.234   acyl-CoA synthetase short-chain family member 3 [Hom...
AACS                  0.125   acetoacetyl-CoA synthetase 
ACSM3                 0.111   SA hypertension-associated homolog isoform 1 
ACSM4                 0.109   acyl-CoA synthetase medium-chain family member 4 [H...
ACSM5                 0.107   acyl-CoA synthetase medium-chain family member 5 [Ho...
ACSM1                 0.096   acyl-CoA synthetase medium-chain family member 1 [H...
ACSM2A                0.089   acyl-CoA synthetase medium-chain family member 2A [H...
ACSM2B                0.080   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2B                0.080   acyl-CoA synthetase medium-chain family member 2B [...
LOC100291873          0.077   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
LOC100291873          0.077   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
ACSM3                 0.055   SA hypertension-associated homolog isoform 2 
ACSF3                 0.054   acyl-CoA synthetase family member 3 
ACSF3                 0.054   acyl-CoA synthetase family member 3 
C10orf129             0.037   acyl-coenzyme A synthetase ACSM6, mitochondrial [Ho...
SLC27A4               0.031   solute carrier family 27 (fatty acid transporter), m...
SLC27A1               0.028   solute carrier family 27, member 1 
ACSF2                 0.022   acyl-CoA synthetase family member 2 
SLC27A5               0.022   solute carrier family 27 (fatty acid transporter), m...
SLC27A3               0.018   solute carrier family 27 member 3 
SLC27A6               0.017   solute carrier family 27 (fatty acid transporter), m...
SLC27A6               0.017   solute carrier family 27 (fatty acid transporter), m...
AASDH                 0.015   aminoadipate-semialdehyde dehydrogenase 
SLC27A2               0.012   solute carrier family 27 (fatty acid transporter), ...
ACSL4                 0.010   acyl-CoA synthetase long-chain family member 4 isofor...
ACSL4                 0.010   acyl-CoA synthetase long-chain family member 4 isofo...
ACSBG1                0.008   lipidosin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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