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Search of human proteins with 8850232
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8850232 protocadherin gamma subfamily A, 12 isoform 1
precursor [Homo sapiens]
(932 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs... 1840 0.0
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur... 1586 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 1417 0.0
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur... 1400 0.0
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs... 1376 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 1372 0.0
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 1371 0.0
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 1368 0.0
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs... 1367 0.0
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs... 1357 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 1353 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 1349 0.0
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs... 1335 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 1164 0.0
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur... 1152 0.0
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs... 1122 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 1120 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 1118 0.0
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs... 1116 0.0
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 1115 0.0
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso... 1107 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 1103 0.0
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 1095 0.0
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs... 1086 0.0
gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precurs... 954 0.0
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 934 0.0
gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs... 929 0.0
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs... 925 0.0
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs... 923 0.0
gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precurs... 922 0.0
>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1840 bits (4767), Expect = 0.0
Identities = 932/932 (100%), Positives = 932/932 (100%)
Query: 1 MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60
MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA
Sbjct: 1 MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60
Query: 61 ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120
ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE
Sbjct: 61 ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120
Query: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180
VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL
Sbjct: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180
Query: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240
IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP
Sbjct: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240
Query: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300
AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT
Sbjct: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300
Query: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360
ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS
Sbjct: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360
Query: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420
PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI
Sbjct: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420
Query: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480
TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD
Sbjct: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480
Query: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540
CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP
Sbjct: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720
TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH
Sbjct: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720
Query: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780
KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV
Sbjct: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780
Query: 781 SQESFEKSEPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
SQESFEKSEPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQESFEKSEPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1586 bits (4107), Expect = 0.0
Identities = 808/808 (100%), Positives = 808/808 (100%)
Query: 1 MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60
MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA
Sbjct: 1 MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60
Query: 61 ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120
ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE
Sbjct: 61 ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120
Query: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180
VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL
Sbjct: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180
Query: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240
IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP
Sbjct: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240
Query: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300
AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT
Sbjct: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300
Query: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360
ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS
Sbjct: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360
Query: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420
PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI
Sbjct: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420
Query: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480
TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD
Sbjct: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480
Query: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540
CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP
Sbjct: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720
TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH
Sbjct: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720
Query: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780
KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV
Sbjct: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780
Query: 781 SQESFEKSEPLLLSGDSVFSKDSHGLIE 808
SQESFEKSEPLLLSGDSVFSKDSHGLIE
Sbjct: 781 SQESFEKSEPLLLSGDSVFSKDSHGLIE 808
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 1417 bits (3669), Expect = 0.0
Identities = 720/925 (77%), Positives = 789/925 (85%)
Query: 8 RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67
+D GLVLL + G WE G QI YS+PEELEKGS VG+IS+DLGL PRELAERGVRI+
Sbjct: 12 KDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIV 71
Query: 68 PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127
RGRTQLF+LNPRSGSL+TAGRIDREELC + +C ++ +IL+ED+VK++G+E+EV DIN
Sbjct: 72 SRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIN 131
Query: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187
DNAP F+ L++KI+EN A MRFPLP A DPD+G NSLQSY+LSPN HFSL VQ+ A+
Sbjct: 132 DNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRAN 191
Query: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247
G KYPELVL+ +LDREE+A HHLVLTASDGGDP+R+GT + V V DANDNAP F PEY
Sbjct: 192 GVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEY 251
Query: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307
R SVPENL +GTQLL V ATD DEG N EV YSFR + D F+L+ +G I L
Sbjct: 252 RVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENL 311
Query: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367
D+EE+GFY++E+QA D Y A AKVLITV DVNDN+PE+ +TSL S V E+SP GT++A
Sbjct: 312 DYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVA 371
Query: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427
LLNV+D DSE+NGQV C I LPFKLEKS +YY LV LDREQV SYNITVTATD
Sbjct: 372 LLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDG 431
Query: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487
G+PPLSTE H L VAD NDNPP F Q SY YIPENN RG S+ SVTA DPD +ENAQI
Sbjct: 432 GSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQI 491
Query: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547
YSLAE+TIQG LSSY+SINSDTGVLYAL SFDYEQF +LQ++V A D+G PPLSSNVS
Sbjct: 492 IYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVS 551
Query: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 552 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 611
Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
LLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS
Sbjct: 612 LLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 671
Query: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727
IPQVLADLGS ESPANSETSDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQA
Sbjct: 672 IPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQA 731
Query: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
SGGGLTG SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 732 SGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 791
Query: 788 SEPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 847
++PL L DS F + L+ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM
Sbjct: 792 NDPLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 851
Query: 848 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 907
LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA
Sbjct: 852 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 911
Query: 908 AGKRDGKAPAGGNGNKKKSGKKEKK 932
AGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 912 AGKRDGKAPAGGNGNKKKSGKKEKK 936
>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
[Homo sapiens]
Length = 935
Score = 1400 bits (3624), Expect = 0.0
Identities = 706/922 (76%), Positives = 796/922 (86%), Gaps = 2/922 (0%)
Query: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
L+LL I LGTL QIRYSVPEE EKGS VG+IS+DLGLEPRELA+RGVRI+ RG+T
Sbjct: 14 LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73
Query: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
QLFA+NPRSGSL+TAGRIDREELC C LN+++L+ED +KIYGVEVE+ DINDNAP
Sbjct: 74 QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133
Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
F+E E+EIK+SE+A RF LP+A DPD+G NSLQSY+LSPN +FSL ++ DG+K P
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193
Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
ELVL+ +LDRE++AAH L+LTA DGGDP+R G IRV+VLD ND+ P F Q YR SVP
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253
Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
EN++ GT++L+VNATDPDEG+N EV YSFR ++ KA+++F+LD +G + G LD E+
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313
Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
FY+ME+Q D G +LITV+DVNDNAPE+ +TS +S+ ENSP GT+IALLNV
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373
Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
DQDS ENGQV CFI +LPFKLEK+YGNYY L+T VLDRE V SYNIT+TATD+G+PPL
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433
Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
S ETH+ LNVAD NDNPPVFP +SYSAYIPENNPRG S+ SVTA DPD ++NA +TYSL
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493
Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
++T+QG LSSYVSINS+TGVLYAL SFDYEQFRDL+++V+ARD+G PPLSSNVSLSLFV
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP+VL
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673
Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
ADLGSLES ANSETSDL+LYLVVAVAAVSC+FL FVI+LLALRL RWHKSRLLQAS GGL
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733
Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
G P SHFVGVDGVQAFLQTYSHEVSL DS+KSHLIFPQPNY D L+SQES EKSEPLL
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793
Query: 793 LSGDS--VFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 850
++ DS + K +QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA
Sbjct: 794 IAEDSAIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 853
Query: 851 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 910
MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK
Sbjct: 854 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 913
Query: 911 RDGKAPAGGNGNKKKSGKKEKK 932
RDGKAPAGGNGNKKKSGKKEKK
Sbjct: 914 RDGKAPAGGNGNKKKSGKKEKK 935
>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1376 bits (3562), Expect = 0.0
Identities = 697/925 (75%), Positives = 786/925 (84%)
Query: 8 RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67
R+ +GL LL LLGTL ETG QIRYSV EEL+KGS VG+I+ DLGLEPRELAERGVRI+
Sbjct: 8 RNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIV 67
Query: 68 PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127
RGRTQLF+LNP+SGSLVTA RIDREELC C + ++IL+EDK+KI+ VE+E++DIN
Sbjct: 68 SRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDIN 127
Query: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187
DNAP F ELEIKI E RFP+ A+DPD+G NSLQ+Y+LSPN +FSL V + ++
Sbjct: 128 DNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSE 187
Query: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247
G+KYPELVL+RALDRE+K H LVL ASDGGDPV +G I+V+VLDANDN P F QPEY
Sbjct: 188 GAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEY 247
Query: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307
R SV EN+ +GT+LL VNATDPDEG NA+V Y + K A++F L+ SG +S + L
Sbjct: 248 RVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSL 307
Query: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367
D+E++ FY+++++A D G +RAK+L+TVLDVNDNAPE+ +TSL SSVPE G IA
Sbjct: 308 DYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIA 367
Query: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427
L++V+D+DS +NGQV F+ GNLPFKLEKS YY LVT LDREQ+ YNI++ A+D
Sbjct: 368 LIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDG 427
Query: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487
G+PPLSTETHI+L+V D NDNPP FP SYSAYIPENNPRG S+ SVTA DPD NA+I
Sbjct: 428 GSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARI 487
Query: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547
TY+L E+T+QGA LSS+VSINS+TGVLYAL SFDYEQFRDL++ V A D+G+PPLSSNVS
Sbjct: 488 TYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVS 547
Query: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
L+LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 548 LNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD
Sbjct: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADR 667
Query: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727
IP +LADLGSLE A SDLTLYLVVAVAAVSCVFLAFVI+LLALRLRRWHKSRLLQA
Sbjct: 668 IPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQA 727
Query: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
SGGGL P SHFVG DGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 728 SGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787
Query: 788 SEPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 847
SEPLL++ D + K L++QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM
Sbjct: 788 SEPLLITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 847
Query: 848 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 907
LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA
Sbjct: 848 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 907
Query: 908 AGKRDGKAPAGGNGNKKKSGKKEKK 932
AGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 908 AGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1372 bits (3552), Expect = 0.0
Identities = 696/924 (75%), Positives = 779/924 (84%)
Query: 9 DYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIP 68
DY+G LL ILLGT WE +I YSV EE +KGS VGDI++DLGLEPRELAERGVRII
Sbjct: 9 DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68
Query: 69 RGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIND 128
RGRTQLFALN RSGSLVTAGRIDREE+C + +C +N +ILMEDK+ +Y ++VE+ DIND
Sbjct: 69 RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128
Query: 129 NAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADG 188
N P F E+ +KI EN A +RFPL A DPD+G NSLQSY+LSPN HFSL VQ+G D
Sbjct: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188
Query: 189 SKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYR 248
+KYPELVL+R LDREE+ HHLVLTASDGGDP R+ TA I+V V+D ND+ P F+ P+Y+
Sbjct: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248
Query: 249 ASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELD 308
+VPEN+ +GT+LL V+A D DEGVN EV YSFR + K ++F L+ +G IST+ LD
Sbjct: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308
Query: 309 HEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIAL 368
+EE+ FY+MEVQA D G +AKVLITVLDVNDNAPEV +TSL+SS+PE++P GT+IAL
Sbjct: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368
Query: 369 LNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRG 428
+ D+DS +NG+V C I NLPFKLEKS NYY LVT LDRE + YNIT+ ATD G
Sbjct: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428
Query: 429 TPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQIT 488
TPPLS ETHI + VADTNDNPP FP +SYS YI ENNPRG S+ VTA D D E+NAQIT
Sbjct: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488
Query: 489 YSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSL 548
YSLAE+TIQGA +SSYVSINSDTGVLYAL SFDYEQ R+LQ++V A D+G PPLSSN+SL
Sbjct: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548
Query: 549 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608
Query: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
LKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
Query: 669 PQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQAS 728
P+VLADLGSLE DLTLYLVVAVA VSCVFLAFV++LLALRLRRWHKSRLLQAS
Sbjct: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728
Query: 729 GGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKS 788
GGL P SHFVG+DGVQAFLQTYSHEVSLT DSRKSHLIFPQPNY DML+SQES EK+
Sbjct: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788
Query: 789 EPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 848
+ LL S D K++ I+QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML
Sbjct: 789 DSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 848
Query: 849 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 908
QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA
Sbjct: 849 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 908
Query: 909 GKRDGKAPAGGNGNKKKSGKKEKK 932
GKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 909 GKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1371 bits (3548), Expect = 0.0
Identities = 698/932 (74%), Positives = 783/932 (84%)
Query: 1 MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60
M P + H VLL LLGTLW QIRYS+PEELEKGS VG+I +DLGLEP+ELA
Sbjct: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
Query: 61 ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120
E GVRI+ RGR QLF+LNPR+GSLVTAGRIDREELC + +C ++ +IL+EDK+ +Y VE
Sbjct: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
Query: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180
VE+ DINDN P F + ELE+KI ENAA RFPL +DPD+G NSLQ ++LS N+HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
Query: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240
VQ+ A G KYPELVL+ LDRE +A + LVLTA DGGDPVR+ A+I V VLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
Query: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300
F QP YR SVPENL +GT +L V ATD DEGV+ EV YSF + +K +Q+F L+ +G
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
Query: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360
IST LD+E+S FY++ V+A D G RAKVLIT+LDVNDN PEVV+TS + ++ E++
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
Query: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420
P GT+IAL V D+DS NG V C I +LPF+LEKS GNYY LVT+ LDRE+V YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
Query: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480
TVTATD+GTPPLSTET ISLNVADTNDNPP FP +SYS Y+ ENNPRG S+ SV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
Query: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540
++NAQ++YSLAE+T+QGA LSSYVSINSDTG+LYAL SFDYEQ RDLQ+ V A D+G P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720
TVAVAD IP +LADLGSLE A SDLTLYLVVAVAAVSCVFLAFVI+LLALRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
Query: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780
KSRLLQASGGGL P SHFVGV+GV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQESFEKSEPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
+QES+EKSEPLL++ D + +K ++QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1368 bits (3541), Expect = 0.0
Identities = 695/920 (75%), Positives = 781/920 (84%), Gaps = 1/920 (0%)
Query: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
L+L +LLGTL E G QIRYS+PEEL+KGS VG+I++DLGLEP+ELAERGVRI+ RGRT
Sbjct: 13 LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
QLFALNPRSGSLVTAGRIDREELC + C +N +IL+E+K+KIYGVEVE+ DINDN P
Sbjct: 73 QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
FR+ EL++K++ENAA R LP A D D+G NSL+SY+LS N HFSL V +G DG KYP
Sbjct: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
ELVL++ LDRE++ H L+LTA DGGDPV +GT IRV VLDANDNAP F EY SVP
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
EN+ +GT+LL++ ATDPDEG+N ++ YSFR ++K ++ F+LD N G IST+ LD+EES
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
FY MEV A D A AKV++TV DVNDNAPEV+LTSL SS+ E+ GT+IAL +V+
Sbjct: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
D DS ENG++ C I NLPFKLEKS NYY L+T LDRE+ YNIT+T D GTPPL
Sbjct: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
STE+HI L VAD NDNPP FPQASYS + ENNPRGVS+ SVTAHDPD +NA++TYSLA
Sbjct: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
E+T QGA LSSYVSINSDTGVLYAL SFDYEQ RDLQ+ V A D+G+PPLSSNVSLSLFV
Sbjct: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP +L
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
ADLGS+++P + E DLTLYLVVAVAAVSCVFLAFVI+LL LRLRRWHKSRLLQA G L
Sbjct: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
G PASHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+S+ES EKSEPLL
Sbjct: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
Query: 793 LSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
+S D V + ++QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 MS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 851
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 852 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 911
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 912 GKAPAGGNGNKKKSGKKEKK 931
>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1367 bits (3537), Expect = 0.0
Identities = 700/930 (75%), Positives = 784/930 (84%), Gaps = 3/930 (0%)
Query: 3 PARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAER 62
PAR D+ L+ + +LLG L E QI YSV EE E+GS VG+I++DLGL PRELAER
Sbjct: 5 PAR--PDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAER 62
Query: 63 GVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVE 122
GVRI+ RGRTQLFALNPRSG+LVTAGRIDREELC + C NL+IL+ED VKI VEVE
Sbjct: 63 GVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVE 122
Query: 123 VRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIV 182
+ D+NDN P F + EIK++EN RFPLP A+DPD+G NSLQ Y+L+ N +FSL V
Sbjct: 123 IIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDV 182
Query: 183 QNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAF 242
Q+GADG KYPELVL+RALDREE+A HHLVLTA DGGDPVR+GTARI ++++D NDNAP F
Sbjct: 183 QSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVF 242
Query: 243 AQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTIS 302
QPEY SV EN+ +GT+LL V ATDPDEG N +V YSFR V DK +Q+F+L+ SG I+
Sbjct: 243 TQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDIT 302
Query: 303 TIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPR 362
+G LD+E+SGFY ++V+A D G AR+KVL+TVLD NDNAPEV +TSL SSV E+S
Sbjct: 303 ILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSP 362
Query: 363 GTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITV 422
GT+IAL NV+D DS NG V C I NLPF LEK+YGNYY L+T LDRE+V YNITV
Sbjct: 363 GTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITV 422
Query: 423 TATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCE 482
TATD+GTPPLSTETHISL V D NDNPP FP ASYSAYIPENNPRG S++S+TA DPD
Sbjct: 423 TATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSG 482
Query: 483 ENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPL 542
+NA+ITYSLAE+T QGA LSSYVSINS+TG+LYAL SFDYEQFRDLQ+ + A D+G PPL
Sbjct: 483 DNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPL 542
Query: 543 SSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNA 602
SSNVSLSLFVLDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQNA
Sbjct: 543 SSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNA 602
Query: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
WLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTV
Sbjct: 603 WLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTV 662
Query: 663 AVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKS 722
AVADSIP VLADLGSL+ A+ + S LTLYLVVAVAAVSCVFLAFV +LLAL+LRRWHKS
Sbjct: 663 AVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKS 722
Query: 723 RLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQ 782
RLL A G L G PASHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIF QP+YAD L+S+
Sbjct: 723 RLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISR 782
Query: 783 ESFEKSEPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ 842
ES EKSEPLL++ D + +K L +QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ
Sbjct: 783 ESCEKSEPLLITQDLLETKGDPNL-QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ 841
Query: 843 FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA 902
FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA
Sbjct: 842 FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA 901
Query: 903 TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 902 TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1357 bits (3511), Expect = 0.0
Identities = 692/920 (75%), Positives = 775/920 (84%)
Query: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
L+LL LLGTLWE G QIRYSVPEE +KGS VG+IS+DLGL+PR+LA+ GVRI+ RGRT
Sbjct: 13 LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
QLFALNPRSGSL+TAGRIDREELC + +C +N++ L+EDK K++GVE+E+ DINDN P
Sbjct: 73 QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
F+ +LE+KI+E A R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+ P
Sbjct: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
ELVL+RALDREE+AAHHLVLTASDGG P R+ T RI V VLD NDNAP F P YR V
Sbjct: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
EN+ GT+LL V A+DPDEG+N +V Y FR +++K +F+L+ N+G IS LD+EE
Sbjct: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
FY+ME+QA D R K+LI+V DVNDN PEV++TSL S V ENS GT+IA L+V+
Sbjct: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
DQDS +NGQV+C+ + NLPFKLEKS GNYY LVT LDRE V YNITV A+D GTPPL
Sbjct: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
STET I+L+VAD NDNPP FP ASYSAYI ENN RG S+ S+TAHDPD +ENAQ+TYS+
Sbjct: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQ+ V A D+G PPLSSN+SLSLFV
Sbjct: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP+VL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
+LGSL+ + S LTLYLVVAVAA+SCVFLAFV +LL LRLRRWHKSRLLQ SGG L
Sbjct: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
G PASHFVGV+ VQAFLQTYS EVSLT DSRKSHLIFPQPNYADML+SQE EK++ LL
Sbjct: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
Query: 793 LSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
S D K+ +QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 TSVDFHEYKNEADHGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1353 bits (3501), Expect = 0.0
Identities = 692/920 (75%), Positives = 766/920 (83%), Gaps = 1/920 (0%)
Query: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
L+LL + L L E G I YSVPEE +KGS VG+I++DLGL+P+ELA+ GVRI+ RGR
Sbjct: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
LFALNPRSGSL+TA RIDREELC ++ C ++ +IL+EDK+K++ VEVE+ DINDN P
Sbjct: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
F+ ELE K++E R LP D D+G NSLQSY+LS N HFSL VQ GADG ++P
Sbjct: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
E+VL+ LDREE+A HHL+LTASDGG+PVR+GT RI + V+DANDN PAF Q +Y +VP
Sbjct: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
EN+ LGTQLL+VNATDPDEG N EV YSF VD + AQ+F+LD +G IS LD EE
Sbjct: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
Y MEVQA D AG A+ KVLI VLDVNDNAPEV +TS+ ++VPEN P GT+IAL++V+
Sbjct: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
DQDS +NG CFI GNLPFKLEK NYY LVT+ LDRE + YNIT+TA D+GTP L
Sbjct: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
STETHISL V D NDN PVF Q SYSAYIPENNPRG S+ SV AHD D ENAQITYSL
Sbjct: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
E+TIQGA LS+Y+SINSDTGVLYAL SFDYEQFRD+Q+KVMARD+G PPLSSNVSLSLF+
Sbjct: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
ADLGSLE A SDLTLYLVVA AAVSCVFLAFVI+LLA RLRRWHKSRLLQASGGGL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
P SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK + L
Sbjct: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK-KGFL 791
Query: 793 LSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
+ S+ +QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 792 SAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 851
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 852 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 911
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 912 GKAPAGGNGNKKKSGKKEKK 931
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1349 bits (3491), Expect = 0.0
Identities = 685/920 (74%), Positives = 767/920 (83%)
Query: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
LVLL LLG LWE +QIRYSVPEE EKG VG+IS+DL LEPRELAER VRI+ RGRT
Sbjct: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
QLF+LNPRSG+LVTAGRIDREELC + +C +N +L+ED+VK+YG+E+EV DIND+AP
Sbjct: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
F+ LE+KI+E A R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+ P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
ELVL+RALDREE AHHLVLTASDGG+P R+ T RI V VLD NDNAP FAQ YR V
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
EN+ GT LL A+D DEG+N +V Y F +++K + +F+L+ N+G IST LD+EE
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
FY+ME+QA D G KVLI+V DVNDN PEV +TSL S V E++P+GT+I L N +
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
D+DS +NGQV+C IQ NL F LE S +YY L+T +LDRE+ YNITVTATDRGTPPL
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
STE HI+L V D NDNPP F QASYS Y+PENN RG S+ SV A+DPD EN+++ YSLA
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
E+TIQG+ LS+YVSINSDTGVLYAL SFDYEQFRDLQ++V A D+G PPLSSNVSL LFV
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
ADLGSL+ PA+ E SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+ GL
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
G P SHFVGVDGV+AFLQTYS E SLT DSRKSHLIFPQPNYAD L+SQ+S EK+EPL
Sbjct: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
Query: 793 LSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
+S DS F + L+ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 VSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932
>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1335 bits (3455), Expect = 0.0
Identities = 680/920 (73%), Positives = 760/920 (82%)
Query: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
LVLL LL TLWE QIRYSV EE+++GS VG+I++DLGLEP LAE+GVRI+ RGR+
Sbjct: 13 LVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRS 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
QLFALNPRSGSLVTA RIDREELC + C LN +IL+EDK+ IY VEVE+ DINDNAP
Sbjct: 73 QLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPR 132
Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
F ELE+KISE R PL +A D D+G+N+LQ Y L+PN HFSL V+ GADG+KYP
Sbjct: 133 FGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYP 192
Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
ELVL+R+LDREE+A HHLVL ASDGGDPV +GT+RI V VLDANDNAP F QPEYR S+P
Sbjct: 193 ELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIP 252
Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
EN +GT++L V ATD DEG A+V Y + ++VF+L SG ++ I +LD+E++
Sbjct: 253 ENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDA 312
Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
F++++++A D G RAKV++TVLDVNDNAPE +TS SSV E+S GT+I L NV+
Sbjct: 313 TFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVH 372
Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
D+DS +N C + +LPFKLEKS NYY LVT LDREQ YNIT+TA D G P L
Sbjct: 373 DRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSL 432
Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
ST+ HI L VAD NDN P F + SYS YIPENNPRG S+ SVTAHDPD +NA +TYS A
Sbjct: 433 STDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFA 492
Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQV V+ARD+G+PPLSSNVSLSLFV
Sbjct: 493 EDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LLKAS
Sbjct: 553 LDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVAD IP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDIL 672
Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
ADLGSLE A SDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQASGG L
Sbjct: 673 ADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGSL 732
Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
TG +SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK + L
Sbjct: 733 TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKDFLS 792
Query: 793 LSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
+ + +QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 APQSLLEEEREETFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 1164 bits (3010), Expect = 0.0
Identities = 596/800 (74%), Positives = 665/800 (83%)
Query: 8 RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67
+D GLVLL + G WE G QI YS+PEELEKGS VG+IS+DLGL PRELAERGVRI+
Sbjct: 12 KDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIV 71
Query: 68 PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127
RGRTQLF+LNPRSGSL+TAGRIDREELC + +C ++ +IL+ED+VK++G+E+EV DIN
Sbjct: 72 SRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIN 131
Query: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187
DNAP F+ L++KI+EN A MRFPLP A DPD+G NSLQSY+LSPN HFSL VQ+ A+
Sbjct: 132 DNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRAN 191
Query: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247
G KYPELVL+ +LDREE+A HHLVLTASDGGDP+R+GT + V V DANDNAP F PEY
Sbjct: 192 GVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEY 251
Query: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307
R SVPENL +GTQLL V ATD DEG N EV YSFR + D F+L+ +G I L
Sbjct: 252 RVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENL 311
Query: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367
D+EE+GFY++E+QA D Y A AKVLITV DVNDN+PE+ +TSL S V E+SP GT++A
Sbjct: 312 DYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVA 371
Query: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427
LLNV+D DSE+NGQV C I LPFKLEKS +YY LV LDREQV SYNITVTATD
Sbjct: 372 LLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDG 431
Query: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487
G+PPLSTE H L VAD NDNPP F Q SY YIPENN RG S+ SVTA DPD +ENAQI
Sbjct: 432 GSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQI 491
Query: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547
YSLAE+TIQG LSSY+SINSDTGVLYAL SFDYEQF +LQ++V A D+G PPLSSNVS
Sbjct: 492 IYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVS 551
Query: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 552 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 611
Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
LLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS
Sbjct: 612 LLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 671
Query: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727
IPQVLADLGS ESPANSETSDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQA
Sbjct: 672 IPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQA 731
Query: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
SGGGLTG SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 732 SGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 791
Query: 788 SEPLLLSGDSVFSKDSHGLI 807
++PL L DS F + L+
Sbjct: 792 NDPLSLLDDSKFPIEDTPLV 811
>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
[Homo sapiens]
Length = 837
Score = 1152 bits (2979), Expect = 0.0
Identities = 581/785 (74%), Positives = 669/785 (85%)
Query: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
L+LL I LGTL QIRYSVPEE EKGS VG+IS+DLGLEPRELA+RGVRI+ RG+T
Sbjct: 14 LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73
Query: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
QLFA+NPRSGSL+TAGRIDREELC C LN+++L+ED +KIYGVEVE+ DINDNAP
Sbjct: 74 QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133
Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
F+E E+EIK+SE+A RF LP+A DPD+G NSLQSY+LSPN +FSL ++ DG+K P
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193
Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
ELVL+ +LDRE++AAH L+LTA DGGDP+R G IRV+VLD ND+ P F Q YR SVP
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253
Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
EN++ GT++L+VNATDPDEG+N EV YSFR ++ KA+++F+LD +G + G LD E+
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313
Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
FY+ME+Q D G +LITV+DVNDNAPE+ +TS +S+ ENSP GT+IALLNV
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373
Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
DQDS ENGQV CFI +LPFKLEK+YGNYY L+T VLDRE V SYNIT+TATD+G+PPL
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433
Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
S ETH+ LNVAD NDNPPVFP +SYSAYIPENNPRG S+ SVTA DPD ++NA +TYSL
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493
Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
++T+QG LSSYVSINS+TGVLYAL SFDYEQFRDL+++V+ARD+G PPLSSNVSLSLFV
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP+VL
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673
Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
ADLGSLES ANSETSDL+LYLVVAVAAVSC+FL FVI+LLALRL RWHKSRLLQAS GGL
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733
Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
G P SHFVGVDGVQAFLQTYSHEVSL DS+KSHLIFPQPNY D L+SQES EKSEPLL
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793
Query: 793 LSGDS 797
++ DS
Sbjct: 794 IAEDS 798
>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
[Homo sapiens]
Length = 829
Score = 1122 bits (2902), Expect = 0.0
Identities = 573/801 (71%), Positives = 662/801 (82%)
Query: 8 RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67
R+ +GL LL LLGTL ETG QIRYSV EEL+KGS VG+I+ DLGLEPRELAERGVRI+
Sbjct: 8 RNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIV 67
Query: 68 PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127
RGRTQLF+LNP+SGSLVTA RIDREELC C + ++IL+EDK+KI+ VE+E++DIN
Sbjct: 68 SRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDIN 127
Query: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187
DNAP F ELEIKI E RFP+ A+DPD+G NSLQ+Y+LSPN +FSL V + ++
Sbjct: 128 DNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSE 187
Query: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247
G+KYPELVL+RALDRE+K H LVL ASDGGDPV +G I+V+VLDANDN P F QPEY
Sbjct: 188 GAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEY 247
Query: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307
R SV EN+ +GT+LL VNATDPDEG NA+V Y + K A++F L+ SG +S + L
Sbjct: 248 RVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSL 307
Query: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367
D+E++ FY+++++A D G +RAK+L+TVLDVNDNAPE+ +TSL SSVPE G IA
Sbjct: 308 DYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIA 367
Query: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427
L++V+D+DS +NGQV F+ GNLPFKLEKS YY LVT LDREQ+ YNI++ A+D
Sbjct: 368 LIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDG 427
Query: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487
G+PPLSTETHI+L+V D NDNPP FP SYSAYIPENNPRG S+ SVTA DPD NA+I
Sbjct: 428 GSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARI 487
Query: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547
TY+L E+T+QGA LSS+VSINS+TGVLYAL SFDYEQFRDL++ V A D+G+PPLSSNVS
Sbjct: 488 TYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVS 547
Query: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
L+LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 548 LNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD
Sbjct: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADR 667
Query: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727
IP +LADLGSLE A SDLTLYLVVAVAAVSCVFLAFVI+LLALRLRRWHKSRLLQA
Sbjct: 668 IPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQA 727
Query: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
SGGGL P SHFVG DGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 728 SGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787
Query: 788 SEPLLLSGDSVFSKDSHGLIE 808
SEPLL++ D + K L++
Sbjct: 788 SEPLLITQDLLEMKGDSNLLQ 808
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 1120 bits (2898), Expect = 0.0
Identities = 573/803 (71%), Positives = 657/803 (81%)
Query: 9 DYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIP 68
DY+G LL ILLGT WE +I YSV EE +KGS VGDI++DLGLEPRELAERGVRII
Sbjct: 9 DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68
Query: 69 RGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIND 128
RGRTQLFALN RSGSLVTAGRIDREE+C + +C +N +ILMEDK+ +Y ++VE+ DIND
Sbjct: 69 RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128
Query: 129 NAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADG 188
N P F E+ +KI EN A +RFPL A DPD+G NSLQSY+LSPN HFSL VQ+G D
Sbjct: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188
Query: 189 SKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYR 248
+KYPELVL+R LDREE+ HHLVLTASDGGDP R+ TA I+V V+D ND+ P F+ P+Y+
Sbjct: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248
Query: 249 ASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELD 308
+VPEN+ +GT+LL V+A D DEGVN EV YSFR + K ++F L+ +G IST+ LD
Sbjct: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308
Query: 309 HEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIAL 368
+EE+ FY+MEVQA D G +AKVLITVLDVNDNAPEV +TSL+SS+PE++P GT+IAL
Sbjct: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368
Query: 369 LNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRG 428
+ D+DS +NG+V C I NLPFKLEKS NYY LVT LDRE + YNIT+ ATD G
Sbjct: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428
Query: 429 TPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQIT 488
TPPLS ETHI + VADTNDNPP FP +SYS YI ENNPRG S+ VTA D D E+NAQIT
Sbjct: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488
Query: 489 YSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSL 548
YSLAE+TIQGA +SSYVSINSDTGVLYAL SFDYEQ R+LQ++V A D+G PPLSSN+SL
Sbjct: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548
Query: 549 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608
Query: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
LKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
Query: 669 PQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQAS 728
P+VLADLGSLE DLTLYLVVAVA VSCVFLAFV++LLALRLRRWHKSRLLQAS
Sbjct: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728
Query: 729 GGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKS 788
GGL P SHFVG+DGVQAFLQTYSHEVSLT DSRKSHLIFPQPNY DML+SQES EK+
Sbjct: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788
Query: 789 EPLLLSGDSVFSKDSHGLIEQAP 811
+ LL S D K++ I+ +P
Sbjct: 789 DSLLTSVDFQECKENLPSIQVSP 811
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 1118 bits (2891), Expect = 0.0
Identities = 574/801 (71%), Positives = 657/801 (82%)
Query: 1 MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60
M P + H VLL LLGTLW QIRYS+PEELEKGS VG+I +DLGLEP+ELA
Sbjct: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
Query: 61 ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120
E GVRI+ RGR QLF+LNPR+GSLVTAGRIDREELC + +C ++ +IL+EDK+ +Y VE
Sbjct: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
Query: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180
VE+ DINDN P F + ELE+KI ENAA RFPL +DPD+G NSLQ ++LS N+HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
Query: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240
VQ+ A G KYPELVL+ LDRE +A + LVLTA DGGDPVR+ A+I V VLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
Query: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300
F QP YR SVPENL +GT +L V ATD DEGV+ EV YSF + +K +Q+F L+ +G
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
Query: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360
IST LD+E+S FY++ V+A D G RAKVLIT+LDVNDN PEVV+TS + ++ E++
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
Query: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420
P GT+IAL V D+DS NG V C I +LPF+LEKS GNYY LVT+ LDRE+V YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
Query: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480
TVTATD+GTPPLSTET ISLNVADTNDNPP FP +SYS Y+ ENNPRG S+ SV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
Query: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540
++NAQ++YSLAE+T+QGA LSSYVSINSDTG+LYAL SFDYEQ RDLQ+ V A D+G P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720
TVAVAD IP +LADLGSLE A SDLTLYLVVAVAAVSCVFLAFVI+LLALRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
Query: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780
KSRLLQASGGGL P SHFVGV+GV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQESFEKSEPLLLSGDSVFSK 801
+QES+EKSEPLL++ D + +K
Sbjct: 781 NQESYEKSEPLLITQDLLETK 801
>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1116 bits (2887), Expect = 0.0
Identities = 576/804 (71%), Positives = 659/804 (81%), Gaps = 2/804 (0%)
Query: 3 PARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAER 62
PAR D+ L+ + +LLG L E QI YSV EE E+GS VG+I++DLGL PRELAER
Sbjct: 5 PAR--PDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAER 62
Query: 63 GVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVE 122
GVRI+ RGRTQLFALNPRSG+LVTAGRIDREELC + C NL+IL+ED VKI VEVE
Sbjct: 63 GVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVE 122
Query: 123 VRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIV 182
+ D+NDN P F + EIK++EN RFPLP A+DPD+G NSLQ Y+L+ N +FSL V
Sbjct: 123 IIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDV 182
Query: 183 QNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAF 242
Q+GADG KYPELVL+RALDREE+A HHLVLTA DGGDPVR+GTARI ++++D NDNAP F
Sbjct: 183 QSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVF 242
Query: 243 AQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTIS 302
QPEY SV EN+ +GT+LL V ATDPDEG N +V YSFR V DK +Q+F+L+ SG I+
Sbjct: 243 TQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDIT 302
Query: 303 TIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPR 362
+G LD+E+SGFY ++V+A D G AR+KVL+TVLD NDNAPEV +TSL SSV E+S
Sbjct: 303 ILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSP 362
Query: 363 GTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITV 422
GT+IAL NV+D DS NG V C I NLPF LEK+YGNYY L+T LDRE+V YNITV
Sbjct: 363 GTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITV 422
Query: 423 TATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCE 482
TATD+GTPPLSTETHISL V D NDNPP FP ASYSAYIPENNPRG S++S+TA DPD
Sbjct: 423 TATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSG 482
Query: 483 ENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPL 542
+NA+ITYSLAE+T QGA LSSYVSINS+TG+LYAL SFDYEQFRDLQ+ + A D+G PPL
Sbjct: 483 DNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPL 542
Query: 543 SSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNA 602
SSNVSLSLFVLDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQNA
Sbjct: 543 SSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNA 602
Query: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
WLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTV
Sbjct: 603 WLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTV 662
Query: 663 AVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKS 722
AVADSIP VLADLGSL+ A+ + S LTLYLVVAVAAVSCVFLAFV +LLAL+LRRWHKS
Sbjct: 663 AVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKS 722
Query: 723 RLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQ 782
RLL A G L G PASHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIF QP+YAD L+S+
Sbjct: 723 RLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISR 782
Query: 783 ESFEKSEPLLLSGDSVFSKDSHGL 806
ES EKSEPLL++ D + +K L
Sbjct: 783 ESCEKSEPLLITQDLLETKGDPNL 806
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 1115 bits (2885), Expect = 0.0
Identities = 569/782 (72%), Positives = 652/782 (83%)
Query: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
L+L +LLGTL E G QIRYS+PEEL+KGS VG+I++DLGLEP+ELAERGVRI+ RGRT
Sbjct: 13 LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
QLFALNPRSGSLVTAGRIDREELC + C +N +IL+E+K+KIYGVEVE+ DINDN P
Sbjct: 73 QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
FR+ EL++K++ENAA R LP A D D+G NSL+SY+LS N HFSL V +G DG KYP
Sbjct: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
ELVL++ LDRE++ H L+LTA DGGDPV +GT IRV VLDANDNAP F EY SVP
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
EN+ +GT+LL++ ATDPDEG+N ++ YSFR ++K ++ F+LD N G IST+ LD+EES
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
FY MEV A D A AKV++TV DVNDNAPEV+LTSL SS+ E+ GT+IAL +V+
Sbjct: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
D DS ENG++ C I NLPFKLEKS NYY L+T LDRE+ YNIT+T D GTPPL
Sbjct: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
STE+HI L VAD NDNPP FPQASYS + ENNPRGVS+ SVTAHDPD +NA++TYSLA
Sbjct: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
E+T QGA LSSYVSINSDTGVLYAL SFDYEQ RDLQ+ V A D+G+PPLSSNVSLSLFV
Sbjct: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP +L
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
ADLGS+++P + E DLTLYLVVAVAAVSCVFLAFVI+LL LRLRRWHKSRLLQA G L
Sbjct: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
G PASHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+S+ES EKSEPLL
Sbjct: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
Query: 793 LS 794
+S
Sbjct: 793 MS 794
>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1107 bits (2863), Expect = 0.0
Identities = 567/784 (72%), Positives = 648/784 (82%)
Query: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
L+LL LLGTLWE G QIRYSVPEE +KGS VG+IS+DLGL+PR+LA+ GVRI+ RGRT
Sbjct: 13 LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
QLFALNPRSGSL+TAGRIDREELC + +C +N++ L+EDK K++GVE+E+ DINDN P
Sbjct: 73 QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
F+ +LE+KI+E A R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+ P
Sbjct: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
ELVL+RALDREE+AAHHLVLTASDGG P R+ T RI V VLD NDNAP F P YR V
Sbjct: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
EN+ GT+LL V A+DPDEG+N +V Y FR +++K +F+L+ N+G IS LD+EE
Sbjct: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
FY+ME+QA D R K+LI+V DVNDN PEV++TSL S V ENS GT+IA L+V+
Sbjct: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
DQDS +NGQV+C+ + NLPFKLEKS GNYY LVT LDRE V YNITV A+D GTPPL
Sbjct: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
STET I+L+VAD NDNPP FP ASYSAYI ENN RG S+ S+TAHDPD +ENAQ+TYS+
Sbjct: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQ+ V A D+G PPLSSN+SLSLFV
Sbjct: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP+VL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
+LGSL+ + S LTLYLVVAVAA+SCVFLAFV +LL LRLRRWHKSRLLQ SGG L
Sbjct: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
G PASHFVGV+ VQAFLQTYS EVSLT DSRKSHLIFPQPNYADML+SQE EK++ LL
Sbjct: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
Query: 793 LSGD 796
S D
Sbjct: 793 TSVD 796
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1103 bits (2852), Expect = 0.0
Identities = 566/775 (73%), Positives = 636/775 (82%)
Query: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
L+LL + L L E G I YSVPEE +KGS VG+I++DLGL+P+ELA+ GVRI+ RGR
Sbjct: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
LFALNPRSGSL+TA RIDREELC ++ C ++ +IL+EDK+K++ VEVE+ DINDN P
Sbjct: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
F+ ELE K++E R LP D D+G NSLQSY+LS N HFSL VQ GADG ++P
Sbjct: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
E+VL+ LDREE+A HHL+LTASDGG+PVR+GT RI + V+DANDN PAF Q +Y +VP
Sbjct: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
EN+ LGTQLL+VNATDPDEG N EV YSF VD + AQ+F+LD +G IS LD EE
Sbjct: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
Y MEVQA D AG A+ KVLI VLDVNDNAPEV +TS+ ++VPEN P GT+IAL++V+
Sbjct: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
DQDS +NG CFI GNLPFKLEK NYY LVT+ LDRE + YNIT+TA D+GTP L
Sbjct: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
STETHISL V D NDN PVF Q SYSAYIPENNPRG S+ SV AHD D ENAQITYSL
Sbjct: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
E+TIQGA LS+Y+SINSDTGVLYAL SFDYEQFRD+Q+KVMARD+G PPLSSNVSLSLF+
Sbjct: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
ADLGSLE A SDLTLYLVVA AAVSCVFLAFVI+LLA RLRRWHKSRLLQASGGGL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
P SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 1095 bits (2832), Expect = 0.0
Identities = 561/795 (70%), Positives = 643/795 (80%)
Query: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
LVLL LLG LWE +QIRYSVPEE EKG VG+IS+DL LEPRELAER VRI+ RGRT
Sbjct: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
QLF+LNPRSG+LVTAGRIDREELC + +C +N +L+ED+VK+YG+E+EV DIND+AP
Sbjct: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
F+ LE+KI+E A R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+ P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
ELVL+RALDREE AHHLVLTASDGG+P R+ T RI V VLD NDNAP FAQ YR V
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
EN+ GT LL A+D DEG+N +V Y F +++K + +F+L+ N+G IST LD+EE
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
FY+ME+QA D G KVLI+V DVNDN PEV +TSL S V E++P+GT+I L N +
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
D+DS +NGQV+C IQ NL F LE S +YY L+T +LDRE+ YNITVTATDRGTPPL
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
STE HI+L V D NDNPP F QASYS Y+PENN RG S+ SV A+DPD EN+++ YSLA
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
E+TIQG+ LS+YVSINSDTGVLYAL SFDYEQFRDLQ++V A D+G PPLSSNVSL LFV
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
ADLGSL+ PA+ E SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+ GL
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
G P SHFVGVDGV+AFLQTYS E SLT DSRKSHLIFPQPNYAD L+SQ+S EK+EPL
Sbjct: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
Query: 793 LSGDSVFSKDSHGLI 807
+S DS F + L+
Sbjct: 793 VSVDSKFPIEDTPLV 807
>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1086 bits (2808), Expect = 0.0
Identities = 555/777 (71%), Positives = 632/777 (81%)
Query: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
LVLL LL TLWE QIRYSV EE+++GS VG+I++DLGLEP LAE+GVRI+ RGR+
Sbjct: 13 LVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRS 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
QLFALNPRSGSLVTA RIDREELC + C LN +IL+EDK+ IY VEVE+ DINDNAP
Sbjct: 73 QLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPR 132
Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
F ELE+KISE R PL +A D D+G+N+LQ Y L+PN HFSL V+ GADG+KYP
Sbjct: 133 FGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYP 192
Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
ELVL+R+LDREE+A HHLVL ASDGGDPV +GT+RI V VLDANDNAP F QPEYR S+P
Sbjct: 193 ELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIP 252
Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
EN +GT++L V ATD DEG A+V Y + ++VF+L SG ++ I +LD+E++
Sbjct: 253 ENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDA 312
Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
F++++++A D G RAKV++TVLDVNDNAPE +TS SSV E+S GT+I L NV+
Sbjct: 313 TFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVH 372
Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
D+DS +N C + +LPFKLEKS NYY LVT LDREQ YNIT+TA D G P L
Sbjct: 373 DRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSL 432
Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
ST+ HI L VAD NDN P F + SYS YIPENNPRG S+ SVTAHDPD +NA +TYS A
Sbjct: 433 STDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFA 492
Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQV V+ARD+G+PPLSSNVSLSLFV
Sbjct: 493 EDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LLKAS
Sbjct: 553 LDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVAD IP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDIL 672
Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
ADLGSLE A SDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQASGG L
Sbjct: 673 ADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGSL 732
Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSE 789
TG +SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK +
Sbjct: 733 TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789
>gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precursor
[Homo sapiens]
Length = 929
Score = 954 bits (2467), Expect = 0.0
Identities = 498/925 (53%), Positives = 648/925 (70%), Gaps = 17/925 (1%)
Query: 14 VLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQ 73
VL +LL + T C IRYS+PEEL KGS VG++++DLGL +++ R +R+
Sbjct: 16 VLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARELRV--SAEKL 73
Query: 74 LFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYF 133
F+++ +SG L+ RIDRE++C +C+L L+ ++E+ + I+ V V + D+ND+AP F
Sbjct: 74 HFSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQF 133
Query: 134 RESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPE 193
R+ E+ ++ISE+ + M L A DPDI NSL Y+LSPN +FSL+ ++ DG KYPE
Sbjct: 134 RKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKDNPDGGKYPE 193
Query: 194 LVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPE 253
LVL++ LDRE ++AHHLVLTA DGGDP R+GTA+IR++V+DANDN P F+Q YR S+ E
Sbjct: 194 LVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSLRE 253
Query: 254 NLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEESG 313
++ GT +L V ATD DEG+N+E+ YSF V DKA VF LD +G I T LD EE
Sbjct: 254 DVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQQPLDFEEVE 313
Query: 314 FYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVND 373
Y + ++A D S R KV++ V+D NDN+PE+++TSL+ + E+SP G ++AL D
Sbjct: 314 RYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVALFKTRD 373
Query: 374 QDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPLS 433
QDS ENG+V C + +PFK+ S NYY LVTD LDREQ P YN+T+ ATDRG PPLS
Sbjct: 374 QDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAATDRGKPPLS 433
Query: 434 TETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAE 493
+ I+L++ D NDN PVF Q++Y ++PENN G S+ V+A DPD N +++YSL
Sbjct: 434 SSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYSLIA 493
Query: 494 NTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVL 553
+ ++ +LSSYVS+++ +GV++A +FD+EQ R ++ + ARD G P LS+NVSL + V
Sbjct: 494 SDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSANVSLRVLVG 553
Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
D+NDNAP +LYPAL DGS + PR+A+PGYLVTKVVAVD DSG NAWLSY +++ASE
Sbjct: 554 DRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQASE 613
Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 673
PGLFS+GL TGEVR RAL D+D+++Q L+VAV+D GQPPLSAT TL + ADS+ +VL
Sbjct: 614 PGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 673
Query: 674 DLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGLT 733
D +P++S+ +++ YLVVA+A +S +FL VIL +ALRLR+ L
Sbjct: 674 DFSDHPTPSDSQ-AEMQFYLVVALALISVLFLLAVILAIALRLRQSFSPTAGDCFESVLC 732
Query: 734 GAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADML----VSQESFEKSE 789
VG Y++ + D P+ N+ + +Q++ K
Sbjct: 733 SKSGP--VGPPNYSEGTLPYAYNFCVPGDQMN-----PEFNFFTSVDHCPATQDNLNKDS 785
Query: 790 PLLLS--GDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 847
LL S SV D L +QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM
Sbjct: 786 MLLASILTPSV-EADKKILKQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 844
Query: 848 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 907
LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA
Sbjct: 845 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 904
Query: 908 AGKRDGKAPAGGNGNKKKSGKKEKK 932
AGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 905 AGKRDGKAPAGGNGNKKKSGKKEKK 929
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 934 bits (2414), Expect = 0.0
Identities = 490/924 (53%), Positives = 642/924 (69%), Gaps = 13/924 (1%)
Query: 14 VLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQ 73
VLL LL QIRYS+PEEL K S VG++++DLGL R+L R +R+ +
Sbjct: 16 VLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRV--SAEKE 73
Query: 74 LFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYF 133
F +NP SG L+ + RIDRE++C C L+ D + E+ + I+ + V V+DINDN P F
Sbjct: 74 YFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLF 133
Query: 134 RESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPE 193
+++++ +KI E+ FPL A D D+G NSLQ Y L+ N +F L + DG KYPE
Sbjct: 134 KQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPE 193
Query: 194 LVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPE 253
L+LK +LDREE + H LVLTA DGGDP ++GT +IR+ V DANDN P F+Q YR ++ E
Sbjct: 194 LILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLRE 253
Query: 254 NLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEESG 313
++ G +L V ATD DEG+NAE+ YSF VD++ F L+ +G I+T +LD E +
Sbjct: 254 DVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIAS 313
Query: 314 FYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVND 373
Y + ++A D +A + + +LD ND APEV++TS+++ +PE+SP GT+IAL+ D
Sbjct: 314 SYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRD 373
Query: 374 QDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPLS 433
+DS ENG+V C + GN F L+ S NYY LVTD LDRE++P YN+T+TATD G PPLS
Sbjct: 374 RDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLS 433
Query: 434 TETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAE 493
+ ++L+++D NDN PVF Q SY ++ ENNP G S+ ++A DPD + Q++YS+
Sbjct: 434 SSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVA 493
Query: 494 NTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVL 553
+ ++ + SYVS+++ +GV++A +FD+EQ R ++ + ARD G P LS+NVSL + V
Sbjct: 494 SDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 553
Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
D NDNAP +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 554 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 613
Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 673
PGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ +VL
Sbjct: 614 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 673
Query: 674 DLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGLT 733
DL P++ + + L YLVVA+A +S +F VIL ++LRLR +S GL+
Sbjct: 674 DLSDRREPSDPQ-AKLQFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGLS 732
Query: 734 GAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIF----PQPNYA-DMLVSQESFEKS 788
P + YS+ + + + S K+ F P+ A D++ S+E++
Sbjct: 733 SKPGPGV--LPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDLVCDNASWEQN 790
Query: 789 EPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 848
+G F+ D+ +++QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML
Sbjct: 791 TNHGAAG-VPFASDT--ILKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 847
Query: 849 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 908
QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA
Sbjct: 848 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 907
Query: 909 GKRDGKAPAGGNGNKKKSGKKEKK 932
GKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 908 GKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 929 bits (2402), Expect = 0.0
Identities = 504/946 (53%), Positives = 641/946 (67%), Gaps = 65/946 (6%)
Query: 14 VLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQ 73
VL LL C QIRY +PEE+ KGS VG+++ DLG +EL R +R+
Sbjct: 16 VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRV--SSEKP 73
Query: 74 LFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYF 133
F ++ SG L+ + R+DREE+C C L + + E+ + Y V VE+ DIND+ P F
Sbjct: 74 YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
Query: 134 RESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPE 193
++ E++ISE+A RF L A D DIG N+LQ+Y+LSP+ HFSLI + +DGSKYPE
Sbjct: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193
Query: 194 LVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPE 253
+VLK LDRE++ ++HL LTA D G P + TA+I V+V DANDNAP F+Q YR S+ E
Sbjct: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253
Query: 254 NLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQV--FKLDCNSGTISTIGELDHEE 311
N+ GT +L V ATD DEGVNAE+ +SF +A+Q+ F L+ N+G I+ + LD EE
Sbjct: 254 NVYPGTTVLQVTATDQDEGVNAEITFSF----SEASQITQFDLNSNTGEITVLNTLDFEE 309
Query: 312 SGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNV 371
Y + ++A D G A+ V + V+D NDNAPEV+ SL + + E++ GT IALL V
Sbjct: 310 VKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKV 369
Query: 372 NDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPP 431
D+DS NG+V C ++G++PFK+ S N Y LVTD VLDREQ P YNITVTATDRG PP
Sbjct: 370 RDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPP 429
Query: 432 LSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSL 491
LS+ + I+L++ D NDN PVF Q+SY ++ ENNP G S+ V A DPD N Q++Y +
Sbjct: 430 LSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCI 489
Query: 492 AENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLF 551
+ ++ LSSYVSI++++GV++A +FD+EQ R ++ + ARD G P LS+NVSL +
Sbjct: 490 MASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVL 549
Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
V D+NDNAP +LYPAL DGS ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+A
Sbjct: 550 VDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQA 609
Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQV 671
SEPGLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL + ADS+ +V
Sbjct: 610 SEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEV 669
Query: 672 LADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGG 731
L D+ P++ + ++L YLVVA+A +S +FL +IL +ALRLRR
Sbjct: 670 LPDITDRPDPSDLQ-AELQFYLVVALALISVLFLVAMILAIALRLRR------------- 715
Query: 732 LTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV----------- 780
+ +PAS G+ KS + P PNY++ +
Sbjct: 716 -SSSPASWSCFQPGLCV----------------KSESVVP-PNYSEGTLPYSYNLCVAHT 757
Query: 781 --SQESFEKSEPLLLSGDSVFSKDSHGLI------------EQAPPNTDWRFSQAQRPGT 826
++ +F K L SG + DS G + +QAPPNTDWRFSQAQRPGT
Sbjct: 758 GKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCNSSELTSHQQAPPNTDWRFSQAQRPGT 817
Query: 827 SGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQ 886
SGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQ
Sbjct: 818 SGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQ 877
Query: 887 HVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
HVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 878 HVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 923
>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
[Homo sapiens]
Length = 930
Score = 925 bits (2390), Expect = 0.0
Identities = 493/924 (53%), Positives = 632/924 (68%), Gaps = 14/924 (1%)
Query: 14 VLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQ 73
VL +LL + T IRYS+PEEL KGS VG++++DLGL +++ R +R+
Sbjct: 16 VLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRV--SAEKL 73
Query: 74 LFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYF 133
F+++ SG L+ RIDRE++C +C+L L+ ++E+ + I+ V V + D+ND+AP F
Sbjct: 74 HFSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQF 133
Query: 134 RESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPE 193
+ E+ ++I E+A+ R L A DPDI NS++ Y+++ N +FSL+V+ +DG KYPE
Sbjct: 134 DKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYPE 193
Query: 194 LVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPE 253
L L++ LDREE+ +H L+LTA DGGDP R+ TA I + V D NDN P F++ EYR S+ E
Sbjct: 194 LSLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISLSE 253
Query: 254 NLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEESG 313
NL G+ +L V ATD DEGVNAE+ Y FR +F LD +G I D E+
Sbjct: 254 NLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDVE 313
Query: 314 FYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVND 373
Y MEV+A D G S + KV+I +LD NDN+PE+++TSL+ + ENSP G ++AL D
Sbjct: 314 RYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTRD 373
Query: 374 QDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPLS 433
D NG+V C I+ ++PFK+ S NYY LVTD LDREQ P YN+T+ ATDRG PPLS
Sbjct: 374 LDFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPPLS 433
Query: 434 TETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAE 493
+ I+L VAD NDN PVF Q SY ++ ENNP G S+ V+A DPD N I+YS+
Sbjct: 434 SSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIVA 493
Query: 494 NTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVL 553
+ ++ ++SSYVS+++ +GV++A +FD+EQ R + + ARD+G P LS+NVSL + V
Sbjct: 494 SDLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLVG 553
Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
D+NDNAP +LYPAL DGS ++ PRSAEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 554 DRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 613
Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 673
PGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + AD++ ++L
Sbjct: 614 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEILP 673
Query: 674 DLGSLESPANSE-TSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
DL + P S+ ++L YLVVA+A +S +FL VIL +ALRLRR GL
Sbjct: 674 DLS--DRPVLSDPQAELQFYLVVALALISVLFLLAVILAIALRLRRSLSPATWDCFHPGL 731
Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLT-TDSRKSHLI---FPQPNYADMLVSQESFEKS 788
S V YS+ + + T +++ + + P + DM+ S
Sbjct: 732 --CVKSGPVVPPNYSEGTLPYSYNLCIAHTGTKEFNFLKCSVPLHSNEDMVCSVSPGALI 789
Query: 789 EPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 848
P G + L QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML
Sbjct: 790 PP---HGGEDLTSHPETLTSQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 846
Query: 849 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 908
QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA
Sbjct: 847 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 906
Query: 909 GKRDGKAPAGGNGNKKKSGKKEKK 932
GKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 907 GKRDGKAPAGGNGNKKKSGKKEKK 930
>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 923 bits (2386), Expect = 0.0
Identities = 500/933 (53%), Positives = 626/933 (67%), Gaps = 39/933 (4%)
Query: 14 VLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQ 73
VL LL C QIRY +PEE+ KGS VG+++ DLG +EL R +R+
Sbjct: 16 VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRV--SSEKP 73
Query: 74 LFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYF 133
F ++ SG L+ + R+DREE+C C L + + E+ + Y V VE+ DIND+ P F
Sbjct: 74 YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
Query: 134 RESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPE 193
++ E++ISE+A RF L A D DIG NSLQ Y+LS N FSLI++ DGSKYPE
Sbjct: 134 TQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPE 193
Query: 194 LVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPE 253
L L++ LDRE+++ H LVLTA DGG P +GT +R+ V DANDN P F + YR S+ E
Sbjct: 194 LALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRE 253
Query: 254 NLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEESG 313
N+ GT +L V+ATD DEG+N+E+ YSF + Q+F L+ SG I+T +LD EE+
Sbjct: 254 NVPPGTTVLQVSATDQDEGINSEITYSFY----RTGQIFSLNSKSGEITTQKKLDFEETK 309
Query: 314 FYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVND 373
Y M V+ D G A+ V I + D NDN+PEV SL + EN+ GTLIAL+ ++D
Sbjct: 310 EYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHD 369
Query: 374 QDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPLS 433
QDS ENG+V C +QG +PFK+ S N Y LVTD LDREQ P YN+T+TATDRG PPLS
Sbjct: 370 QDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLS 429
Query: 434 TETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAE 493
+ + L++ D NDN PVF QASY +PENNP G S+ V A D D N Q++YS+
Sbjct: 430 SSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMA 489
Query: 494 NTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVL 553
+ ++ +L+SYVS+++ +GV++A +FDYEQ R ++ + ARD G P LS+NVSL + V
Sbjct: 490 SDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVG 549
Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
D+NDNAP +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 550 DRNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 673
PGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ +VL
Sbjct: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 669
Query: 674 DLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGLT 733
D+ P++ + ++L YLVVA+A +S +FL VIL +ALRLRR GL
Sbjct: 670 DITDRPVPSDPQ-AELQFYLVVALALISVLFLLAVILAVALRLRRSSSPAAWSCFQPGLC 728
Query: 734 GAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLLL 793
+ V + Q L YS+ + + + ++ +F K L
Sbjct: 729 -VKSGPVVPPNYSQGTL-PYSYNLCVAHTGK----------------TEFNFLKCSEQLS 770
Query: 794 SGDSVFSKDSHGLI--------------EQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP 839
SG + DS G + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP
Sbjct: 771 SGQDILCGDSSGALFPLCNSSESTSHPELQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP 830
Query: 840 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG 899
NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG
Sbjct: 831 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG 890
Query: 900 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 891 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 923
>gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precursor
[Homo sapiens]
Length = 929
Score = 922 bits (2384), Expect = 0.0
Identities = 495/931 (53%), Positives = 642/931 (68%), Gaps = 29/931 (3%)
Query: 14 VLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQ 73
+L LL L + IRY++PEEL++GS VG++++DLG +L R +R+I +
Sbjct: 16 MLFLFLLSLLDQVLSEPIRYAIPEELDRGSLVGNLAKDLGFGVGDLPTRNLRVI--AEKK 73
Query: 74 LFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYF 133
F ++P +G+L+ + RIDREE+C C L +++ E + + V V ++DINDN P F
Sbjct: 74 FFTVSPENGNLLVSDRIDREEICGKKSTCVLEFEMVAEKPLNFFHVTVLIQDINDNPPTF 133
Query: 134 RESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPE 193
++ E++ISE A T F L A DPD+G NSLQ Y LSP+ HFSLI + DGS+YPE
Sbjct: 134 SQNITELEISELALTGATFALESAQDPDVGVNSLQQYYLSPDPHFSLIQKENLDGSRYPE 193
Query: 194 LVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPE 253
LVLK LDREE+ HHLVLTA DGG+P R+ T +IRV+V DANDN P F Q YR +V E
Sbjct: 194 LVLKAPLDREEQPHHHLVLTAVDGGEPSRSCTTQIRVIVADANDNPPVFTQDMYRVNVAE 253
Query: 254 NLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEESG 313
NL G+ +L V A D DEG+NAE+ Y+F + + Q+FKLD +G ++TIGELD EE
Sbjct: 254 NLPAGSSVLKVMAIDMDEGINAEIIYAFINIGKEVRQLFKLDSKTGELTTIGELDFEERD 313
Query: 314 FYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVND 373
Y + V+A D ++A KV I + D NDNAPE+ L S + + E++ GT +AL+ +D
Sbjct: 314 SYTIGVEAKDGGHHTAYCKVQIDISDENDNAPEITLASESQHIQEDAELGTAVALIKTHD 373
Query: 374 QDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPLS 433
DS NG+++C ++GN PFK+ + N Y LVTD LDREQ+P YN+T+TATD+G PPLS
Sbjct: 374 LDSGFNGEILCQLKGNFPFKIVQDTKNTYRLVTDGALDREQIPEYNVTITATDKGNPPLS 433
Query: 434 TETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAE 493
+ I+L++ D NDN PVF QASY+ ++ ENNP G S+ V A DPD N ++Y +
Sbjct: 434 SSKTITLHILDVNDNVPVFHQASYTVHVAENNPPGASIAHVRASDPDLGPNGLVSYYIVA 493
Query: 494 NTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVL 553
+ ++ LSSYVS+++ +GV++A +FD+EQ R ++ + ARD G P LS+NVSL + V
Sbjct: 494 SDLEPRELSSYVSVSARSGVVFAQRAFDHEQLRAFELTLQARDQGSPTLSANVSLRVLVD 553
Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
D+NDNAP +LYPAL +GS ++ PRSAEPGYLVTKVVAVD DSG NAWLSY +++ASE
Sbjct: 554 DRNDNAPLVLYPALGPEGSALFDMVPRSAEPGYLVTKVVAVDADSGYNAWLSYHIVQASE 613
Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 673
PGLFS+GL TGEVRTAR L DR+A +Q L+V V+D GQ PLSATV L + ADS+ ++
Sbjct: 614 PGLFSLGLRTGEVRTARTLGDREAARQRLLVTVRDGGQQPLSATVMLHLIFADSLQEIQP 673
Query: 674 DLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGLT 733
DL +P++ + ++L +LVVA+A +S +FL VIL ++LRLR + A+ G
Sbjct: 674 DLSDRPTPSDPQ-AELQFHLVVALALISVLFLLAVILAISLRLRCSSR----PATEGYF- 727
Query: 734 GAPASHFVGVDGVQAFLQTYSHE----------VSLTTDSRKSHLIFPQPNYA--DMLVS 781
P F V GV L TYS S ++++ L N A D+L
Sbjct: 728 -QPGVCFKTVPGV---LPTYSERTLPYSYNPCAASHSSNTEFKFLNIKAENAAPQDLLCD 783
Query: 782 QESFEKSEPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 841
+ S+ +S + + +S L +QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
Sbjct: 784 EASWFES-----NDNPEMPSNSGNLQKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 838
Query: 842 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 901
QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
Sbjct: 839 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 898
Query: 902 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 899 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 929
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,365,427
Number of Sequences: 37866
Number of extensions: 1611712
Number of successful extensions: 10079
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 3142
Number of HSP's gapped (non-prelim): 608
length of query: 932
length of database: 18,247,518
effective HSP length: 112
effective length of query: 820
effective length of database: 14,006,526
effective search space: 11485351320
effective search space used: 11485351320
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.