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Search of human proteins with 8922333
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922333 pleckstrin homology domain containing, family J
member 1 [Homo sapiens]
(149 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922333 pleckstrin homology domain containing, family J membe... 298 9e-82
gi|24432056 hypothetical protein LOC144717 [Homo sapiens] 54 6e-08
gi|38505170 Ras protein-specific guanine nucleotide-releasing fa... 43 1e-04
gi|224586880 Ras protein-specific guanine nucleotide-releasing f... 41 3e-04
gi|24797099 Ras protein-specific guanine nucleotide-releasing fa... 41 3e-04
gi|115583657 hypothetical protein LOC150368 [Homo sapiens] 36 0.010
gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens] 34 0.040
gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens] 34 0.040
gi|170014705 SH3-domain binding protein 2 isoform a [Homo sapiens] 34 0.040
gi|170014703 SH3-domain binding protein 2 isoform a [Homo sapiens] 34 0.040
gi|206597522 ArfGAP with SH3 domain, ankyrin repeat and PH domai... 34 0.040
gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain ... 34 0.040
gi|8923763 centaurin-alpha 2 protein [Homo sapiens] 33 0.089
gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens] 32 0.15
gi|55770898 Rho GTPase activating protein 25 isoform a [Homo sap... 32 0.20
gi|7661882 Rho GTPase activating protein 25 isoform b [Homo sapi... 32 0.20
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 31 0.44
gi|221307473 ArfGAP with SH3 domain, ankyrin repeat and PH domai... 30 0.58
gi|19923540 ArfGAP with SH3 domain, ankyrin repeat and PH domain... 30 0.58
gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo ... 30 0.58
gi|206597515 ArfGAP with RhoGAP domain, ankyrin repeat and PH do... 30 0.98
gi|206597513 ArfGAP with RhoGAP domain, ankyrin repeat and PH do... 30 0.98
gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... 30 0.98
gi|6806913 centaurin, alpha 1 [Homo sapiens] 30 0.98
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 28 2.2
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 28 3.7
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 28 3.7
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 28 3.7
gi|28626504 fermitin family homolog 3 short form [Homo sapiens] 28 3.7
gi|41281905 fermitin family homolog 3 long form [Homo sapiens] 28 3.7
>gi|8922333 pleckstrin homology domain containing, family J member 1
[Homo sapiens]
Length = 149
Score = 298 bits (764), Expect = 9e-82
Identities = 149/149 (100%), Positives = 149/149 (100%)
Query: 1 MRYNEKELQALSRQPAEMAAELGMRGPKKGSVLKRRLVKLVVNFLFYFRTDEAEPVGALL 60
MRYNEKELQALSRQPAEMAAELGMRGPKKGSVLKRRLVKLVVNFLFYFRTDEAEPVGALL
Sbjct: 1 MRYNEKELQALSRQPAEMAAELGMRGPKKGSVLKRRLVKLVVNFLFYFRTDEAEPVGALL 60
Query: 61 LERCRVVREEPGTFSISFIEDPERKYHFECSSEEQCQEWMEALRRASYEFMRRSLIFYRN 120
LERCRVVREEPGTFSISFIEDPERKYHFECSSEEQCQEWMEALRRASYEFMRRSLIFYRN
Sbjct: 61 LERCRVVREEPGTFSISFIEDPERKYHFECSSEEQCQEWMEALRRASYEFMRRSLIFYRN 120
Query: 121 EIRKVTGKDPLEQFGISEEARFQLSGLQA 149
EIRKVTGKDPLEQFGISEEARFQLSGLQA
Sbjct: 121 EIRKVTGKDPLEQFGISEEARFQLSGLQA 149
>gi|24432056 hypothetical protein LOC144717 [Homo sapiens]
Length = 249
Score = 53.5 bits (127), Expect = 6e-08
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 1 MRYNEKELQ--ALSRQPAEMAAELGMRGPKKGSVLKRRLVKLVVNFLFYFRTDEA-EPVG 57
M+ NE+ L A P + A L +G + + +R V L N LFYF + EPVG
Sbjct: 1 MKLNERSLAFYATCDAPVDNAGFLYKKGGRHAAYHRRWFV-LRGNMLFYFEDAASREPVG 59
Query: 58 ALLLERCRVVREEPG---TFSISFIEDPERKYHFECSSEEQCQEWMEALRRASYEFMRRS 114
++LE C V E F++ F R Y S++ + W++AL RAS++++R
Sbjct: 60 VIILEGCTVELVEAAEEFAFAVRFAGTRARTYVLAAESQDAMEGWVKALSRASFDYLRLV 119
Query: 115 LIFYRNEIRKVTG 127
+ ++ V G
Sbjct: 120 VRELEQQLAAVRG 132
>gi|38505170 Ras protein-specific guanine nucleotide-releasing
factor 2 [Homo sapiens]
Length = 1237
Score = 42.7 bits (99), Expect = 1e-04
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 21/129 (16%)
Query: 1 MRYNEKELQALSRQPAEMAAELGMRGPKKGSVLK--RRLVKLVVNFLFYFRTDEA-EPVG 57
+RYNE L+ + + G K + + L N LFYF +++ P G
Sbjct: 5 VRYNEGHALYLAFLARKEGTKRGFLSKKTAEASRWHEKWFALYQNVLFYFEGEQSCRPAG 64
Query: 58 ALLLERCRVVR------------------EEPGTFSISFIEDPERKYHFECSSEEQCQEW 99
LLE C R ++ F++ F + ++ C E+ +EW
Sbjct: 65 MYLLEGCSCERTPAPPRAGAGQGGVRDALDKQYYFTVLFGHEGQKPLELRCEEEQDGKEW 124
Query: 100 MEALRRASY 108
MEA+ +ASY
Sbjct: 125 MEAIHQASY 133
>gi|224586880 Ras protein-specific guanine nucleotide-releasing
factor 1 isoform 3 [Homo sapiens]
Length = 1257
Score = 41.2 bits (95), Expect = 3e-04
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 24/107 (22%)
Query: 26 GPKKGSVLKR---------RLVKLVVNFLFYFRTDEAE-PVGALLLERCRVVR------- 68
G +KG + KR + L+ N LFYF +D + P G LLE C R
Sbjct: 23 GTRKGYLSKRSSDNTKWQTKWFALLQNLLFYFESDSSSRPSGLYLLEGCVCDRAPSPKPA 82
Query: 69 -------EEPGTFSISFIEDPERKYHFECSSEEQCQEWMEALRRASY 108
E+ F+++F + ++ + C EW+ A+ ASY
Sbjct: 83 LSAKEPLEKQHYFTVNFSHENQKALELRTEDAKDCDEWVAAIAHASY 129
>gi|24797099 Ras protein-specific guanine nucleotide-releasing
factor 1 isoform 1 [Homo sapiens]
Length = 1273
Score = 41.2 bits (95), Expect = 3e-04
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 24/107 (22%)
Query: 26 GPKKGSVLKR---------RLVKLVVNFLFYFRTDEAE-PVGALLLERCRVVR------- 68
G +KG + KR + L+ N LFYF +D + P G LLE C R
Sbjct: 23 GTRKGYLSKRSSDNTKWQTKWFALLQNLLFYFESDSSSRPSGLYLLEGCVCDRAPSPKPA 82
Query: 69 -------EEPGTFSISFIEDPERKYHFECSSEEQCQEWMEALRRASY 108
E+ F+++F + ++ + C EW+ A+ ASY
Sbjct: 83 LSAKEPLEKQHYFTVNFSHENQKALELRTEDAKDCDEWVAAIAHASY 129
>gi|115583657 hypothetical protein LOC150368 [Homo sapiens]
Length = 259
Score = 36.2 bits (82), Expect = 0.010
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 1 MRYNEKELQ--ALSRQPAEMAAELGMRG-----PKKGSVLKRRLVKLVVNFLFYFRTDEA 53
M+ NE+ + ALS PA+ L G P +R L N LF F + E
Sbjct: 1 MKLNERSVAHYALSDSPADHMGFLRTWGGPGTPPTPSGTGRRCWFVLKGNLLFSFESREG 60
Query: 54 E-PVGALLLERCRVVREE---PGTFSISFIED-PERKYHFECSSEEQCQE-WMEALRRAS 107
P+ ++LE C V E P F+ + D P + H + QE W++ L RAS
Sbjct: 61 RAPLSLVVLEGCTVELAEAPVPEEFAFAICFDAPGVRPHLLAAEGPAAQEAWVKVLSRAS 120
Query: 108 YEFMR 112
+ +MR
Sbjct: 121 FGYMR 125
>gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens]
Length = 618
Score = 34.3 bits (77), Expect = 0.040
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 36 RLVKLVVNFLFYFRTD-EAEPVGALLLERC-RVVREEPGT-------FSISFIEDPERKY 86
R V + ++YF++ A P GA L RV+R T F I I R +
Sbjct: 106 RFVIIHKRCVYYFKSSTSASPQGAFSLSGYNRVMRAAEETTSNNVFPFKIIHISKKHRTW 165
Query: 87 HFECSSEEQCQEWMEALRR 105
F SSEE+ + WM LRR
Sbjct: 166 FFSASSEEERKSWMALLRR 184
>gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens]
Length = 589
Score = 34.3 bits (77), Expect = 0.040
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 36 RLVKLVVNFLFYFRTD-EAEPVGALLLERC-RVVREEPGT-------FSISFIEDPERKY 86
R V + ++YF++ A P GA L RV+R T F I I R +
Sbjct: 77 RFVIIHKRCVYYFKSSTSASPQGAFSLSGYNRVMRAAEETTSNNVFPFKIIHISKKHRTW 136
Query: 87 HFECSSEEQCQEWMEALRR 105
F SSEE+ + WM LRR
Sbjct: 137 FFSASSEEERKSWMALLRR 155
>gi|170014705 SH3-domain binding protein 2 isoform a [Homo sapiens]
Length = 561
Score = 34.3 bits (77), Expect = 0.040
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 36 RLVKLVVNFLFYFRTD-EAEPVGALLLERC-RVVREEPGT-------FSISFIEDPERKY 86
R V + ++YF++ A P GA L RV+R T F I I R +
Sbjct: 49 RFVIIHKRCVYYFKSSTSASPQGAFSLSGYNRVMRAAEETTSNNVFPFKIIHISKKHRTW 108
Query: 87 HFECSSEEQCQEWMEALRR 105
F SSEE+ + WM LRR
Sbjct: 109 FFSASSEEERKSWMALLRR 127
>gi|170014703 SH3-domain binding protein 2 isoform a [Homo sapiens]
Length = 561
Score = 34.3 bits (77), Expect = 0.040
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 36 RLVKLVVNFLFYFRTD-EAEPVGALLLERC-RVVREEPGT-------FSISFIEDPERKY 86
R V + ++YF++ A P GA L RV+R T F I I R +
Sbjct: 49 RFVIIHKRCVYYFKSSTSASPQGAFSLSGYNRVMRAAEETTSNNVFPFKIIHISKKHRTW 108
Query: 87 HFECSSEEQCQEWMEALRR 105
F SSEE+ + WM LRR
Sbjct: 109 FFSASSEEERKSWMALLRR 127
>gi|206597522 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
isoform b [Homo sapiens]
Length = 961
Score = 34.3 bits (77), Expect = 0.040
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 32 VLKRRLVKLVVNFLFYFRTDEAEPVGALLLERCRVVREEPGTFSISFIEDPERKYHFECS 91
V ++R + FL P L L C+V + P + +R YHF+
Sbjct: 322 VWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQV-KTNPEEKKCFDLISHDRTYHFQAE 380
Query: 92 SEEQCQEWMEALRRASYEFMRRS 114
E++CQ WM L+ + E + +
Sbjct: 381 DEQECQIWMSVLQNSKEEALNNA 403
>gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
isoform a [Homo sapiens]
Length = 1006
Score = 34.3 bits (77), Expect = 0.040
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 32 VLKRRLVKLVVNFLFYFRTDEAEPVGALLLERCRVVREEPGTFSISFIEDPERKYHFECS 91
V ++R + FL P L L C+V + P + +R YHF+
Sbjct: 322 VWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQV-KTNPEEKKCFDLISHDRTYHFQAE 380
Query: 92 SEEQCQEWMEALRRASYEFMRRS 114
E++CQ WM L+ + E + +
Sbjct: 381 DEQECQIWMSVLQNSKEEALNNA 403
>gi|8923763 centaurin-alpha 2 protein [Homo sapiens]
Length = 381
Score = 33.1 bits (74), Expect = 0.089
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 79 IEDPERKYHFECSSEEQCQEWMEALR 104
I PER++ C SE++ QEW+E+LR
Sbjct: 332 IVTPERRFVLTCPSEKEQQEWLESLR 357
>gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens]
Length = 1430
Score = 32.3 bits (72), Expect = 0.15
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 79 IEDPERKYHFECSSEEQCQEWMEALRRASYEFMRRSLIF 117
IE ER + SS + EW+EA+ RA E+ ++ + F
Sbjct: 1154 IESVERSFILSASSATERDEWLEAISRAIEEYAKKRITF 1192
>gi|55770898 Rho GTPase activating protein 25 isoform a [Homo
sapiens]
Length = 645
Score = 32.0 bits (71), Expect = 0.20
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 17/109 (15%)
Query: 15 PAEMAAELGMRGPKKGSVLK---RRLVKLVVNFLFYFRTDE-AEPVGALLLERCRVVR-- 68
P E ++G K+ S++K +R L L+Y++ +E +P G + L C +
Sbjct: 43 PLERPIKMGWL-KKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIA 101
Query: 69 ---EEPGTFSISFIE---DPER----KYHFECSSEEQCQEWMEALRRAS 107
EE G F I D R Y SS+ + +EW++ LRR +
Sbjct: 102 TNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVA 150
>gi|7661882 Rho GTPase activating protein 25 isoform b [Homo
sapiens]
Length = 638
Score = 32.0 bits (71), Expect = 0.20
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 17/109 (15%)
Query: 15 PAEMAAELGMRGPKKGSVLK---RRLVKLVVNFLFYFRTDE-AEPVGALLLERCRVVR-- 68
P E ++G K+ S++K +R L L+Y++ +E +P G + L C +
Sbjct: 36 PLERPIKMGWL-KKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIA 94
Query: 69 ---EEPGTFSISFIE---DPER----KYHFECSSEEQCQEWMEALRRAS 107
EE G F I D R Y SS+ + +EW++ LRR +
Sbjct: 95 TNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVA 143
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 30.8 bits (68), Expect = 0.44
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 84 RKYHFECSSEEQCQEWMEALRRASYEFMRRSLIFYRNEIRKVTGKDPLEQFGISEEARFQ 143
R Y + ++EQ +EAL +A+YE M R L+ N+ T + GI + A F+
Sbjct: 398 RDYVQKAQTKEQADFAIEALAKATYERMFRWLVLRINKALDKTKRQGASFIGILDIAGFE 457
Query: 144 LSGLQA 149
+ L +
Sbjct: 458 IFDLNS 463
>gi|221307473 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
isoform b [Homo sapiens]
Length = 894
Score = 30.4 bits (67), Expect = 0.58
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 55 PVGALLLERCRVVREEPGTFSISFIEDPERKYHFECSSEEQCQEWMEALRRASYEFMRRS 114
P L L C+V R P + R YHF+ E +C+ W+ L+ + E + +
Sbjct: 333 PPVKLTLLTCQV-RPNPEEKKCFDLVTHNRTYHFQAEDEHECEAWVSVLQNSKDEALSSA 391
Query: 115 LI 116
+
Sbjct: 392 FL 393
>gi|19923540 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
isoform a [Homo sapiens]
Length = 903
Score = 30.4 bits (67), Expect = 0.58
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 55 PVGALLLERCRVVREEPGTFSISFIEDPERKYHFECSSEEQCQEWMEALRRASYEFMRRS 114
P L L C+V R P + R YHF+ E +C+ W+ L+ + E + +
Sbjct: 342 PPVKLTLLTCQV-RPNPEEKKCFDLVTHNRTYHFQAEDEHECEAWVSVLQNSKDEALSSA 400
Query: 115 LI 116
+
Sbjct: 401 FL 402
>gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo
sapiens]
Length = 1048
Score = 30.4 bits (67), Expect = 0.58
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 6 KELQALSRQPAEMAAELGMRGPKKGSVLK---RRLVKLVVNFLFYFRTDEAEPV-GALLL 61
K ++ R P + G + S +K +R LV LFY++ ++ E + G++ L
Sbjct: 47 KRSHSMKRNPNAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPL 106
Query: 62 ERCRVVREEPG-------TFSISFIEDPERKYHFECSSEEQCQEWMEALRRAS 107
RV +P TF R Y F S E+ + W++A+ A+
Sbjct: 107 LSFRVAAVQPSDNISRKHTFKAEHAG--VRTYFFSAESPEEQEAWIQAMGEAA 157
>gi|206597515 ArfGAP with RhoGAP domain, ankyrin repeat and PH
domain 1 isoform d [Homo sapiens]
Length = 1133
Score = 29.6 bits (65), Expect = 0.98
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 15 PAEMAAELGMRGPKKGSVLKRRLVKLVVNFLFYFRTDEAEPVGALLLERCRVVREEPGTF 74
P A L P+ + ++R V+L + L YF +++ + C G
Sbjct: 82 PVIKAGWLDKNPPQGSYIYQKRWVRLDTDHLRYFDSNKDAYSKRFISVACISHVAAIGDQ 141
Query: 75 SISFIEDPERKYHFECSSEEQCQEWMEALRRASYEFMRRS 114
I + R + F S+ + +EWM+AL++A E R+
Sbjct: 142 KFEVITN-NRTFAFRAESDVERKEWMQALQQAMAEQRARA 180
>gi|206597513 ArfGAP with RhoGAP domain, ankyrin repeat and PH
domain 1 isoform a [Homo sapiens]
Length = 1205
Score = 29.6 bits (65), Expect = 0.98
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 15 PAEMAAELGMRGPKKGSVLKRRLVKLVVNFLFYFRTDEAEPVGALLLERCRVVREEPGTF 74
P A L P+ + ++R V+L + L YF +++ + C G
Sbjct: 82 PVIKAGWLDKNPPQGSYIYQKRWVRLDTDHLRYFDSNKDAYSKRFISVACISHVAAIGDQ 141
Query: 75 SISFIEDPERKYHFECSSEEQCQEWMEALRRASYEFMRRS 114
I + R + F S+ + +EWM+AL++A E R+
Sbjct: 142 KFEVITN-NRTFAFRAESDVERKEWMQALQQAMAEQRARA 180
>gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain
1 isoform c [Homo sapiens]
Length = 1450
Score = 29.6 bits (65), Expect = 0.98
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 15 PAEMAAELGMRGPKKGSVLKRRLVKLVVNFLFYFRTDEAEPVGALLLERCRVVREEPGTF 74
P A L P+ + ++R V+L + L YF +++ + C G
Sbjct: 327 PVIKAGWLDKNPPQGSYIYQKRWVRLDTDHLRYFDSNKDAYSKRFISVACISHVAAIGDQ 386
Query: 75 SISFIEDPERKYHFECSSEEQCQEWMEALRRASYEFMRRS 114
I + R + F S+ + +EWM+AL++A E R+
Sbjct: 387 KFEVITN-NRTFAFRAESDVERKEWMQALQQAMAEQRARA 425
>gi|6806913 centaurin, alpha 1 [Homo sapiens]
Length = 374
Score = 29.6 bits (65), Expect = 0.98
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 79 IEDPERKYHFECSSEEQCQEWMEALRRA 106
I P+RK+ F C +E +EW+ A ++A
Sbjct: 327 IVTPDRKFLFACETESDQREWVAAFQKA 354
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 28.5 bits (62), Expect = 2.2
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 84 RKYHFECSSEEQCQEWMEALRRASYEFMRRSLIFYRNEIRKVTGKDPLEQFGISEEARFQ 143
R Y + ++EQ +EAL +A+YE + R L+ N+ T + GI + A F+
Sbjct: 405 RDYVQKAQTKEQADFAVEALAKATYERLFRWLVHRINKALDRTKRQGASFIGILDIAGFE 464
Query: 144 LSGLQA 149
+ L +
Sbjct: 465 IFELNS 470
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 27.7 bits (60), Expect = 3.7
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 84 RKYHFECSSEEQCQEWMEALRRASYEFMRRSLIFYRNEIRKVTGKDPLEQFGISEEARFQ 143
R Y + ++EQ +EAL +A+YE + R L+ N + + GI + A F+
Sbjct: 432 RDYVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFE 491
Query: 144 LSGLQA 149
+ L +
Sbjct: 492 IFQLNS 497
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 27.7 bits (60), Expect = 3.7
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 84 RKYHFECSSEEQCQEWMEALRRASYEFMRRSLIFYRNEIRKVTGKDPLEQFGISEEARFQ 143
R Y + ++EQ +EAL +A+YE + R L+ N + + GI + A F+
Sbjct: 424 RDYVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFE 483
Query: 144 LSGLQA 149
+ L +
Sbjct: 484 IFQLNS 489
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 27.7 bits (60), Expect = 3.7
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 84 RKYHFECSSEEQCQEWMEALRRASYEFMRRSLIFYRNEIRKVTGKDPLEQFGISEEARFQ 143
R Y + ++EQ +EAL +A+YE + R L+ N + + GI + A F+
Sbjct: 432 RDYVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFE 491
Query: 144 LSGLQA 149
+ L +
Sbjct: 492 IFQLNS 497
>gi|28626504 fermitin family homolog 3 short form [Homo sapiens]
Length = 663
Score = 27.7 bits (60), Expect = 3.7
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 46 FYFRTDEA--EPVGALLLERCRVVRE---EPGTFSISF-IEDPE--RKYHFECSSEEQCQ 97
+Y DEA +P+ L L+ C VV + F I + PE + + C E+Q
Sbjct: 383 YYKSQDEAPGDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYA 442
Query: 98 EWMEALRRAS 107
WM R AS
Sbjct: 443 RWMAGCRLAS 452
>gi|41281905 fermitin family homolog 3 long form [Homo sapiens]
Length = 667
Score = 27.7 bits (60), Expect = 3.7
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 46 FYFRTDEA--EPVGALLLERCRVVRE---EPGTFSISF-IEDPE--RKYHFECSSEEQCQ 97
+Y DEA +P+ L L+ C VV + F I + PE + + C E+Q
Sbjct: 387 YYKSQDEAPGDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYA 446
Query: 98 EWMEALRRAS 107
WM R AS
Sbjct: 447 RWMAGCRLAS 456
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,528,144
Number of Sequences: 37866
Number of extensions: 220721
Number of successful extensions: 616
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 579
Number of HSP's gapped (non-prelim): 56
length of query: 149
length of database: 18,247,518
effective HSP length: 93
effective length of query: 56
effective length of database: 14,725,980
effective search space: 824654880
effective search space used: 824654880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.