Guide to the Human Genome
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Name: TTPAL Sequence: fasta or formatted (342aa) NCBI GI: 85861243
Description:

tocopherol (alpha) transfer protein-like

Referenced in:

Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Other entries for this name:
alt mRNA [342aa] tocopherol (alpha) transfer protein-like
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         22           1
 C cysteine            2.3          8           1
 D aspartate           6.1         21           2
 E glutamate           6.7         23           2
 F phenylalanine       4.4         15           2
 G glycine             4.4         15           2
 H histidine           2.0          7           1
 I isoleucine          5.8         20           2
 K lysine              5.6         19           2
 L leucine            12.3         42           2
 M methionine          0.6          2           1
 N asparagine          3.8         13           2
 P proline             7.3         25           4
 Q glutamine           2.9         10           1
 R arginine            6.1         21           2
 S serine              8.2         28           1
 T threonine           4.4         15           1
 V valine              6.4         22           2
 W tryptophan          1.2          4           1
 Y tyrosine            2.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tocopherol (alpha) transfer protein-like 
TTPAL                 1.000   tocopherol (alpha) transfer protein-like 
RLBP1L1               0.238   retinaldehyde binding protein 1-like 1 
RLBP1L2               0.237   retinaldehyde binding protein 1-like 2 
RLBP1                 0.219   retinaldehyde binding protein 1 
TTPA                  0.205   tocopherol (alpha) transfer protein 
PTPN9                 0.112   protein tyrosine phosphatase, non-receptor type 9 [Ho...
SEC14L3               0.055   SEC14-like 3 
SEC14L4               0.051   SEC14p-like protein TAP3 isoform b 
SEC14L4               0.051   SEC14p-like protein TAP3 isoform a 
LOC730005             0.045   PREDICTED: similar to SEC14p-like protein TAP3 [Hom...
SEC14L2               0.045   SEC14-like 2 isoform 2 
SEC14L2               0.045   SEC14-like 2 isoform 1 
LOC730005             0.043   PREDICTED: similar to SEC14p-like protein TAP3 [Hom...
LOC730005             0.043   PREDICTED: similar to SEC14p-like protein TAP3 [Hom...
SEC14L5               0.031   SEC14-like 5 
SEC14L1               0.030   SEC14 (S. cerevisiae)-like 1 isoform c 
SEC14L1               0.030   SEC14 (S. cerevisiae)-like 1 isoform a 
SEC14L1               0.030   SEC14 (S. cerevisiae)-like 1 isoform a 
SEC14L1               0.030   SEC14 (S. cerevisiae)-like 1 isoform b 
SEC14L1               0.030   SEC14 (S. cerevisiae)-like 1 isoform a 
KLHL6                 0.012   kelch-like 6 
ATCAY                 0.010   caytaxin 
CBR3                  0.010   carbonyl reductase 3 
GATAD2A               0.010   GATA zinc finger domain containing 2A 
LOC100288635          0.009   PREDICTED: hypothetical protein 
LOC100288635          0.009   PREDICTED: hypothetical protein XP_002343184 
REPS1                 0.009   RALBP1 associated Eps domain containing 1 isoform a...
REPS1                 0.009   RALBP1 associated Eps domain containing 1 isoform b...
APBB1IP               0.007   amyloid beta (A4) precursor protein-binding, family ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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