Guide to the Human Genome
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Name: UGT1A1 Sequence: fasta or formatted (533aa) NCBI GI: 8850236
Description:

UDP glycosyltransferase 1 family, polypeptide A1 precursor

Referenced in:

Heme
Xenobiotic Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         37           2
 C cysteine            2.1         11           2
 D aspartate           4.3         23           1
 E glutamate           4.5         24           1
 F phenylalanine       5.1         27           2
 G glycine             5.6         30           2
 H histidine           3.9         21           1
 I isoleucine          4.3         23           1
 K lysine              5.6         30           2
 L leucine            12.0         64           3
 M methionine          3.8         20           2
 N asparagine          3.8         20           2
 P proline             5.8         31           1
 Q glutamine           3.6         19           2
 R arginine            3.8         20           1
 S serine              7.9         42           2
 T threonine           4.1         22           1
 V valine              8.6         46           2
 W tryptophan          1.1          6           1
 Y tyrosine            3.2         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP glycosyltransferase 1 family, polypeptide A1 prec... 
UGT1A3                0.727   UDP glycosyltransferase 1 family, polypeptide A3 pre...
UGT1A5                0.726   UDP glycosyltransferase 1 family, polypeptide A5 pre...
UGT1A4                0.717   UDP glycosyltransferase 1 family, polypeptide A4 prec...
UGT1A6                0.680   UDP glycosyltransferase 1 family, polypeptide A6 iso...
UGT1A9                0.650   UDP glycosyltransferase 1 family, polypeptide A9 pre...
UGT1A8                0.646   UDP glycosyltransferase 1 family, polypeptide A8 pre...
UGT1A10               0.645   UDP glycosyltransferase 1 family, polypeptide A10 pr...
UGT1A7                0.641   UDP glycosyltransferase 1 family, polypeptide A7 pre...
UGT1A6                0.481   UDP glycosyltransferase 1 family, polypeptide A6 iso...
UGT2A1                0.407   UDP glucuronosyltransferase 2 family, polypeptide A...
UGT2A2                0.396   UDP glucuronosyltransferase 2 family, polypeptide A...
UGT2B17               0.394   UDP glucuronosyltransferase 2 family, polypeptide B17...
UGT2A3                0.394   UDP glucuronosyltransferase 2 family, polypeptide A...
UGT2B4                0.392   UDP glucuronosyltransferase 2B4 
UGT2B10               0.391   UDP glucuronosyltransferase 2B10 isoform 1 
UGT2B15               0.384   UDP glycosyltransferase 2B15 
UGT2B7                0.384   UDP glucuronosyltransferase 2B7 
UGT2B28               0.380   UDP glucuronosyltransferase 2 family, polypeptide B2...
UGT2B11               0.378   UDP glucuronosyltransferase 2 family, polypeptide B11...
UGT2B10               0.303   UDP glucuronosyltransferase 2B10 isoform 2 
UGT8                  0.256   UDP-galactose-ceramide galactosyltransferase 8 [Hom...
UGT8                  0.256   UDP-galactose-ceramide galactosyltransferase 8 [Homo...
LOC100294331          0.219   PREDICTED: similar to UDP glucuronosyltransferase 2...
UGT3A2                0.216   UDP glycosyltransferase 3 family, polypeptide A2 [Ho...
UGT3A1                0.210   UDP glycosyltransferase 3 family, polypeptide A1 [Ho...
LOC100291758          0.108   PREDICTED: similar to UDP-glucuronosyltransferase 2...
LOC100289734          0.108   PREDICTED: hypothetical protein XP_002346669 
NPR2                  0.009   natriuretic peptide receptor B precursor 
NPR1                  0.007   natriuretic peptide receptor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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