BLASTP matches in selected species for COL6A1 - GI:87196339

The following table provides the supporting data for the comparative genomics plot for this protein. Select the protein identifier to see the matching RefSeq entry at NCBI. Searches at NCBI may reflect newer proteins sets or multiple strains of that species.

Species          Protein        Score Size(aa) Description

Self-match       87196339        2122   1028   collagen, type VI, alpha 1 precursor
M. musculus      6753484         1932   1025   collagen, type VI, alpha 1 
D. rerio         125829720       1115   1000   PREDICTED: collagen, type VI, alpha 1...
C. intestinalis  74096275         288    734   collagen type IX-like 
S. purpuratus    47551001         308   1414   alpha-1 collagen 
D. melanogaster  24581820         270   1779   Collagen type IV CG4145-PA, isoform A...
C. elegans       71992048         290    660   COLlagen family member (col-135) 
A. thaliana      30695026          85    290   glycine-rich protein 
S. cerevisiae    42742305          48    199   Protein of unknown function; may inte...
E. coli          89110843          28    548   anaerobic class I fumarate hydratase ...
A. pernix        118431835         33    165   hypothetical protein APE_2335.1 

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Search results were obtained with NCBI BLAST and RefSeq entries.

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